RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 PODXL2Q9NZ53 605 aa24.32■■□□□ 1.48
ABCA3-204ENST00000566200 H7C1D1 291 aa24.31■■□□□ 1.48
ABCA3-204ENST00000566200 AOC2O75106 756 aa24.31■■□□□ 1.48
ABCA3-204ENST00000566200 CCDC30Q5VVM6 783 aa24.31■■□□□ 1.48
ABCA3-204ENST00000566200 DLK2Q6UY11 383 aa24.31■■□□□ 1.48
ABCA3-204ENST00000566200 CWC25Q9NXE8 425 aaPredicted RBP24.31■■□□□ 1.48
ABCA3-204ENST00000566200 PDE8AO60658 829 aa24.3■■□□□ 1.48
ABCA3-204ENST00000566200 CDC37L1Q7L3B6 337 aa24.3■■□□□ 1.48
ABCA3-204ENST00000566200 TSR2Q969E8 191 aaKnown RBP24.3■■□□□ 1.48
ABCA3-204ENST00000566200 EYA3Q99504 573 aa24.3■■□□□ 1.48
ABCA3-204ENST00000566200 POLR2AP24928 1970 aaKnown RBP24.29■■□□□ 1.48
ABCA3-204ENST00000566200 PSME4Q14997 1843 aa24.29■■□□□ 1.48
ABCA3-204ENST00000566200 TBC1D10BQ4KMP7 808 aaPredicted RBP24.29■■□□□ 1.48
ABCA3-204ENST00000566200 CCDC85AQ96PX6 553 aaPredicted RBP24.29■■□□□ 1.48
ABCA3-204ENST00000566200 MAP3K2Q9Y2U5 619 aa24.29■■□□□ 1.48
ABCA3-204ENST00000566200 IGKV5-2P06315 115 aa24.28■■□□□ 1.48
ABCA3-204ENST00000566200 CCDC152Q4G0S7 254 aa24.28■■□□□ 1.48
ABCA3-204ENST00000566200 USP48Q86UV5 1035 aa24.28■■□□□ 1.48
ABCA3-204ENST00000566200 ZNF408Q9H9D4 720 aa24.28■■□□□ 1.48
ABCA3-204ENST00000566200 SPEF2Q9C093 1822 aa24.27■■□□□ 1.48
ABCA3-204ENST00000566200 UFL1O94874 794 aa24.27■■□□□ 1.48
ABCA3-204ENST00000566200 DDX58O95786 925 aaKnown RBP24.27■■□□□ 1.48
ABCA3-204ENST00000566200 RPS12P25398 132 aaKnown RBP24.27■■□□□ 1.48
ABCA3-204ENST00000566200 HHIPL1Q96JK4 782 aa24.27■■□□□ 1.48
ABCA3-204ENST00000566200 MYH3P11055 1940 aa24.27■■□□□ 1.48
ABCA3-204ENST00000566200 HSP90B1P14625 803 aaKnown RBP24.26■■□□□ 1.47
ABCA3-204ENST00000566200 MAP2K2P36507 400 aa24.26■■□□□ 1.47
ABCA3-204ENST00000566200 ZC3H12CQ9C0D7 883 aaKnown RBP24.26■■□□□ 1.47
ABCA3-204ENST00000566200 PI4KAP2A4QPH2 592 aa24.25■■□□□ 1.47
ABCA3-204ENST00000566200 VIL1P09327 827 aaKnown RBP24.25■■□□□ 1.47
ABCA3-204ENST00000566200 CCDC27Q2M243 656 aa24.25■■□□□ 1.47
ABCA3-204ENST00000566200 KSR2Q6VAB6 950 aa24.25■■□□□ 1.47
ABCA3-204ENST00000566200 WWC1Q8IX03 1113 aa24.25■■□□□ 1.47
ABCA3-204ENST00000566200 PI4KAP1Q8N8J0 262 aa24.25■■□□□ 1.47
ABCA3-204ENST00000566200 ANKIB1Q9P2G1 1089 aa24.25■■□□□ 1.47
ABCA3-204ENST00000566200 GGA1Q9UJY5 639 aa24.25■■□□□ 1.47
ABCA3-204ENST00000566200 G2E3Q7L622 706 aa24.24■■□□□ 1.47
ABCA3-204ENST00000566200 WTIPA6NIX2 430 aaPredicted RBP24.23■■□□□ 1.47
ABCA3-204ENST00000566200 CTSWP56202 376 aa24.23■■□□□ 1.47
ABCA3-204ENST00000566200 RBM26Q5T8P6 1007 aaKnown RBP24.23■■□□□ 1.47
ABCA3-204ENST00000566200 TSKSQ9UJT2 592 aa24.23■■□□□ 1.47
ABCA3-204ENST00000566200 ZNF609O15014 1411 aa24.23■■□□□ 1.47
ABCA3-204ENST00000566200 ZNF646O15015 1829 aaPredicted RBP24.23■■□□□ 1.47
ABCA3-204ENST00000566200 ASTN2O75129 1339 aaPredicted RBP24.22■■□□□ 1.47
ABCA3-204ENST00000566200 ADM5C9JUS6 153 aa24.22■■□□□ 1.47
ABCA3-204ENST00000566200 CWF19L2Q2TBE0 894 aaKnown RBP24.22■■□□□ 1.47
ABCA3-204ENST00000566200 KRT26Q7Z3Y9 468 aa24.22■■□□□ 1.47
ABCA3-204ENST00000566200 ANKRD18AQ8IVF6 992 aa24.22■■□□□ 1.47
ABCA3-204ENST00000566200 CHMP4AQ9BY43 222 aa24.22■■□□□ 1.47
ABCA3-204ENST00000566200 XDHP47989 1333 aa24.21■■□□□ 1.47
ABCA3-204ENST00000566200 KIF4BQ2VIQ3 1234 aa24.21■■□□□ 1.47
ABCA3-204ENST00000566200 TWISTNBQ3B726 338 aaPredicted RBP24.21■■□□□ 1.47
ABCA3-204ENST00000566200 TTLL11Q8NHH1 800 aa24.21■■□□□ 1.47
ABCA3-204ENST00000566200 ZIC5Q96T25 663 aa24.21■■□□□ 1.47
ABCA3-204ENST00000566200 BEGAINQ9BUH8 593 aa24.21■■□□□ 1.47
ABCA3-204ENST00000566200 NEURL1BA8MQ27 555 aa24.19■■□□□ 1.46
ABCA3-204ENST00000566200 STK31Q9BXU1 1019 aa24.19■■□□□ 1.46
ABCA3-204ENST00000566200 GREM2Q9H772 168 aa24.19■■□□□ 1.46
ABCA3-204ENST00000566200 IL16Q14005 1332 aa24.18■■□□□ 1.46
ABCA3-204ENST00000566200 G3V3G9 751 aa24.18■■□□□ 1.46
ABCA3-204ENST00000566200 BRPF1P55201 1214 aaPredicted RBP24.18■■□□□ 1.46
ABCA3-204ENST00000566200 HUNKP57058 714 aa24.18■■□□□ 1.46
ABCA3-204ENST00000566200 ZNF280AP59817 542 aaPredicted RBP24.18■■□□□ 1.46
ABCA3-204ENST00000566200 DCAF8Q5TAQ9 597 aa24.18■■□□□ 1.46
ABCA3-204ENST00000566200 RSBN1LQ6PCB5 846 aaPredicted RBP24.18■■□□□ 1.46
ABCA3-204ENST00000566200 DCPSQ96C86 337 aaKnown RBP24.18■■□□□ 1.46
ABCA3-204ENST00000566200 ABHD8Q96I13 439 aa24.18■■□□□ 1.46
ABCA3-204ENST00000566200 GMLQ99445 158 aa24.18■■□□□ 1.46
ABCA3-204ENST00000566200 GGA3Q9NZ52 723 aa24.18■■□□□ 1.46
ABCA3-204ENST00000566200 SLC4A2P04920 1241 aa24.17■■□□□ 1.46
ABCA3-204ENST00000566200 ATP2B4P23634 1241 aa24.17■■□□□ 1.46
ABCA3-204ENST00000566200 MINPP1Q9UNW1 487 aa24.17■■□□□ 1.46
ABCA3-204ENST00000566200 FAM155AB1AL88 458 aaPredicted RBP24.16■■□□□ 1.46
ABCA3-204ENST00000566200 H7C1W4 665 aa24.16■■□□□ 1.46
ABCA3-204ENST00000566200 NEXNQ0ZGT2 675 aa24.16■■□□□ 1.46
ABCA3-204ENST00000566200 AGBL3Q8NEM8 1001 aa24.16■■□□□ 1.46
ABCA3-204ENST00000566200 CDC5LQ99459 802 aaKnown RBP24.16■■□□□ 1.46
ABCA3-204ENST00000566200 GBA2Q9HCG7 927 aaPredicted RBP24.16■■□□□ 1.46
ABCA3-204ENST00000566200 BSDC1Q9NW68 430 aaPredicted RBP24.16■■□□□ 1.46
ABCA3-204ENST00000566200 UBE3BQ7Z3V4 1068 aa24.15■■□□□ 1.46
ABCA3-204ENST00000566200 MED23Q9ULK4 1368 aa24.15■■□□□ 1.46
ABCA3-204ENST00000566200 CASP7P55210 303 aa24.14■■□□□ 1.45
ABCA3-204ENST00000566200 NOGQ13253 232 aa24.14■■□□□ 1.45
ABCA3-204ENST00000566200 NCBP3Q53F19 620 aaKnown RBP24.14■■□□□ 1.45
ABCA3-204ENST00000566200 PODNQ7Z5L7 613 aa24.14■■□□□ 1.45
ABCA3-204ENST00000566200 FANCIQ9NVI1 1328 aa24.13■■□□□ 1.45
ABCA3-204ENST00000566200 CACNA1FO60840 1977 aa24.13■■□□□ 1.45
ABCA3-204ENST00000566200 CASP8AP2Q9UKL3 1982 aa24.13■■□□□ 1.45
ABCA3-204ENST00000566200 CA12O43570 354 aa24.13■■□□□ 1.45
ABCA3-204ENST00000566200 FLIIQ13045 1269 aa24.13■■□□□ 1.45
ABCA3-204ENST00000566200 GCKRQ14397 625 aa24.13■■□□□ 1.45
ABCA3-204ENST00000566200 RGMBQ6NW40 437 aa24.13■■□□□ 1.45
ABCA3-204ENST00000566200 USP17L3A6NCW0 530 aa24.12■■□□□ 1.45
ABCA3-204ENST00000566200 USP17L4A6NCW7 530 aa24.12■■□□□ 1.45
ABCA3-204ENST00000566200 CCT4P50991 539 aaKnown RBP24.12■■□□□ 1.45
ABCA3-204ENST00000566200 SCARF1Q14162 830 aa24.12■■□□□ 1.45
ABCA3-204ENST00000566200 ANGEL2Q5VTE6 544 aaKnown RBP24.12■■□□□ 1.45
ABCA3-204ENST00000566200 USP17L1Q7RTZ2 530 aa24.12■■□□□ 1.45
ABCA3-204ENST00000566200 SULF1Q8IWU6 871 aa24.12■■□□□ 1.45
ABCA3-204ENST00000566200 C2orf69Q8N8R5 385 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms