RNA–Protein interactions for RNA: ENST00000560357.5

HMBOX1-214, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 979 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-214ENST00000560357 ANKRD18BA2A2Z9 1011 aa8.93□□□□□ -0.98
HMBOX1-214ENST00000560357 EYA2O00167 538 aa8.93□□□□□ -0.98
HMBOX1-214ENST00000560357 CCDC152Q4G0S7 254 aa8.93□□□□□ -0.98
HMBOX1-214ENST00000560357 PRR5LQ6MZQ0 368 aa8.93□□□□□ -0.98
HMBOX1-214ENST00000560357 CCDC24Q8N4L8 307 aa8.93□□□□□ -0.98
HMBOX1-214ENST00000560357 CNBD1Q8NA66 436 aa8.93□□□□□ -0.98
HMBOX1-214ENST00000560357 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.93□□□□□ -0.98
HMBOX1-214ENST00000560357 SALL3Q9BXA9 1300 aa8.93□□□□□ -0.98
HMBOX1-214ENST00000560357 CASZ1Q86V15 1759 aa8.93□□□□□ -0.98
HMBOX1-214ENST00000560357 RIC1Q4ADV7 1423 aa8.92□□□□□ -0.98
HMBOX1-214ENST00000560357 IL15P40933 162 aaPredicted RBP8.92□□□□□ -0.98
HMBOX1-214ENST00000560357 NUBP1P53384 320 aa8.92□□□□□ -0.98
HMBOX1-214ENST00000560357 TFCP2Q12800 502 aa8.92□□□□□ -0.98
HMBOX1-214ENST00000560357 LRRC24Q50LG9 513 aa8.92□□□□□ -0.98
HMBOX1-214ENST00000560357 TAF7LQ5H9L4 462 aa8.92□□□□□ -0.98
HMBOX1-214ENST00000560357 ASTLQ6HA08 431 aaPredicted RBP8.92□□□□□ -0.98
HMBOX1-214ENST00000560357 CLASRPQ8N2M8 674 aaKnown RBP8.92□□□□□ -0.98
HMBOX1-214ENST00000560357 NLRP3Q96P20 1036 aa8.92□□□□□ -0.98
HMBOX1-214ENST00000560357 BCL11AQ9H165 835 aa8.92□□□□□ -0.98
HMBOX1-214ENST00000560357 OSBPL3Q9H4L5 887 aa8.92□□□□□ -0.98
HMBOX1-214ENST00000560357 SEC31BQ9NQW1 1179 aa8.92□□□□□ -0.98
HMBOX1-214ENST00000560357 RIPOR2Q9Y4F9 1068 aa8.92□□□□□ -0.98
HMBOX1-214ENST00000560357 NRXN2Q9P2S2 1712 aa8.91□□□□□ -0.98
HMBOX1-214ENST00000560357 NPHP1O15259 732 aa8.91□□□□□ -0.98
HMBOX1-214ENST00000560357 MMP10P09238 476 aa8.91□□□□□ -0.98
HMBOX1-214ENST00000560357 PDE1AP54750 535 aa8.91□□□□□ -0.98
HMBOX1-214ENST00000560357 LDHAL6AQ6ZMR3 332 aa8.91□□□□□ -0.98
HMBOX1-214ENST00000560357 EAF2Q96CJ1 260 aaPredicted RBP8.91□□□□□ -0.98
HMBOX1-214ENST00000560357 PDGFDQ9GZP0 370 aaPredicted RBP8.91□□□□□ -0.98
HMBOX1-214ENST00000560357 GPR108Q9NPR9 543 aa8.91□□□□□ -0.98
HMBOX1-214ENST00000560357 STAP2Q9UGK3 403 aa8.91□□□□□ -0.98
HMBOX1-214ENST00000560357 TNRC6CQ9HCJ0 1690 aaKnown RBP8.91□□□□□ -0.98
HMBOX1-214ENST00000560357 TAF1P21675 1872 aa8.9□□□□□ -0.98
HMBOX1-214ENST00000560357 MX1P20591 662 aa8.9□□□□□ -0.98
HMBOX1-214ENST00000560357 ST5P78524 1137 aa8.9□□□□□ -0.98
HMBOX1-214ENST00000560357 MSL1Q68DK7 614 aa8.9□□□□□ -0.98
HMBOX1-214ENST00000560357 AACSQ86V21 672 aa8.9□□□□□ -0.98
HMBOX1-214ENST00000560357 CDC5LQ99459 802 aaKnown RBP8.9□□□□□ -0.98
HMBOX1-214ENST00000560357 CNNM1Q9NRU3 951 aa8.9□□□□□ -0.98
HMBOX1-214ENST00000560357 CEP126Q9P2H0 1117 aa8.9□□□□□ -0.98
HMBOX1-214ENST00000560357 PARP3Q9Y6F1 533 aa8.9□□□□□ -0.98
HMBOX1-214ENST00000560357 COL4A1P02462 1669 aa8.9□□□□□ -0.98
HMBOX1-214ENST00000560357 LRP5O75197 1615 aa8.9□□□□□ -0.99
HMBOX1-214ENST00000560357 AOX1Q06278 1338 aa8.89□□□□□ -0.99
HMBOX1-214ENST00000560357 KLRG2A4D1S0 409 aaPredicted RBP8.89□□□□□ -0.99
HMBOX1-214ENST00000560357 ATMINO43313 823 aaPredicted RBP8.89□□□□□ -0.99
HMBOX1-214ENST00000560357 IFIT2P09913 472 aaKnown RBP8.89□□□□□ -0.99
HMBOX1-214ENST00000560357 IGHMBP2P38935 993 aaKnown RBP8.89□□□□□ -0.99
HMBOX1-214ENST00000560357 CRY2Q49AN0 593 aa8.89□□□□□ -0.99
HMBOX1-214ENST00000560357 TNNI3KQ59H18 835 aa8.89□□□□□ -0.99
HMBOX1-214ENST00000560357 BMP2KLQ5H9B9 411 aa8.89□□□□□ -0.99
HMBOX1-214ENST00000560357 TTC22Q5TAA0 569 aa8.89□□□□□ -0.99
HMBOX1-214ENST00000560357 SLC16A10Q8TF71 515 aa8.89□□□□□ -0.99
HMBOX1-214ENST00000560357 MPHOSPH8Q99549 860 aa8.89□□□□□ -0.99
HMBOX1-214ENST00000560357 CCDC8Q9H0W5 538 aaPredicted RBP8.89□□□□□ -0.99
HMBOX1-214ENST00000560357 FPGT-TNNI3KV9GXZ4 949 aa8.89□□□□□ -0.99
HMBOX1-214ENST00000560357 ANKRD31Q8N7Z5 1873 aa8.88□□□□□ -0.99
HMBOX1-214ENST00000560357 GSPT1P15170 499 aaKnown RBP8.88□□□□□ -0.99
HMBOX1-214ENST00000560357 TIMM10P62072 90 aa8.88□□□□□ -0.99
HMBOX1-214ENST00000560357 RPS8P62241 208 aaKnown RBP8.88□□□□□ -0.99
HMBOX1-214ENST00000560357 METTL24Q5JXM2 366 aa8.88□□□□□ -0.99
HMBOX1-214ENST00000560357 TSHZ3Q63HK5 1081 aa8.88□□□□□ -0.99
HMBOX1-214ENST00000560357 DDX46Q7L014 1031 aaKnown RBP8.88□□□□□ -0.99
HMBOX1-214ENST00000560357 ANKRD18AQ8IVF6 992 aa8.88□□□□□ -0.99
HMBOX1-214ENST00000560357 VGLL2Q8N8G2 317 aa8.88□□□□□ -0.99
HMBOX1-214ENST00000560357 PI4K2BQ8TCG2 481 aa8.88□□□□□ -0.99
HMBOX1-214ENST00000560357 CELF1Q92879 486 aaKnown RBP8.88□□□□□ -0.99
HMBOX1-214ENST00000560357 SGIP1Q9BQI5 828 aa8.88□□□□□ -0.99
HMBOX1-214ENST00000560357 BRIP1Q9BX63 1249 aa8.88□□□□□ -0.99
HMBOX1-214ENST00000560357 BSDC1Q9NW68 430 aaPredicted RBP8.88□□□□□ -0.99
HMBOX1-214ENST00000560357 TLR7Q9NYK1 1049 aaKnown RBP8.88□□□□□ -0.99
HMBOX1-214ENST00000560357 DBNLQ9UJU6 430 aaKnown RBP8.88□□□□□ -0.99
HMBOX1-214ENST00000560357 AKAP2Q9Y2D5 859 aa8.88□□□□□ -0.99
HMBOX1-214ENST00000560357 SPEF2Q9C093 1822 aa8.88□□□□□ -0.99
HMBOX1-214ENST00000560357 TTC41PQ6P2S7 1318 aa8.87□□□□□ -0.99
HMBOX1-214ENST00000560357 MROH5Q6ZUA9 1318 aa8.87□□□□□ -0.99
HMBOX1-214ENST00000560357 A0A1B0GUL7 405 aa8.87□□□□□ -0.99
HMBOX1-214ENST00000560357 PDE8BO95263 885 aa8.87□□□□□ -0.99
HMBOX1-214ENST00000560357 SDSP20132 328 aa8.87□□□□□ -0.99
HMBOX1-214ENST00000560357 HOXA10P31260 410 aaPredicted RBP8.87□□□□□ -0.99
HMBOX1-214ENST00000560357 C8orf34Q49A92 452 aa8.87□□□□□ -0.99
HMBOX1-214ENST00000560357 HELBQ8NG08 1087 aaPredicted RBP8.87□□□□□ -0.99
HMBOX1-214ENST00000560357 DBNDD2Q9BQY9 259 aa8.87□□□□□ -0.99
HMBOX1-214ENST00000560357 BACH2Q9BYV9 841 aa8.87□□□□□ -0.99
HMBOX1-214ENST00000560357 ECHDC1Q9NTX5 307 aa8.87□□□□□ -0.99
HMBOX1-214ENST00000560357 ZNF609O15014 1411 aa8.87□□□□□ -0.99
HMBOX1-214ENST00000560357 ERC2O15083 957 aa8.86□□□□□ -0.99
HMBOX1-214ENST00000560357 MAP3K13O43283 966 aa8.86□□□□□ -0.99
HMBOX1-214ENST00000560357 FGFR2P21802 821 aa8.86□□□□□ -0.99
HMBOX1-214ENST00000560357 PDE6BP35913 854 aa8.86□□□□□ -0.99
HMBOX1-214ENST00000560357 CHRNDQ07001 517 aa8.86□□□□□ -0.99
HMBOX1-214ENST00000560357 GRAPQ13588 217 aa8.86□□□□□ -0.99
HMBOX1-214ENST00000560357 ATP2B3Q16720 1220 aa8.86□□□□□ -0.99
HMBOX1-214ENST00000560357 ILDR2Q71H61 639 aa8.86□□□□□ -0.99
HMBOX1-214ENST00000560357 GRAPLQ8TC17 118 aaPredicted RBP8.86□□□□□ -0.99
HMBOX1-214ENST00000560357 RPGRQ92834 1020 aaKnown RBP8.86□□□□□ -0.99
HMBOX1-214ENST00000560357 RBM17Q96I25 401 aaKnown RBP8.86□□□□□ -0.99
HMBOX1-214ENST00000560357 GPATCH3Q96I76 525 aa8.86□□□□□ -0.99
HMBOX1-214ENST00000560357 NEUROD6Q96NK8 337 aa8.86□□□□□ -0.99
HMBOX1-214ENST00000560357 CRAMP1Q96RY5 1269 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms