RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	CHMP3	Q9Y3E7	222 aa		10.56	□□□□□ -0.72
MARK3-223	ENST00000561071	HCN4	Q9Y3Q4	1203 aa		10.56	□□□□□ -0.72
MARK3-223	ENST00000561071	CHD2	O14647	1828 aa	Known RBP	10.56	□□□□□ -0.72
MARK3-223	ENST00000561071	WDR44	Q5JSH3	913 aa		10.55	□□□□□ -0.72
MARK3-223	ENST00000561071	POTEA	Q6S8J7	498 aa		10.55	□□□□□ -0.72
MARK3-223	ENST00000561071	STAG2	Q8N3U4	1231 aa		10.55	□□□□□ -0.72
MARK3-223	ENST00000561071	RGS17	Q9UGC6	210 aa	Predicted RBP	10.55	□□□□□ -0.72
MARK3-223	ENST00000561071	ROBO1	Q9Y6N7	1651 aa		10.54	□□□□□ -0.72
MARK3-223	ENST00000561071	PTPRU	Q92729	1446 aa		10.54	□□□□□ -0.72
MARK3-223	ENST00000561071	SLC35F4	A4IF30	521 aa		10.53	□□□□□ -0.72
MARK3-223	ENST00000561071	C1orf216	Q8TAB5	229 aa		10.53	□□□□□ -0.72
MARK3-223	ENST00000561071	VTI1A	Q96AJ9	217 aa		10.53	□□□□□ -0.72
MARK3-223	ENST00000561071	NGLY1	Q96IV0	654 aa		10.53	□□□□□ -0.72
MARK3-223	ENST00000561071	BRD1	O95696	1058 aa		10.52	□□□□□ -0.73
MARK3-223	ENST00000561071	HIRA	P54198	1017 aa	Predicted RBP	10.52	□□□□□ -0.73
MARK3-223	ENST00000561071	GAS2L1	Q99501	681 aa	Predicted RBP	10.52	□□□□□ -0.73
MARK3-223	ENST00000561071	PHACTR1	Q9C0D0	580 aa		10.52	□□□□□ -0.73
MARK3-223	ENST00000561071	C19orf44	Q9H6X5	657 aa		10.52	□□□□□ -0.73
MARK3-223	ENST00000561071	GPAM	Q9HCL2	828 aa		10.52	□□□□□ -0.73
MARK3-223	ENST00000561071	SEPT3	Q9UH03	358 aa		10.52	□□□□□ -0.73
MARK3-223	ENST00000561071	DYRK1B	Q9Y463	629 aa		10.52	□□□□□ -0.73
MARK3-223	ENST00000561071	SPHKAP	Q2M3C7	1700 aa		10.52	□□□□□ -0.73
MARK3-223	ENST00000561071	MET	P08581	1390 aa		10.52	□□□□□ -0.73
MARK3-223	ENST00000561071	CLTCL1	P53675	1640 aa		10.51	□□□□□ -0.73
MARK3-223	ENST00000561071		A0A1B0GTH6	734 aa		10.51	□□□□□ -0.73
MARK3-223	ENST00000561071	ATF3	P18847	181 aa		10.51	□□□□□ -0.73
MARK3-223	ENST00000561071	ATP4A	P20648	1035 aa		10.51	□□□□□ -0.73
MARK3-223	ENST00000561071	MSX1	P28360	303 aa		10.51	□□□□□ -0.73
MARK3-223	ENST00000561071	NAA30	Q147X3	362 aa	Predicted RBP	10.51	□□□□□ -0.73
MARK3-223	ENST00000561071	NBPF1	Q3BBV0	1214 aa		10.51	□□□□□ -0.73
MARK3-223	ENST00000561071	ZNF787	Q6DD87	383 aa		10.51	□□□□□ -0.73
MARK3-223	ENST00000561071	B4GALNT3	Q6L9W6	998 aa		10.51	□□□□□ -0.73
MARK3-223	ENST00000561071	ALDH16A1	Q8IZ83	802 aa		10.51	□□□□□ -0.73
MARK3-223	ENST00000561071	KLRG1	Q96E93	195 aa		10.51	□□□□□ -0.73
MARK3-223	ENST00000561071	CCDC155	Q8N6L0	562 aa		10.5	□□□□□ -0.73
MARK3-223	ENST00000561071	QTRT2	Q9H974	415 aa	Known RBP	10.5	□□□□□ -0.73
MARK3-223	ENST00000561071	ZDHHC3	Q9NYG2	299 aa		10.5	□□□□□ -0.73
MARK3-223	ENST00000561071	PIK3R4	Q99570	1358 aa		10.5	□□□□□ -0.73
MARK3-223	ENST00000561071	HFM1	A2PYH4	1435 aa		10.5	□□□□□ -0.73
MARK3-223	ENST00000561071	TRPM2	O94759	1503 aa		10.49	□□□□□ -0.73
MARK3-223	ENST00000561071	DIP2A	Q14689	1571 aa		10.49	□□□□□ -0.73
MARK3-223	ENST00000561071	NRXN3	Q9Y4C0	1643 aa		10.49	□□□□□ -0.73
MARK3-223	ENST00000561071	AEBP1	Q8IUX7	1158 aa		10.49	□□□□□ -0.73
MARK3-223	ENST00000561071	SAP130	Q9H0E3	1048 aa		10.49	□□□□□ -0.73
MARK3-223	ENST00000561071	RUBCNL	Q9H714	662 aa		10.49	□□□□□ -0.73
MARK3-223	ENST00000561071	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	10.48	□□□□□ -0.73
MARK3-223	ENST00000561071	F11	P03951	625 aa		10.48	□□□□□ -0.73
MARK3-223	ENST00000561071	C7orf43	Q8WVR3	580 aa		10.48	□□□□□ -0.73
MARK3-223	ENST00000561071	NCOA3	Q9Y6Q9	1424 aa		10.48	□□□□□ -0.73
MARK3-223	ENST00000561071	NEXMIF	Q5QGS0	1516 aa		10.48	□□□□□ -0.73
MARK3-223	ENST00000561071	SETBP1	Q9Y6X0	1596 aa		10.48	□□□□□ -0.73
MARK3-223	ENST00000561071	PHLPP1	O60346	1717 aa		10.47	□□□□□ -0.73
MARK3-223	ENST00000561071	PTCD1	O75127	700 aa	Known RBP	10.47	□□□□□ -0.73
MARK3-223	ENST00000561071	TAT	P17735	454 aa	Predicted RBP	10.47	□□□□□ -0.73
MARK3-223	ENST00000561071	RIPOR1	Q6ZS17	1223 aa		10.47	□□□□□ -0.73
MARK3-223	ENST00000561071	BRINP3	Q76B58	766 aa		10.47	□□□□□ -0.73
MARK3-223	ENST00000561071	COL26A1	Q96A83	441 aa		10.47	□□□□□ -0.73
MARK3-223	ENST00000561071	CUEDC1	Q9NWM3	386 aa	Predicted RBP	10.47	□□□□□ -0.73
MARK3-223	ENST00000561071	LRFN2	Q9ULH4	789 aa		10.47	□□□□□ -0.73
MARK3-223	ENST00000561071	ARSJ	Q5FYB0	599 aa	Predicted RBP	10.46	□□□□□ -0.73
MARK3-223	ENST00000561071	COX20	Q5RI15	118 aa		10.46	□□□□□ -0.73
MARK3-223	ENST00000561071	C1orf53	Q5VUE5	145 aa		10.46	□□□□□ -0.73
MARK3-223	ENST00000561071	BICDL1	Q6ZP65	573 aa		10.46	□□□□□ -0.73
MARK3-223	ENST00000561071	RHPN1	Q8TCX5	695 aa		10.46	□□□□□ -0.73
MARK3-223	ENST00000561071	DDX17	Q92841	729 aa	Known RBP	10.46	□□□□□ -0.73
MARK3-223	ENST00000561071	JCAD	Q9P266	1359 aa		10.46	□□□□□ -0.74
MARK3-223	ENST00000561071	PPFIA3	O75145	1194 aa		10.45	□□□□□ -0.74
MARK3-223	ENST00000561071	ARID4A	P29374	1257 aa	Predicted RBP	10.45	□□□□□ -0.74
MARK3-223	ENST00000561071	SERPINB4	P48594	390 aa		10.45	□□□□□ -0.74
MARK3-223	ENST00000561071	VEGFB	P49765	207 aa		10.45	□□□□□ -0.74
MARK3-223	ENST00000561071	RTN1	Q16799	776 aa		10.45	□□□□□ -0.74
MARK3-223	ENST00000561071	RGL3	Q3MIN7	710 aa		10.45	□□□□□ -0.74
MARK3-223	ENST00000561071	ZIC5	Q96T25	663 aa		10.45	□□□□□ -0.74
MARK3-223	ENST00000561071	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	10.45	□□□□□ -0.74	2e-6	■■■■■ 93.7
MARK3-223	ENST00000561071	XRN1	Q8IZH2	1706 aa	Known RBP	10.44	□□□□□ -0.74
MARK3-223	ENST00000561071	THBS1	P07996	1170 aa		10.44	□□□□□ -0.74
MARK3-223	ENST00000561071	ITGA6	P23229	1130 aa		10.44	□□□□□ -0.74
MARK3-223	ENST00000561071	C16orf46	Q6P387	395 aa		10.44	□□□□□ -0.74
MARK3-223	ENST00000561071	GTF3C2	Q8WUA4	911 aa	Predicted RBP	10.44	□□□□□ -0.74
MARK3-223	ENST00000561071	MYO19	Q96H55	970 aa		10.44	□□□□□ -0.74
MARK3-223	ENST00000561071	MPHOSPH9	Q99550	1183 aa		10.44	□□□□□ -0.74
MARK3-223	ENST00000561071	KLK14	Q9P0G3	267 aa		10.44	□□□□□ -0.74
MARK3-223	ENST00000561071	KIF1B	O60333	1816 aa		10.44	□□□□□ -0.74
MARK3-223	ENST00000561071	COL16A1	Q07092	1604 aa	Predicted RBP	10.44	□□□□□ -0.74
MARK3-223	ENST00000561071		A0A1W2PNR3	127 aa		10.43	□□□□□ -0.74
MARK3-223	ENST00000561071	DGKZ	Q13574	1117 aa		10.43	□□□□□ -0.74
MARK3-223	ENST00000561071	MTMR3	Q13615	1198 aa		10.43	□□□□□ -0.74
MARK3-223	ENST00000561071	HSH2D	Q96JZ2	352 aa		10.43	□□□□□ -0.74
MARK3-223	ENST00000561071	CRISPLD1	Q9H336	500 aa		10.43	□□□□□ -0.74
MARK3-223	ENST00000561071	ANO2	Q9NQ90	1003 aa		10.43	□□□□□ -0.74
MARK3-223	ENST00000561071	MST1R	Q04912	1400 aa		10.42	□□□□□ -0.74
MARK3-223	ENST00000561071	ROBO2	Q9HCK4	1378 aa		10.42	□□□□□ -0.74
MARK3-223	ENST00000561071	RPGRIP1L	Q68CZ1	1315 aa		10.42	□□□□□ -0.74
MARK3-223	ENST00000561071	ADGRF5	Q8IZF2	1346 aa		10.42	□□□□□ -0.74
MARK3-223	ENST00000561071	ABL1	P00519	1130 aa		10.42	□□□□□ -0.74
MARK3-223	ENST00000561071	KCNA1	Q09470	495 aa		10.42	□□□□□ -0.74
MARK3-223	ENST00000561071	DBN1	Q16643	649 aa		10.42	□□□□□ -0.74
MARK3-223	ENST00000561071	MEX3C	Q5U5Q3	659 aa	Known RBP	10.42	□□□□□ -0.74
MARK3-223	ENST00000561071	PGBD3	Q8N328	593 aa		10.42	□□□□□ -0.74
MARK3-223	ENST00000561071	ZNF280C	Q8ND82	737 aa		10.42	□□□□□ -0.74

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