RNA–Protein interactions for RNA: ENST00000560881.5

RPL28-211, Transcript of ribosomal protein L28, humanhuman

TSL 5

Gene RPL28, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-211ENST00000560881 PSMD1Q99460 953 aa20.89■□□□□ 0.93
RPL28-211ENST00000560881 MPHOSPH8Q99549 860 aa20.89■□□□□ 0.93
RPL28-211ENST00000560881 BSDC1Q9NW68 430 aaPredicted RBP20.89■□□□□ 0.93
RPL28-211ENST00000560881 WTIPA6NIX2 430 aaPredicted RBP20.88■□□□□ 0.93
RPL28-211ENST00000560881 ZBTB7BO15156 539 aaPredicted RBP20.88■□□□□ 0.93
RPL28-211ENST00000560881 RRP1P56182 461 aaKnown RBP20.88■□□□□ 0.93
RPL28-211ENST00000560881 MVPQ14764 893 aaKnown RBP20.88■□□□□ 0.93
RPL28-211ENST00000560881 MINPP1Q9UNW1 487 aa20.88■□□□□ 0.93
RPL28-211ENST00000560881 GNAI2P04899 355 aa20.86■□□□□ 0.93
RPL28-211ENST00000560881 MS4A1P11836 297 aa20.86■□□□□ 0.93
RPL28-211ENST00000560881 IARSP41252 1262 aaKnown RBP20.86■□□□□ 0.93
RPL28-211ENST00000560881 PUS3Q9BZE2 481 aaKnown RBP20.86■□□□□ 0.93
RPL28-211ENST00000560881 ANKIB1Q9P2G1 1089 aa20.86■□□□□ 0.93
RPL28-211ENST00000560881 POLLQ9UGP5 575 aa20.86■□□□□ 0.93
RPL28-211ENST00000560881 AOC3Q16853 763 aa20.86■□□□□ 0.93
RPL28-211ENST00000560881 RFX5P48382 616 aaPredicted RBP20.85■□□□□ 0.93
RPL28-211ENST00000560881 GRIPAP1Q4V328 841 aa20.85■□□□□ 0.93
RPL28-211ENST00000560881 LDHAL6AQ6ZMR3 332 aa20.85■□□□□ 0.93
RPL28-211ENST00000560881 RTFDC1Q9BY42 306 aaPredicted RBP20.85■□□□□ 0.93
RPL28-211ENST00000560881 C6orf229H3BNL8 230 aa20.84■□□□□ 0.93
RPL28-211ENST00000560881 UFL1O94874 794 aa20.84■□□□□ 0.93
RPL28-211ENST00000560881 CHRNDQ07001 517 aa20.84■□□□□ 0.93
RPL28-211ENST00000560881 PDE3AQ14432 1141 aa20.84■□□□□ 0.93
RPL28-211ENST00000560881 HELBQ8NG08 1087 aaPredicted RBP20.84■□□□□ 0.93
RPL28-211ENST00000560881 TBC1D16Q8TBP0 767 aa20.84■□□□□ 0.93
RPL28-211ENST00000560881 SNAP23O00161 211 aa20.83■□□□□ 0.93
RPL28-211ENST00000560881 PPIP5K2O43314 1243 aa20.83■□□□□ 0.93
RPL28-211ENST00000560881 LRRC24Q50LG9 513 aa20.83■□□□□ 0.93
RPL28-211ENST00000560881 CNNM1Q9NRU3 951 aa20.83■□□□□ 0.93
RPL28-211ENST00000560881 PODXL2Q9NZ53 605 aa20.83■□□□□ 0.93
RPL28-211ENST00000560881 XDHP47989 1333 aa20.83■□□□□ 0.93
RPL28-211ENST00000560881 PNMA6EA0A0J9YXQ4 647 aa20.83■□□□□ 0.92
RPL28-211ENST00000560881 PTPN12Q05209 780 aaKnown RBP20.83■□□□□ 0.92
RPL28-211ENST00000560881 PA2G4Q9UQ80 394 aaKnown RBP20.83■□□□□ 0.92
RPL28-211ENST00000560881 HDAC5Q9UQL6 1122 aa20.83■□□□□ 0.92
RPL28-211ENST00000560881 SRGAP3O43295 1099 aa20.82■□□□□ 0.92
RPL28-211ENST00000560881 TAF5LO75529 589 aa20.82■□□□□ 0.92
RPL28-211ENST00000560881 LARGE2Q8N3Y3 721 aa20.82■□□□□ 0.92
RPL28-211ENST00000560881 ZNF526Q8TF50 670 aaPredicted RBP20.82■□□□□ 0.92
RPL28-211ENST00000560881 GGA1Q9UJY5 639 aa20.82■□□□□ 0.92
RPL28-211ENST00000560881 DDX19BQ9UMR2 479 aa20.82■□□□□ 0.92
RPL28-211ENST00000560881 RIMBP2O15034 1052 aa20.81■□□□□ 0.92
RPL28-211ENST00000560881 SUPT20HQ8NEM7 779 aa20.81■□□□□ 0.92
RPL28-211ENST00000560881 SIL1Q9H173 461 aa20.81■□□□□ 0.92
RPL28-211ENST00000560881 MTX1Q13505 466 aa20.8■□□□□ 0.92
RPL28-211ENST00000560881 KLRK1P26718 216 aa20.8■□□□□ 0.92
RPL28-211ENST00000560881 KIAA2012Q0VF49 1180 aa20.8■□□□□ 0.92
RPL28-211ENST00000560881 WASHC4Q2M389 1173 aa20.8■□□□□ 0.92
RPL28-211ENST00000560881 RIPOR2Q9Y4F9 1068 aa20.8■□□□□ 0.92
RPL28-211ENST00000560881 ATP2B4P23634 1241 aa20.79■□□□□ 0.92
RPL28-211ENST00000560881 SUPT16HQ9Y5B9 1047 aaKnown RBP20.79■□□□□ 0.92
RPL28-211ENST00000560881 ZNF541Q9H0D2 1346 aa20.79■□□□□ 0.92
RPL28-211ENST00000560881 ZBTB40Q9NUA8 1239 aa20.78■□□□□ 0.92
RPL28-211ENST00000560881 DOK7Q18PE1 504 aa20.77■□□□□ 0.92
RPL28-211ENST00000560881 TXNRD3Q86VQ6 643 aa20.77■□□□□ 0.92
RPL28-211ENST00000560881 ANKRD2Q9GZV1 360 aa20.77■□□□□ 0.92
RPL28-211ENST00000560881 DBNDD1Q9H9R9 158 aa20.77■□□□□ 0.92
RPL28-211ENST00000560881 SCN9AQ15858 1988 aa20.77■□□□□ 0.92
RPL28-211ENST00000560881 ZNF804BA4D1E1 1349 aa20.77■□□□□ 0.91
RPL28-211ENST00000560881 EYA2O00167 538 aa20.77■□□□□ 0.91
RPL28-211ENST00000560881 METTL24Q5JXM2 366 aa20.77■□□□□ 0.91
RPL28-211ENST00000560881 CEP85Q6P2H3 762 aa20.77■□□□□ 0.91
RPL28-211ENST00000560881 ATG9AQ7Z3C6 839 aa20.77■□□□□ 0.91
RPL28-211ENST00000560881 NIM1KQ8IY84 436 aa20.77■□□□□ 0.91
RPL28-211ENST00000560881 ZNF784Q8NCA9 323 aaPredicted RBP20.77■□□□□ 0.91
RPL28-211ENST00000560881 JDP2Q8WYK2 163 aa20.77■□□□□ 0.91
RPL28-211ENST00000560881 KCNJ4P48050 445 aa20.76■□□□□ 0.91
RPL28-211ENST00000560881 CRBNQ96SW2 442 aa20.76■□□□□ 0.91
RPL28-211ENST00000560881 EYA3Q99504 573 aa20.76■□□□□ 0.91
RPL28-211ENST00000560881 ZC3H4Q9UPT8 1303 aaKnown RBP20.75■□□□□ 0.91
RPL28-211ENST00000560881 YDJCA8MPS7 323 aa20.75■□□□□ 0.91
RPL28-211ENST00000560881 FZD9O00144 591 aa20.75■□□□□ 0.91
RPL28-211ENST00000560881 ATP8B2P98198 1209 aa20.75■□□□□ 0.91
RPL28-211ENST00000560881 VGLL2Q8N8G2 317 aa20.75■□□□□ 0.91
RPL28-211ENST00000560881 ZC3H12CQ9C0D7 883 aaKnown RBP20.75■□□□□ 0.91
RPL28-211ENST00000560881 COPRSQ9NQ92 184 aa20.75■□□□□ 0.91
RPL28-211ENST00000560881 LEMD3Q9Y2U8 911 aa20.75■□□□□ 0.91
RPL28-211ENST00000560881 MED23Q9ULK4 1368 aa20.74■□□□□ 0.91
RPL28-211ENST00000560881 MROH5Q6ZUA9 1318 aa20.74■□□□□ 0.91
RPL28-211ENST00000560881 VPS33BQ9H267 617 aa20.74■□□□□ 0.91
RPL28-211ENST00000560881 DDNO94850 711 aaPredicted RBP20.73■□□□□ 0.91
RPL28-211ENST00000560881 POLA2Q14181 598 aa20.73■□□□□ 0.91
RPL28-211ENST00000560881 IRS2Q9Y4H2 1338 aa20.73■□□□□ 0.91
RPL28-211ENST00000560881 ECE2O60344 883 aa20.73■□□□□ 0.91
RPL28-211ENST00000560881 SSH3Q8TE77 659 aa20.73■□□□□ 0.91
RPL28-211ENST00000560881 KCNQ5Q9NR82 932 aa20.73■□□□□ 0.91
RPL28-211ENST00000560881 GLTPD2A6NH11 291 aa20.72■□□□□ 0.91
RPL28-211ENST00000560881 CIAO1O76071 339 aa20.72■□□□□ 0.91
RPL28-211ENST00000560881 ZNRF3Q9ULT6 936 aa20.72■□□□□ 0.91
RPL28-211ENST00000560881 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.72■□□□□ 0.91
RPL28-211ENST00000560881 RAD17O75943 681 aa20.71■□□□□ 0.91
RPL28-211ENST00000560881 PDE8BO95263 885 aa20.71■□□□□ 0.91
RPL28-211ENST00000560881 SIRT2Q8IXJ6 389 aa20.71■□□□□ 0.91
RPL28-211ENST00000560881 PSME4Q14997 1843 aa20.71■□□□□ 0.91
RPL28-211ENST00000560881 EIF6P56537 245 aaKnown RBP20.7■□□□□ 0.91
RPL28-211ENST00000560881 NMRK2Q9NPI5 230 aa20.7■□□□□ 0.91
RPL28-211ENST00000560881 ZNF646O15015 1829 aaPredicted RBP20.7■□□□□ 0.9
RPL28-211ENST00000560881 G3V3G9 751 aa20.7■□□□□ 0.9
RPL28-211ENST00000560881 IL15P40933 162 aaPredicted RBP20.7■□□□□ 0.9
RPL28-211ENST00000560881 CXCL9Q07325 125 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms