RNA–Protein interactions for RNA: ENST00000563328.4

AC004943.2-201, humanhuman

TSL 3 BASIC

Gene AC004943.2, Length 4,842 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004943.2-201ENST00000563328 DDX27Q96GQ7 796 aaKnown RBP17.53■□□□□ 0.4
AC004943.2-201ENST00000563328 CEP104O60308 925 aa17.53■□□□□ 0.4
AC004943.2-201ENST00000563328 MX1P20591 662 aa17.53■□□□□ 0.4
AC004943.2-201ENST00000563328 TMC6Q7Z403 805 aa17.53■□□□□ 0.4
AC004943.2-201ENST00000563328 CPLX1O14810 134 aa17.53■□□□□ 0.4
AC004943.2-201ENST00000563328 BRPF1P55201 1214 aaPredicted RBP17.53■□□□□ 0.4
AC004943.2-201ENST00000563328 VCXQ9H320 206 aa17.53■□□□□ 0.4
AC004943.2-201ENST00000563328 CNNM1Q9NRU3 951 aa17.53■□□□□ 0.4
AC004943.2-201ENST00000563328 FBXO18Q8NFZ0 1043 aa17.52■□□□□ 0.4
AC004943.2-201ENST00000563328 IL16Q14005 1332 aa17.52■□□□□ 0.4
AC004943.2-201ENST00000563328 ABCC1P33527 1531 aa17.52■□□□□ 0.4
AC004943.2-201ENST00000563328 MAP3K19Q56UN5 1328 aa17.52■□□□□ 0.39
AC004943.2-201ENST00000563328 TOP1P11387 765 aaKnown RBP17.52■□□□□ 0.39
AC004943.2-201ENST00000563328 PDCD2Q16342 344 aaPredicted RBP17.52■□□□□ 0.39
AC004943.2-201ENST00000563328 TACO1Q9BSH4 297 aaKnown RBP17.52■□□□□ 0.39
AC004943.2-201ENST00000563328 PPP1R12CQ9BZL4 782 aa17.52■□□□□ 0.39
AC004943.2-201ENST00000563328 SEPT7Q16181 437 aaKnown RBP17.51■□□□□ 0.39
AC004943.2-201ENST00000563328 ARMC9Q7Z3E5 817 aa17.51■□□□□ 0.39
AC004943.2-201ENST00000563328 EYA1Q99502 592 aa17.51■□□□□ 0.39
AC004943.2-201ENST00000563328 PIK3C2GO75747 1445 aa17.51■□□□□ 0.39
AC004943.2-201ENST00000563328 CTAGE15A4D2H0 777 aa17.51■□□□□ 0.39
AC004943.2-201ENST00000563328 HSF2BPO75031 334 aa17.51■□□□□ 0.39
AC004943.2-201ENST00000563328 CTAGE8P0CG41 777 aa17.51■□□□□ 0.39
AC004943.2-201ENST00000563328 PPP2R3AQ06190 1150 aa17.51■□□□□ 0.39
AC004943.2-201ENST00000563328 CTAGE6Q86UF2 777 aa17.51■□□□□ 0.39
AC004943.2-201ENST00000563328 CTAGE4Q8IX94 777 aa17.51■□□□□ 0.39
AC004943.2-201ENST00000563328 NEO1Q92859 1461 aa17.51■□□□□ 0.39
AC004943.2-201ENST00000563328 MYO5CQ9NQX4 1742 aa17.51■□□□□ 0.39
AC004943.2-201ENST00000563328 PI4KAP2A4QPH2 592 aa17.51■□□□□ 0.39
AC004943.2-201ENST00000563328 MXRA7P84157 204 aa17.51■□□□□ 0.39
AC004943.2-201ENST00000563328 CEBPZQ03701 1054 aaKnown RBP17.51■□□□□ 0.39
AC004943.2-201ENST00000563328 PI4KAP1Q8N8J0 262 aa17.51■□□□□ 0.39
AC004943.2-201ENST00000563328 MYD88Q99836 296 aa17.51■□□□□ 0.39
AC004943.2-201ENST00000563328 DBF4Q9UBU7 674 aaPredicted RBP17.5■□□□□ 0.39
AC004943.2-201ENST00000563328 RPSAP08865 295 aaKnown RBP17.5■□□□□ 0.39
AC004943.2-201ENST00000563328 PAF1Q8N7H5 531 aa17.5■□□□□ 0.39
AC004943.2-201ENST00000563328 UGGT1Q9NYU2 1555 aa17.5■□□□□ 0.39
AC004943.2-201ENST00000563328 A6NNZ2 444 aa17.5■□□□□ 0.39
AC004943.2-201ENST00000563328 TUBB8Q3ZCM7 444 aa17.5■□□□□ 0.39
AC004943.2-201ENST00000563328 LARP1BQ659C4 914 aaKnown RBP17.5■□□□□ 0.39
AC004943.2-201ENST00000563328 CWC27Q6UX04 472 aaKnown RBP17.5■□□□□ 0.39
AC004943.2-201ENST00000563328 BAIAP2L1Q9UHR4 511 aa17.5■□□□□ 0.39
AC004943.2-201ENST00000563328 TPX2Q9ULW0 747 aaKnown RBP17.5■□□□□ 0.39
AC004943.2-201ENST00000563328 CCDC57Q2TAC2 916 aa17.5■□□□□ 0.39
AC004943.2-201ENST00000563328 CCDC92Q53HC0 331 aaPredicted RBP17.5■□□□□ 0.39
AC004943.2-201ENST00000563328 DDX19AQ9NUU7 478 aaKnown RBP17.5■□□□□ 0.39
AC004943.2-201ENST00000563328 FBF1Q8TES7 1133 aa17.49■□□□□ 0.39
AC004943.2-201ENST00000563328 ORAI2Q96SN7 254 aa17.49■□□□□ 0.39
AC004943.2-201ENST00000563328 TMOD3Q9NYL9 352 aa17.49■□□□□ 0.39
AC004943.2-201ENST00000563328 ANAPC4Q9UJX5 808 aa17.49■□□□□ 0.39
AC004943.2-201ENST00000563328 SLC39A6Q13433 755 aa17.49■□□□□ 0.39
AC004943.2-201ENST00000563328 TADA2BQ86TJ2 420 aa17.49■□□□□ 0.39
AC004943.2-201ENST00000563328 EXOC4Q96A65 974 aa17.49■□□□□ 0.39
AC004943.2-201ENST00000563328 CCDC69A6NI79 296 aa17.49■□□□□ 0.39
AC004943.2-201ENST00000563328 EIF3CLB5ME19 914 aaKnown RBP17.49■□□□□ 0.39
AC004943.2-201ENST00000563328 ISM2Q6H9L7 571 aa17.49■□□□□ 0.39
AC004943.2-201ENST00000563328 EIF3CQ99613 913 aaKnown RBP17.49■□□□□ 0.39
AC004943.2-201ENST00000563328 TRIM29Q14134 588 aa17.49■□□□□ 0.39
AC004943.2-201ENST00000563328 CCDC83Q8IWF9 413 aa17.49■□□□□ 0.39
AC004943.2-201ENST00000563328 ANKS4BQ8N8V4 417 aa17.49■□□□□ 0.39
AC004943.2-201ENST00000563328 SH3BGRP55822 239 aaPredicted RBP17.48■□□□□ 0.39
AC004943.2-201ENST00000563328 ERCC6LQ2NKX8 1250 aa17.48■□□□□ 0.39
AC004943.2-201ENST00000563328 CPLX2Q6PUV4 134 aaKnown RBP17.48■□□□□ 0.39
AC004943.2-201ENST00000563328 GNL3LQ9NVN8 582 aaKnown RBP17.48■□□□□ 0.39
AC004943.2-201ENST00000563328 LACTBP83111 547 aaPredicted RBP17.48■□□□□ 0.39
AC004943.2-201ENST00000563328 INF2Q27J81 1249 aa17.48■□□□□ 0.39
AC004943.2-201ENST00000563328 RALYLQ86SE5 291 aaKnown RBP17.48■□□□□ 0.39
AC004943.2-201ENST00000563328 C19orf44Q9H6X5 657 aa17.48■□□□□ 0.39
AC004943.2-201ENST00000563328 GCP02774 474 aa17.48■□□□□ 0.39
AC004943.2-201ENST00000563328 RWDD2BP57060 319 aa17.48■□□□□ 0.39
AC004943.2-201ENST00000563328 LARP1Q6PKG0 1096 aaKnown RBP17.48■□□□□ 0.39
AC004943.2-201ENST00000563328 NFXL1Q6ZNB6 911 aa17.48■□□□□ 0.39
AC004943.2-201ENST00000563328 CCAR1Q8IX12 1150 aaKnown RBP17.48■□□□□ 0.39
AC004943.2-201ENST00000563328 JARID2Q92833 1246 aaPredicted RBP17.48■□□□□ 0.39
AC004943.2-201ENST00000563328 ZNF396Q96N95 335 aaPredicted RBP17.47■□□□□ 0.39
AC004943.2-201ENST00000563328 MEIS3Q99687 375 aa17.47■□□□□ 0.39
AC004943.2-201ENST00000563328 ADGBQ8N7X0 1667 aa17.47■□□□□ 0.39
AC004943.2-201ENST00000563328 PTPRTO14522 1441 aa17.47■□□□□ 0.39
AC004943.2-201ENST00000563328 LRRD1A4D1F6 860 aa17.47■□□□□ 0.39
AC004943.2-201ENST00000563328 FKBP4Q02790 459 aaKnown RBP eCLIP17.47■□□□□ 0.39
AC004943.2-201ENST00000563328 MAP7D1Q3KQU3 841 aa17.47■□□□□ 0.39
AC004943.2-201ENST00000563328 IFNL2Q8IZJ0 200 aa17.47■□□□□ 0.39
AC004943.2-201ENST00000563328 RNF216Q9NWF9 866 aaPredicted RBP17.47■□□□□ 0.39
AC004943.2-201ENST00000563328 TRIM66O15016 1216 aa17.47■□□□□ 0.39
AC004943.2-201ENST00000563328 ME1P48163 572 aa17.47■□□□□ 0.39
AC004943.2-201ENST00000563328 SNCBQ16143 134 aa17.47■□□□□ 0.39
AC004943.2-201ENST00000563328 SEC24BO95487 1268 aa17.47■□□□□ 0.39
AC004943.2-201ENST00000563328 TRAF1Q13077 416 aa17.47■□□□□ 0.39
AC004943.2-201ENST00000563328 ZBTB17Q13105 803 aa17.47■□□□□ 0.39
AC004943.2-201ENST00000563328 CCDC38Q502W7 563 aa17.47■□□□□ 0.39
AC004943.2-201ENST00000563328 CHUKO15111 745 aa17.46■□□□□ 0.39
AC004943.2-201ENST00000563328 RAD21O60216 631 aa17.46■□□□□ 0.39
AC004943.2-201ENST00000563328 VAMP4O75379 141 aa17.46■□□□□ 0.39
AC004943.2-201ENST00000563328 TSHZ3Q63HK5 1081 aa17.46■□□□□ 0.39
AC004943.2-201ENST00000563328 BICDL1Q6ZP65 573 aa17.46■□□□□ 0.39
AC004943.2-201ENST00000563328 ATP5J2-PTCD1G3V325 749 aa17.46■□□□□ 0.39
AC004943.2-201ENST00000563328 RABEP2Q9H5N1 569 aa17.46■□□□□ 0.39
AC004943.2-201ENST00000563328 FAM114A2Q9NRY5 505 aa17.46■□□□□ 0.39
AC004943.2-201ENST00000563328 RIPOR2Q9Y4F9 1068 aa17.46■□□□□ 0.39
AC004943.2-201ENST00000563328 DIXDC1Q155Q3 683 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms