RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 CDC5LQ99459 802 aaKnown RBP27.92■■■□□ 2.06
SYNGR3-202ENST00000562045 ANKRD18BA2A2Z9 1011 aa27.92■■■□□ 2.06
SYNGR3-202ENST00000562045 SIRT2Q8IXJ6 389 aa27.91■■■□□ 2.06
SYNGR3-202ENST00000562045 KLHDC4Q8TBB5 520 aa27.91■■■□□ 2.06
SYNGR3-202ENST00000562045 CCDC57Q2TAC2 916 aa27.9■■■□□ 2.06
SYNGR3-202ENST00000562045 SOGA3Q5TF21 947 aa27.9■■■□□ 2.06
SYNGR3-202ENST00000562045 A0A1B0GUL6 1792 aa27.9■■■□□ 2.06
SYNGR3-202ENST00000562045 GPSM2P81274 684 aa27.89■■■□□ 2.06
SYNGR3-202ENST00000562045 HMMRO75330 724 aa27.89■■■□□ 2.05
SYNGR3-202ENST00000562045 TAOK3Q9H2K8 898 aa27.89■■■□□ 2.05
SYNGR3-202ENST00000562045 BSDC1Q9NW68 430 aaPredicted RBP27.89■■■□□ 2.05
SYNGR3-202ENST00000562045 WTIPA6NIX2 430 aaPredicted RBP27.88■■■□□ 2.05
SYNGR3-202ENST00000562045 RFX5P48382 616 aaPredicted RBP27.88■■■□□ 2.05
SYNGR3-202ENST00000562045 TMC4Q7Z404 712 aa27.88■■■□□ 2.05
SYNGR3-202ENST00000562045 RTKN2Q8IZC4 609 aa27.88■■■□□ 2.05
SYNGR3-202ENST00000562045 IGHMBP2P38935 993 aaKnown RBP27.87■■■□□ 2.05
SYNGR3-202ENST00000562045 FKBP4Q02790 459 aaKnown RBP eCLIP27.87■■■□□ 2.05
SYNGR3-202ENST00000562045 CC2D2BQ6DHV5 1058 aa27.87■■■□□ 2.05
SYNGR3-202ENST00000562045 PUS3Q9BZE2 481 aaKnown RBP27.87■■■□□ 2.05
SYNGR3-202ENST00000562045 ZNF277Q9NRM2 450 aaPredicted RBP27.87■■■□□ 2.05
SYNGR3-202ENST00000562045 MINPP1Q9UNW1 487 aa27.87■■■□□ 2.05
SYNGR3-202ENST00000562045 LTBP3Q9NS15 1303 aa27.87■■■□□ 2.05
SYNGR3-202ENST00000562045 COL4A5P29400 1685 aa27.86■■■□□ 2.05
SYNGR3-202ENST00000562045 SMC5Q8IY18 1101 aa27.86■■■□□ 2.05
SYNGR3-202ENST00000562045 MPNDQ8N594 471 aa27.86■■■□□ 2.05
SYNGR3-202ENST00000562045 NSFL1CQ9UNZ2 370 aaKnown RBP27.86■■■□□ 2.05
SYNGR3-202ENST00000562045 DICER1Q9UPY3 1922 aaKnown RBP27.86■■■□□ 2.05
SYNGR3-202ENST00000562045 ATP8B2P98198 1209 aa27.85■■■□□ 2.05
SYNGR3-202ENST00000562045 DPP8Q6V1X1 898 aaPredicted RBP27.85■■■□□ 2.05
SYNGR3-202ENST00000562045 GCC1Q96CN9 775 aa27.85■■■□□ 2.05
SYNGR3-202ENST00000562045 PSMD1Q99460 953 aa27.85■■■□□ 2.05
SYNGR3-202ENST00000562045 MPHOSPH8Q99549 860 aa27.85■■■□□ 2.05
SYNGR3-202ENST00000562045 C9orf131Q5VYM1 1079 aa27.84■■■□□ 2.05
SYNGR3-202ENST00000562045 GPR101Q96P66 508 aaPredicted RBP27.84■■■□□ 2.05
SYNGR3-202ENST00000562045 POLLQ9UGP5 575 aa27.84■■■□□ 2.05
SYNGR3-202ENST00000562045 PNMA6EA0A0J9YXQ4 647 aa27.84■■■□□ 2.05
SYNGR3-202ENST00000562045 TAF7LQ5H9L4 462 aa27.84■■■□□ 2.05
SYNGR3-202ENST00000562045 TIAM2Q8IVF5 1701 aa27.83■■■□□ 2.05
SYNGR3-202ENST00000562045 PTPN12Q05209 780 aaKnown RBP27.83■■■□□ 2.05
SYNGR3-202ENST00000562045 LRRC24Q50LG9 513 aa27.83■■■□□ 2.05
SYNGR3-202ENST00000562045 LDHAL6AQ6ZMR3 332 aa27.83■■■□□ 2.05
SYNGR3-202ENST00000562045 TMX4Q9H1E5 349 aaPredicted RBP27.83■■■□□ 2.05
SYNGR3-202ENST00000562045 RNF181Q9P0P0 153 aa27.83■■■□□ 2.05
SYNGR3-202ENST00000562045 MTX1Q13505 466 aa27.82■■■□□ 2.04
SYNGR3-202ENST00000562045 RTFDC1Q9BY42 306 aaPredicted RBP27.82■■■□□ 2.04
SYNGR3-202ENST00000562045 LMNB1P20700 586 aa27.81■■■□□ 2.04
SYNGR3-202ENST00000562045 HELBQ8NG08 1087 aaPredicted RBP27.81■■■□□ 2.04
SYNGR3-202ENST00000562045 PA2G4Q9UQ80 394 aaKnown RBP27.81■■■□□ 2.04
SYNGR3-202ENST00000562045 SRGAP3O43295 1099 aa27.81■■■□□ 2.04
SYNGR3-202ENST00000562045 CHRNDQ07001 517 aa27.81■■■□□ 2.04
SYNGR3-202ENST00000562045 TBC1D16Q8TBP0 767 aa27.81■■■□□ 2.04
SYNGR3-202ENST00000562045 DCTPP1Q9H773 170 aa27.81■■■□□ 2.04
SYNGR3-202ENST00000562045 PODXL2Q9NZ53 605 aa27.81■■■□□ 2.04
SYNGR3-202ENST00000562045 ANKIB1Q9P2G1 1089 aa27.81■■■□□ 2.04
SYNGR3-202ENST00000562045 SNAP23O00161 211 aa27.8■■■□□ 2.04
SYNGR3-202ENST00000562045 GRIPAP1Q4V328 841 aa27.8■■■□□ 2.04
SYNGR3-202ENST00000562045 SSH3Q8TE77 659 aa27.79■■■□□ 2.04
SYNGR3-202ENST00000562045 CNNM1Q9NRU3 951 aa27.79■■■□□ 2.04
SYNGR3-202ENST00000562045 RIPOR2Q9Y4F9 1068 aa27.79■■■□□ 2.04
SYNGR3-202ENST00000562045 TAF5LO75529 589 aa27.78■■■□□ 2.04
SYNGR3-202ENST00000562045 IARSP41252 1262 aaKnown RBP27.78■■■□□ 2.04
SYNGR3-202ENST00000562045 AOC3Q16853 763 aa27.78■■■□□ 2.04
SYNGR3-202ENST00000562045 XDHP47989 1333 aa27.78■■■□□ 2.04
SYNGR3-202ENST00000562045 SIL1Q9H173 461 aa27.78■■■□□ 2.04
SYNGR3-202ENST00000562045 C6orf229H3BNL8 230 aa27.77■■■□□ 2.04
SYNGR3-202ENST00000562045 UFL1O94874 794 aa27.77■■■□□ 2.04
SYNGR3-202ENST00000562045 POLA2Q14181 598 aa27.76■■■□□ 2.03
SYNGR3-202ENST00000562045 ATG9AQ7Z3C6 839 aa27.75■■■□□ 2.03
SYNGR3-202ENST00000562045 GGA1Q9UJY5 639 aa27.75■■■□□ 2.03
SYNGR3-202ENST00000562045 RIMBP2O15034 1052 aa27.75■■■□□ 2.03
SYNGR3-202ENST00000562045 KLRK1P26718 216 aa27.75■■■□□ 2.03
SYNGR3-202ENST00000562045 COPRSQ9NQ92 184 aa27.75■■■□□ 2.03
SYNGR3-202ENST00000562045 PPIP5K2O43314 1243 aa27.74■■■□□ 2.03
SYNGR3-202ENST00000562045 EYA2O00167 538 aa27.73■■■□□ 2.03
SYNGR3-202ENST00000562045 NUCB1Q02818 461 aa27.73■■■□□ 2.03
SYNGR3-202ENST00000562045 SUPT20HQ8NEM7 779 aa27.73■■■□□ 2.03
SYNGR3-202ENST00000562045 ATP2B4P23634 1241 aa27.72■■■□□ 2.03
SYNGR3-202ENST00000562045 KIAA2012Q0VF49 1180 aa27.72■■■□□ 2.03
SYNGR3-202ENST00000562045 WASHC4Q2M389 1173 aa27.72■■■□□ 2.03
SYNGR3-202ENST00000562045 TXNRD3Q86VQ6 643 aa27.72■■■□□ 2.03
SYNGR3-202ENST00000562045 LARGE2Q8N3Y3 721 aa27.72■■■□□ 2.03
SYNGR3-202ENST00000562045 ANKRD2Q9GZV1 360 aa27.72■■■□□ 2.03
SYNGR3-202ENST00000562045 VGLL2Q8N8G2 317 aa27.72■■■□□ 2.03
SYNGR3-202ENST00000562045 YY1P25490 414 aa27.71■■■□□ 2.03
SYNGR3-202ENST00000562045 ZNF804BA4D1E1 1349 aa27.7■■■□□ 2.03
SYNGR3-202ENST00000562045 ANKRD45Q5TZF3 282 aa27.7■■■□□ 2.03
SYNGR3-202ENST00000562045 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.7■■■□□ 2.03
SYNGR3-202ENST00000562045 MROH5Q6ZUA9 1318 aa27.7■■■□□ 2.02
SYNGR3-202ENST00000562045 IRS2Q9Y4H2 1338 aa27.7■■■□□ 2.02
SYNGR3-202ENST00000562045 METTL24Q5JXM2 366 aa27.7■■■□□ 2.02
SYNGR3-202ENST00000562045 CHD1LQ86WJ1 897 aa27.7■■■□□ 2.02
SYNGR3-202ENST00000562045 DOK7Q18PE1 504 aa27.69■■■□□ 2.02
SYNGR3-202ENST00000562045 ZBTB47Q9UFB7 747 aaPredicted RBP27.69■■■□□ 2.02
SYNGR3-202ENST00000562045 EXOC6BQ9Y2D4 811 aa27.69■■■□□ 2.02
SYNGR3-202ENST00000562045 LEMD3Q9Y2U8 911 aa27.69■■■□□ 2.02
SYNGR3-202ENST00000562045 CIAO1O76071 339 aa27.68■■■□□ 2.02
SYNGR3-202ENST00000562045 DBNDD1Q9H9R9 158 aa27.68■■■□□ 2.02
SYNGR3-202ENST00000562045 SCN9AQ15858 1988 aa27.68■■■□□ 2.02
SYNGR3-202ENST00000562045 ZNF541Q9H0D2 1346 aa27.67■■■□□ 2.02
SYNGR3-202ENST00000562045 HSP90AB4PQ58FF6 505 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms