RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 MICALL2Q8IY33 904 aa26.37■■□□□ 1.81
TSPAN3-206ENST00000559373 STK31Q9BXU1 1019 aa26.37■■□□□ 1.81
TSPAN3-206ENST00000559373 WDR33Q9C0J8 1336 aaKnown RBP26.37■■□□□ 1.81
TSPAN3-206ENST00000559373 CCDC152Q4G0S7 254 aa26.36■■□□□ 1.81
TSPAN3-206ENST00000559373 SAMD7Q7Z3H4 446 aa26.36■■□□□ 1.81
TSPAN3-206ENST00000559373 ANKIB1Q9P2G1 1089 aa26.36■■□□□ 1.81
TSPAN3-206ENST00000559373 ZNF316A6NFI3 1004 aaPredicted RBP26.35■■□□□ 1.81
TSPAN3-206ENST00000559373 ANP32CO43423 234 aa26.35■■□□□ 1.81
TSPAN3-206ENST00000559373 UFL1O94874 794 aa26.35■■□□□ 1.81
TSPAN3-206ENST00000559373 SLC4A2P04920 1241 aa26.35■■□□□ 1.81
TSPAN3-206ENST00000559373 CCDC27Q2M243 656 aa26.35■■□□□ 1.81
TSPAN3-206ENST00000559373 CYP4F22Q6NT55 531 aa26.35■■□□□ 1.81
TSPAN3-206ENST00000559373 ZNF408Q9H9D4 720 aa26.35■■□□□ 1.81
TSPAN3-206ENST00000559373 EGFRP00533 1210 aa26.34■■□□□ 1.81
TSPAN3-206ENST00000559373 RBM26Q5T8P6 1007 aaKnown RBP26.34■■□□□ 1.81
TSPAN3-206ENST00000559373 RTL9Q8NET4 1388 aa26.33■■□□□ 1.81
TSPAN3-206ENST00000559373 WTIPA6NIX2 430 aaPredicted RBP26.33■■□□□ 1.81
TSPAN3-206ENST00000559373 H7C1D1 291 aa26.33■■□□□ 1.81
TSPAN3-206ENST00000559373 CELF2O95319 508 aaKnown RBP26.33■■□□□ 1.81
TSPAN3-206ENST00000559373 TBC1D10BQ4KMP7 808 aaPredicted RBP26.33■■□□□ 1.81
TSPAN3-206ENST00000559373 AIDAQ96BJ3 306 aa26.33■■□□□ 1.81
TSPAN3-206ENST00000559373 EYA3Q99504 573 aa26.33■■□□□ 1.81
TSPAN3-206ENST00000559373 ZEB1P37275 1124 aaPredicted RBP26.32■■□□□ 1.8
TSPAN3-206ENST00000559373 ZC3H12CQ9C0D7 883 aaKnown RBP26.32■■□□□ 1.8
TSPAN3-206ENST00000559373 G3V3G9 751 aa26.31■■□□□ 1.8
TSPAN3-206ENST00000559373 HSP90B1P14625 803 aaKnown RBP26.31■■□□□ 1.8
TSPAN3-206ENST00000559373 DCAF8Q5TAQ9 597 aa26.31■■□□□ 1.8
TSPAN3-206ENST00000559373 CAPNS2Q96L46 248 aa26.31■■□□□ 1.8
TSPAN3-206ENST00000559373 WBP1LQ9NX94 342 aa26.31■■□□□ 1.8
TSPAN3-206ENST00000559373 GGA1Q9UJY5 639 aa26.31■■□□□ 1.8
TSPAN3-206ENST00000559373 CDHR2Q9BYE9 1310 aa26.31■■□□□ 1.8
TSPAN3-206ENST00000559373 FANCIQ9NVI1 1328 aa26.31■■□□□ 1.8
TSPAN3-206ENST00000559373 CTSWP56202 376 aa26.3■■□□□ 1.8
TSPAN3-206ENST00000559373 NEXNQ0ZGT2 675 aa26.3■■□□□ 1.8
TSPAN3-206ENST00000559373 USP48Q86UV5 1035 aa26.3■■□□□ 1.8
TSPAN3-206ENST00000559373 ANKRD18AQ8IVF6 992 aa26.3■■□□□ 1.8
TSPAN3-206ENST00000559373 CHMP4AQ9BY43 222 aa26.3■■□□□ 1.8
TSPAN3-206ENST00000559373 GREM2Q9H772 168 aa26.3■■□□□ 1.8
TSPAN3-206ENST00000559373 PGAP2Q9UHJ9 254 aa26.3■■□□□ 1.8
TSPAN3-206ENST00000559373 NEURL1BA8MQ27 555 aa26.29■■□□□ 1.8
TSPAN3-206ENST00000559373 LBX1P52954 281 aa26.29■■□□□ 1.8
TSPAN3-206ENST00000559373 UBE3BQ7Z3V4 1068 aa26.29■■□□□ 1.8
TSPAN3-206ENST00000559373 PODXL2Q9NZ53 605 aa26.29■■□□□ 1.8
TSPAN3-206ENST00000559373 TLL2Q9Y6L7 1015 aa26.29■■□□□ 1.8
TSPAN3-206ENST00000559373 THSD7BQ9C0I4 1608 aa26.28■■□□□ 1.8
TSPAN3-206ENST00000559373 AOC2O75106 756 aa26.28■■□□□ 1.8
TSPAN3-206ENST00000559373 TTLL11Q8NHH1 800 aa26.28■■□□□ 1.8
TSPAN3-206ENST00000559373 IL16Q14005 1332 aa26.28■■□□□ 1.8
TSPAN3-206ENST00000559373 ZNF646O15015 1829 aaPredicted RBP26.28■■□□□ 1.8
TSPAN3-206ENST00000559373 EXOSC9Q06265 439 aaKnown RBP26.27■■□□□ 1.8
TSPAN3-206ENST00000559373 FLIIQ13045 1269 aa26.27■■□□□ 1.8
TSPAN3-206ENST00000559373 FAM9BQ8IZU0 186 aa26.27■■□□□ 1.8
TSPAN3-206ENST00000559373 DPF2Q92785 391 aa26.27■■□□□ 1.8
TSPAN3-206ENST00000559373 CASP8AP2Q9UKL3 1982 aa26.26■■□□□ 1.79
TSPAN3-206ENST00000559373 CTCFP49711 727 aaPredicted RBP26.26■■□□□ 1.79
TSPAN3-206ENST00000559373 FKBP5Q13451 457 aaPredicted RBP26.26■■□□□ 1.79
TSPAN3-206ENST00000559373 CDC37L1Q7L3B6 337 aa26.26■■□□□ 1.79
TSPAN3-206ENST00000559373 ZC3H15Q8WU90 426 aaKnown RBP26.26■■□□□ 1.79
TSPAN3-206ENST00000559373 SPINK5Q9NQ38 1064 aaPredicted RBP26.26■■□□□ 1.79
TSPAN3-206ENST00000559373 ASTN2O75129 1339 aaPredicted RBP26.24■■□□□ 1.79
TSPAN3-206ENST00000559373 XDHP47989 1333 aa26.24■■□□□ 1.79
TSPAN3-206ENST00000559373 H7C1W4 665 aa26.24■■□□□ 1.79
TSPAN3-206ENST00000559373 VAMP4O75379 141 aa26.24■■□□□ 1.79
TSPAN3-206ENST00000559373 VIL1P09327 827 aaKnown RBP26.24■■□□□ 1.79
TSPAN3-206ENST00000559373 SAPCD2Q86UD0 394 aa26.24■■□□□ 1.79
TSPAN3-206ENST00000559373 CDC5LQ99459 802 aaKnown RBP26.24■■□□□ 1.79
TSPAN3-206ENST00000559373 A0A1B0GUL6 1792 aa26.24■■□□□ 1.79
TSPAN3-206ENST00000559373 ADM5C9JUS6 153 aa26.23■■□□□ 1.79
TSPAN3-206ENST00000559373 HSPA8P11142 646 aaKnown RBP26.23■■□□□ 1.79
TSPAN3-206ENST00000559373 TSKSQ9UJT2 592 aa26.23■■□□□ 1.79
TSPAN3-206ENST00000559373 RPS12P25398 132 aaKnown RBP26.22■■□□□ 1.79
TSPAN3-206ENST00000559373 ECE1P42892 770 aa26.22■■□□□ 1.79
TSPAN3-206ENST00000559373 GCKRQ14397 625 aa26.22■■□□□ 1.79
TSPAN3-206ENST00000559373 MINPP1Q9UNW1 487 aa26.22■■□□□ 1.79
TSPAN3-206ENST00000559373 F6X3S4 739 aa26.21■■□□□ 1.79
TSPAN3-206ENST00000559373 ATP2B4P23634 1241 aa26.21■■□□□ 1.79
TSPAN3-206ENST00000559373 MAP2K1Q02750 393 aaPredicted RBP26.21■■□□□ 1.79
TSPAN3-206ENST00000559373 KIF4BQ2VIQ3 1234 aa26.21■■□□□ 1.79
TSPAN3-206ENST00000559373 KRT26Q7Z3Y9 468 aa26.21■■□□□ 1.79
TSPAN3-206ENST00000559373 DNAAF4Q8WXU2 420 aa26.21■■□□□ 1.79
TSPAN3-206ENST00000559373 PRDM10Q9NQV6 1147 aa26.21■■□□□ 1.79
TSPAN3-206ENST00000559373 WDR63Q8IWG1 891 aa26.2■■□□□ 1.78
TSPAN3-206ENST00000559373 MXD3Q9BW11 206 aa26.2■■□□□ 1.78
TSPAN3-206ENST00000559373 FAM161AQ3B820 660 aa26.19■■□□□ 1.78
TSPAN3-206ENST00000559373 DCPSQ96C86 337 aaKnown RBP26.19■■□□□ 1.78
TSPAN3-206ENST00000559373 BSDC1Q9NW68 430 aaPredicted RBP26.19■■□□□ 1.78
TSPAN3-206ENST00000559373 SCAF8Q9UPN6 1271 aaKnown RBP26.19■■□□□ 1.78
TSPAN3-206ENST00000559373 ITGA6P23229 1130 aa26.18■■□□□ 1.78
TSPAN3-206ENST00000559373 CASP7P55210 303 aa26.18■■□□□ 1.78
TSPAN3-206ENST00000559373 RSBN1LQ6PCB5 846 aaPredicted RBP26.18■■□□□ 1.78
TSPAN3-206ENST00000559373 FBXW7Q969H0 707 aa26.18■■□□□ 1.78
TSPAN3-206ENST00000559373 AKAP11Q9UKA4 1901 aa26.18■■□□□ 1.78
TSPAN3-206ENST00000559373 CCT4P50991 539 aaKnown RBP26.17■■□□□ 1.78
TSPAN3-206ENST00000559373 TXNRD3Q86VQ6 643 aa26.17■■□□□ 1.78
TSPAN3-206ENST00000559373 GGA3Q9NZ52 723 aa26.17■■□□□ 1.78
TSPAN3-206ENST00000559373 NCBP3Q53F19 620 aaKnown RBP26.16■■□□□ 1.78
TSPAN3-206ENST00000559373 ZIC5Q96T25 663 aa26.16■■□□□ 1.78
TSPAN3-206ENST00000559373 KLRK1P26718 216 aa26.15■■□□□ 1.78
TSPAN3-206ENST00000559373 IGHMBP2P38935 993 aaKnown RBP26.15■■□□□ 1.78
TSPAN3-206ENST00000559373 HUNKP57058 714 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms