RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 KCNQ5Q9NR82 932 aa16.69■□□□□ 0.26
RNF40-208ENST00000565995 PODXL2Q9NZ53 605 aa16.69■□□□□ 0.26
RNF40-208ENST00000565995 SPEF2Q9C093 1822 aa16.68■□□□□ 0.26
RNF40-208ENST00000565995 TBC1D16Q8TBP0 767 aa16.68■□□□□ 0.26
RNF40-208ENST00000565995 NECTIN2Q92692 538 aa16.68■□□□□ 0.26
RNF40-208ENST00000565995 FAM89AQ96GI7 184 aa16.68■□□□□ 0.26
RNF40-208ENST00000565995 RNF186Q9NXI6 227 aa16.68■□□□□ 0.26
RNF40-208ENST00000565995 CHPF2Q9P2E5 772 aa16.68■□□□□ 0.26
RNF40-208ENST00000565995 C6orf229H3BNL8 230 aa16.67■□□□□ 0.26
RNF40-208ENST00000565995 RIMBP2O15034 1052 aa16.67■□□□□ 0.26
RNF40-208ENST00000565995 SLC10A3P09131 477 aa16.67■□□□□ 0.26
RNF40-208ENST00000565995 ZNF157P51786 506 aaPredicted RBP16.67■□□□□ 0.26
RNF40-208ENST00000565995 RPS8P62241 208 aaKnown RBP16.67■□□□□ 0.26
RNF40-208ENST00000565995 CSRNP1Q96S65 589 aa16.67■□□□□ 0.26
RNF40-208ENST00000565995 DBF4Q9UBU7 674 aaPredicted RBP16.67■□□□□ 0.26
RNF40-208ENST00000565995 ADM5C9JUS6 153 aa16.66■□□□□ 0.26
RNF40-208ENST00000565995 ZNF280AP59817 542 aaPredicted RBP16.66■□□□□ 0.26
RNF40-208ENST00000565995 KRT24Q2M2I5 525 aa16.66■□□□□ 0.26
RNF40-208ENST00000565995 CFAP44Q96MT7 982 aa16.66■□□□□ 0.26
RNF40-208ENST00000565995 TRPA1O75762 1119 aa16.65■□□□□ 0.26
RNF40-208ENST00000565995 DOK7Q18PE1 504 aa16.65■□□□□ 0.26
RNF40-208ENST00000565995 KIF4BQ2VIQ3 1234 aa16.65■□□□□ 0.26
RNF40-208ENST00000565995 ZC3H12CQ9C0D7 883 aaKnown RBP16.65■□□□□ 0.26
RNF40-208ENST00000565995 HYPKQ9NX55 129 aa16.65■□□□□ 0.26
RNF40-208ENST00000565995 TRIM35Q9UPQ4 493 aa16.65■□□□□ 0.26
RNF40-208ENST00000565995 ECM29Q5VYK3 1845 aa16.65■□□□□ 0.26
RNF40-208ENST00000565995 CACNA1FO60840 1977 aa16.64■□□□□ 0.25
RNF40-208ENST00000565995 ATP5J2-PTCD1G3V325 749 aa16.64■□□□□ 0.25
RNF40-208ENST00000565995 FKBP1BP68106 108 aa16.64■□□□□ 0.25
RNF40-208ENST00000565995 RALBP1Q15311 655 aa16.64■□□□□ 0.25
RNF40-208ENST00000565995 RBM26Q5T8P6 1007 aaKnown RBP16.64■□□□□ 0.25
RNF40-208ENST00000565995 SULF1Q8IWU6 871 aa16.64■□□□□ 0.25
RNF40-208ENST00000565995 AGBL3Q8NEM8 1001 aa16.64■□□□□ 0.25
RNF40-208ENST00000565995 IRS4O14654 1257 aaPredicted RBP16.63■□□□□ 0.25
RNF40-208ENST00000565995 HDGFL1Q5TGJ6 251 aa16.63■□□□□ 0.25
RNF40-208ENST00000565995 CDCA5Q96FF9 252 aa16.63■□□□□ 0.25
RNF40-208ENST00000565995 GMLQ99445 158 aa16.63■□□□□ 0.25
RNF40-208ENST00000565995 PITPNM2Q9BZ72 1349 aa16.63■□□□□ 0.25
RNF40-208ENST00000565995 HSP90B1P14625 803 aaKnown RBP16.62■□□□□ 0.25
RNF40-208ENST00000565995 ZBTB38Q8NAP3 1195 aaPredicted RBP16.62■□□□□ 0.25
RNF40-208ENST00000565995 GGA3Q9NZ52 723 aa16.62■□□□□ 0.25
RNF40-208ENST00000565995 SCARF1Q14162 830 aa16.61■□□□□ 0.25
RNF40-208ENST00000565995 RSBN1LQ6PCB5 846 aaPredicted RBP16.61■□□□□ 0.25
RNF40-208ENST00000565995 CTU1Q7Z7A3 348 aaKnown RBP16.61■□□□□ 0.25
RNF40-208ENST00000565995 RASAL3Q86YV0 1011 aa16.61■□□□□ 0.25
RNF40-208ENST00000565995 ASTN2O75129 1339 aaPredicted RBP16.61■□□□□ 0.25
RNF40-208ENST00000565995 ZNF428Q96B54 188 aa16.6■□□□□ 0.25
RNF40-208ENST00000565995 RUNDC1Q96C34 613 aa16.6■□□□□ 0.25
RNF40-208ENST00000565995 SEC31BQ9NQW1 1179 aa16.6■□□□□ 0.25
RNF40-208ENST00000565995 GGA1Q9UJY5 639 aa16.6■□□□□ 0.25
RNF40-208ENST00000565995 RBBP6Q7Z6E9 1792 aaKnown RBP16.59■□□□□ 0.25
RNF40-208ENST00000565995 PKN2Q16513 984 aaKnown RBP16.59■□□□□ 0.25
RNF40-208ENST00000565995 NOM1Q5C9Z4 860 aaKnown RBP16.59■□□□□ 0.25
RNF40-208ENST00000565995 ANGEL2Q5VTE6 544 aaKnown RBP16.59■□□□□ 0.25
RNF40-208ENST00000565995 PODNQ7Z5L7 613 aa16.59■□□□□ 0.25
RNF40-208ENST00000565995 UFL1O94874 794 aa16.58■□□□□ 0.24
RNF40-208ENST00000565995 PCCAP05165 728 aaPredicted RBP16.58■□□□□ 0.24
RNF40-208ENST00000565995 ZNF853P0CG23 659 aa16.58■□□□□ 0.24
RNF40-208ENST00000565995 SOX10P56693 466 aa16.58■□□□□ 0.24
RNF40-208ENST00000565995 NEUROD2Q15784 382 aa16.58■□□□□ 0.24
RNF40-208ENST00000565995 RTL5Q5HYW3 569 aaPredicted RBP16.58■□□□□ 0.24
RNF40-208ENST00000565995 DUSP27Q5VZP5 1158 aa16.58■□□□□ 0.24
RNF40-208ENST00000565995 CCDC191Q8NCU4 936 aa16.58■□□□□ 0.24
RNF40-208ENST00000565995 MYOZ2Q9NPC6 264 aa16.58■□□□□ 0.24
RNF40-208ENST00000565995 ANKIB1Q9P2G1 1089 aa16.58■□□□□ 0.24
RNF40-208ENST00000565995 XDHP47989 1333 aa16.57■□□□□ 0.24
RNF40-208ENST00000565995 PDE8AO60658 829 aa16.57■□□□□ 0.24
RNF40-208ENST00000565995 USP17L8P0C7I0 530 aa16.57■□□□□ 0.24
RNF40-208ENST00000565995 TM4SF4P48230 202 aa16.57■□□□□ 0.24
RNF40-208ENST00000565995 CCDC152Q4G0S7 254 aa16.57■□□□□ 0.24
RNF40-208ENST00000565995 LAS1LQ9Y4W2 734 aaKnown RBP16.57■□□□□ 0.24
RNF40-208ENST00000565995 G3V3G9 751 aa16.56■□□□□ 0.24
RNF40-208ENST00000565995 MMP14P50281 582 aa16.56■□□□□ 0.24
RNF40-208ENST00000565995 DCAF8Q5TAQ9 597 aa16.56■□□□□ 0.24
RNF40-208ENST00000565995 RIC3Q7Z5B4 369 aa16.56■□□□□ 0.24
RNF40-208ENST00000565995 CCDC146Q8IYE0 955 aa16.56■□□□□ 0.24
RNF40-208ENST00000565995 A0A1B0GUL6 1792 aa16.56■□□□□ 0.24
RNF40-208ENST00000565995 USP17L3A6NCW0 530 aa16.55■□□□□ 0.24
RNF40-208ENST00000565995 USP17L4A6NCW7 530 aa16.55■□□□□ 0.24
RNF40-208ENST00000565995 ATP2B4P23634 1241 aa16.55■□□□□ 0.24
RNF40-208ENST00000565995 PRPF38BQ5VTL8 546 aaKnown RBP16.55■□□□□ 0.24
RNF40-208ENST00000565995 USP17L1Q7RTZ2 530 aa16.55■□□□□ 0.24
RNF40-208ENST00000565995 CFHR5Q9BXR6 569 aa16.55■□□□□ 0.24
RNF40-208ENST00000565995 PHAXQ9H814 394 aaKnown RBP16.55■□□□□ 0.24
RNF40-208ENST00000565995 MBIPQ9NS73 344 aa16.55■□□□□ 0.24
RNF40-208ENST00000565995 HPS5Q9UPZ3 1129 aa16.55■□□□□ 0.24
RNF40-208ENST00000565995 CENPFP49454 3210 aa16.55■□□□□ 0.24
RNF40-208ENST00000565995 MYBBP1AQ9BQG0 1328 aaKnown RBP16.54■□□□□ 0.24
RNF40-208ENST00000565995 HTTP42858 3142 aa16.54■□□□□ 0.24
RNF40-208ENST00000565995 GOLGA2Q08379 1002 aa16.54■□□□□ 0.24
RNF40-208ENST00000565995 MED23Q9ULK4 1368 aa16.53■□□□□ 0.24
RNF40-208ENST00000565995 ANKRD18AQ8IVF6 992 aa16.53■□□□□ 0.24
RNF40-208ENST00000565995 ZNF296Q8WUU4 475 aaPredicted RBP16.53■□□□□ 0.24
RNF40-208ENST00000565995 CWC25Q9NXE8 425 aaPredicted RBP16.53■□□□□ 0.24
RNF40-208ENST00000565995 MKI67P46013 3256 aaKnown RBP16.52■□□□□ 0.24
RNF40-208ENST00000565995 MOB2Q70IA6 237 aa16.52■□□□□ 0.24
RNF40-208ENST00000565995 MYD88Q99836 296 aa16.52■□□□□ 0.24
RNF40-208ENST00000565995 METTL22Q9BUU2 404 aaPredicted RBP16.52■□□□□ 0.24
RNF40-208ENST00000565995 ADAMTS8Q9UP79 889 aa16.52■□□□□ 0.24
RNF40-208ENST00000565995 MYO3BQ8WXR4 1341 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms