RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 H7C1D1 291 aa14.94□□□□□ -0.02
LDLR-212ENST00000560467 PSMD14O00487 310 aa14.94□□□□□ -0.02
LDLR-212ENST00000560467 EGFRP00533 1210 aa14.94□□□□□ -0.02
LDLR-212ENST00000560467 HOXB7P09629 217 aa14.94□□□□□ -0.02
LDLR-212ENST00000560467 BRPF1P55201 1214 aaPredicted RBP14.94□□□□□ -0.02
LDLR-212ENST00000560467 CCDC30Q5VVM6 783 aa14.94□□□□□ -0.02
LDLR-212ENST00000560467 CDC37L1Q7L3B6 337 aa14.94□□□□□ -0.02
LDLR-212ENST00000560467 SAMD7Q7Z3H4 446 aa14.94□□□□□ -0.02
LDLR-212ENST00000560467 CELF1Q92879 486 aaKnown RBP14.94□□□□□ -0.02
LDLR-212ENST00000560467 HHIPL1Q96JK4 782 aa14.94□□□□□ -0.02
LDLR-212ENST00000560467 DBNDD1Q9H9R9 158 aa14.94□□□□□ -0.02
LDLR-212ENST00000560467 ATP5J2-PTCD1G3V325 749 aa14.93□□□□□ -0.02
LDLR-212ENST00000560467 CA12O43570 354 aa14.93□□□□□ -0.02
LDLR-212ENST00000560467 VAMP4O75379 141 aa14.93□□□□□ -0.02
LDLR-212ENST00000560467 RARSP54136 660 aaKnown RBP14.93□□□□□ -0.02
LDLR-212ENST00000560467 TBC1D10BQ4KMP7 808 aaPredicted RBP14.93□□□□□ -0.02
LDLR-212ENST00000560467 TMC4Q7Z404 712 aa14.93□□□□□ -0.02
LDLR-212ENST00000560467 C8orf58Q8NAV2 365 aa14.93□□□□□ -0.02
LDLR-212ENST00000560467 FAM89AQ96GI7 184 aa14.93□□□□□ -0.02
LDLR-212ENST00000560467 MCOLN1Q9GZU1 580 aa14.93□□□□□ -0.02
LDLR-212ENST00000560467 RIMBP2O15034 1052 aa14.92□□□□□ -0.02
LDLR-212ENST00000560467 HUNKP57058 714 aa14.92□□□□□ -0.02
LDLR-212ENST00000560467 GPSM2P81274 684 aa14.92□□□□□ -0.02
LDLR-212ENST00000560467 WASHC4Q2M389 1173 aa14.92□□□□□ -0.02
LDLR-212ENST00000560467 RTL5Q5HYW3 569 aaPredicted RBP14.92□□□□□ -0.02
LDLR-212ENST00000560467 HDGFL1Q5TGJ6 251 aa14.92□□□□□ -0.02
LDLR-212ENST00000560467 PLBD2Q8NHP8 589 aa14.92□□□□□ -0.02
LDLR-212ENST00000560467 FRAT1Q92837 279 aaPredicted RBP14.92□□□□□ -0.02
LDLR-212ENST00000560467 ISCA1Q9BUE6 129 aa14.92□□□□□ -0.02
LDLR-212ENST00000560467 KCNQ5Q9NR82 932 aa14.92□□□□□ -0.02
LDLR-212ENST00000560467 POLLQ9UGP5 575 aa14.92□□□□□ -0.02
LDLR-212ENST00000560467 NSFL1CQ9UNZ2 370 aaKnown RBP14.92□□□□□ -0.02
LDLR-212ENST00000560467 COL4A1P02462 1669 aa14.92□□□□□ -0.02
LDLR-212ENST00000560467 TRPM7Q96QT4 1865 aa14.92□□□□□ -0.02
LDLR-212ENST00000560467 KIF16BQ96L93 1317 aa14.92□□□□□ -0.02
LDLR-212ENST00000560467 LAMB2P55268 1798 aa14.91□□□□□ -0.02
LDLR-212ENST00000560467 RTL9Q8NET4 1388 aa14.91□□□□□ -0.02
LDLR-212ENST00000560467 ADM5C9JUS6 153 aa14.91□□□□□ -0.02
LDLR-212ENST00000560467 C6orf229H3BNL8 230 aa14.91□□□□□ -0.02
LDLR-212ENST00000560467 RRP1P56182 461 aaKnown RBP14.91□□□□□ -0.02
LDLR-212ENST00000560467 MLLT1Q03111 559 aaPredicted RBP14.91□□□□□ -0.02
LDLR-212ENST00000560467 DOK7Q18PE1 504 aa14.91□□□□□ -0.02
LDLR-212ENST00000560467 KRT26Q7Z3Y9 468 aa14.91□□□□□ -0.02
LDLR-212ENST00000560467 ECE2O60344 883 aa14.9□□□□□ -0.02
LDLR-212ENST00000560467 NOGQ13253 232 aa14.9□□□□□ -0.02
LDLR-212ENST00000560467 SF3B3Q15393 1217 aaKnown RBP14.9□□□□□ -0.02
LDLR-212ENST00000560467 RBM26Q5T8P6 1007 aaKnown RBP14.9□□□□□ -0.02
LDLR-212ENST00000560467 ZKSCAN2Q63HK3 967 aa14.9□□□□□ -0.02
LDLR-212ENST00000560467 DPF2Q92785 391 aa14.9□□□□□ -0.02
LDLR-212ENST00000560467 ANKRD36CQ5JPF3 1778 aa14.9□□□□□ -0.02
LDLR-212ENST00000560467 BCAR3O75815 825 aa14.89□□□□□ -0.03
LDLR-212ENST00000560467 SLC34A2O95436 690 aa14.89□□□□□ -0.03
LDLR-212ENST00000560467 RGS19P49795 217 aa14.89□□□□□ -0.03
LDLR-212ENST00000560467 DGKZQ13574 1117 aa14.89□□□□□ -0.03
LDLR-212ENST00000560467 ERICH6BQ5W0A0 696 aa14.89□□□□□ -0.03
LDLR-212ENST00000560467 ANKRD13DQ6ZTN6 518 aa14.89□□□□□ -0.03
LDLR-212ENST00000560467 FTSJ3Q8IY81 847 aaKnown RBP14.89□□□□□ -0.03
LDLR-212ENST00000560467 TSPYL6Q8N831 410 aa14.89□□□□□ -0.03
LDLR-212ENST00000560467 SSH1Q8WYL5 1049 aa14.89□□□□□ -0.03
LDLR-212ENST00000560467 LRRC37AA6NMS7 1700 aa14.89□□□□□ -0.03
LDLR-212ENST00000560467 FAM155AB1AL88 458 aaPredicted RBP14.88□□□□□ -0.03
LDLR-212ENST00000560467 IRS4O14654 1257 aaPredicted RBP14.88□□□□□ -0.03
LDLR-212ENST00000560467 TBC1D16Q8TBP0 767 aa14.88□□□□□ -0.03
LDLR-212ENST00000560467 GBA2Q9HCG7 927 aaPredicted RBP14.88□□□□□ -0.03
LDLR-212ENST00000560467 ASTN2O75129 1339 aaPredicted RBP14.88□□□□□ -0.03
LDLR-212ENST00000560467 SLC4A2P04920 1241 aa14.87□□□□□ -0.03
LDLR-212ENST00000560467 RPS12P25398 132 aaKnown RBP14.87□□□□□ -0.03
LDLR-212ENST00000560467 RGMBQ6NW40 437 aa14.87□□□□□ -0.03
LDLR-212ENST00000560467 API5Q9BZZ5 524 aaKnown RBP14.87□□□□□ -0.03
LDLR-212ENST00000560467 CHMP4BQ9H444 224 aaKnown RBP14.87□□□□□ -0.03
LDLR-212ENST00000560467 DBF4Q9UBU7 674 aaPredicted RBP14.87□□□□□ -0.03
LDLR-212ENST00000560467 TAF1P21675 1872 aa14.86□□□□□ -0.03
LDLR-212ENST00000560467 RPS8P62241 208 aaKnown RBP14.86□□□□□ -0.03
LDLR-212ENST00000560467 PDE3AQ14432 1141 aa14.86□□□□□ -0.03
LDLR-212ENST00000560467 KIF4BQ2VIQ3 1234 aa14.86□□□□□ -0.03
LDLR-212ENST00000560467 ARHGAP45Q92619 1136 aa14.86□□□□□ -0.03
LDLR-212ENST00000560467 DCPSQ96C86 337 aaKnown RBP14.86□□□□□ -0.03
LDLR-212ENST00000560467 EYA3Q99504 573 aa14.86□□□□□ -0.03
LDLR-212ENST00000560467 SEC31BQ9NQW1 1179 aa14.86□□□□□ -0.03
LDLR-212ENST00000560467 GGA3Q9NZ52 723 aa14.86□□□□□ -0.03
LDLR-212ENST00000560467 NOB1Q9ULX3 412 aaKnown RBP14.86□□□□□ -0.03
LDLR-212ENST00000560467 GTF3C3Q9Y5Q9 886 aa14.86□□□□□ -0.03
LDLR-212ENST00000560467 DDX60Q8IY21 1712 aaKnown RBP14.86□□□□□ -0.03
LDLR-212ENST00000560467 UFL1O94874 794 aa14.85□□□□□ -0.03
LDLR-212ENST00000560467 KIF23Q02241 960 aaPredicted RBP14.85□□□□□ -0.03
LDLR-212ENST00000560467 TRIM28Q13263 835 aaKnown RBP14.85□□□□□ -0.03
LDLR-212ENST00000560467 C2orf69Q8N8R5 385 aa14.85□□□□□ -0.03
LDLR-212ENST00000560467 HYPKQ9NX55 129 aa14.85□□□□□ -0.03
LDLR-212ENST00000560467 VIL1P09327 827 aaKnown RBP14.84□□□□□ -0.03
LDLR-212ENST00000560467 ZNF157P51786 506 aaPredicted RBP14.84□□□□□ -0.03
LDLR-212ENST00000560467 MRPL50Q8N5N7 158 aaKnown RBP14.84□□□□□ -0.03
LDLR-212ENST00000560467 JARID2Q92833 1246 aaPredicted RBP14.84□□□□□ -0.03
LDLR-212ENST00000560467 PTPRCP08575 1304 aa14.84□□□□□ -0.03
LDLR-212ENST00000560467 PLIN1O60240 522 aa14.83□□□□□ -0.04
LDLR-212ENST00000560467 DDX58O95786 925 aaKnown RBP14.83□□□□□ -0.04
LDLR-212ENST00000560467 ATF7IPQ6VMQ6 1270 aa14.83□□□□□ -0.04
LDLR-212ENST00000560467 RIC3Q7Z5B4 369 aa14.83□□□□□ -0.04
LDLR-212ENST00000560467 SULF1Q8IWU6 871 aa14.83□□□□□ -0.04
LDLR-212ENST00000560467 DZIP1LQ8IYY4 767 aaKnown RBP14.83□□□□□ -0.04
LDLR-212ENST00000560467 ZBTB38Q8NAP3 1195 aaPredicted RBP14.83□□□□□ -0.04
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