RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 COG6Q9Y2V7 657 aa14.38□□□□□ -0.11
SNX1-204ENST00000559061 PSME4Q14997 1843 aa14.37□□□□□ -0.11
SNX1-204ENST00000559061 ANKRD18BA2A2Z9 1011 aa14.37□□□□□ -0.11
SNX1-204ENST00000559061 IFIT5Q13325 482 aaKnown RBP14.37□□□□□ -0.11
SNX1-204ENST00000559061 MTX1Q13505 466 aa14.37□□□□□ -0.11
SNX1-204ENST00000559061 MVPQ14764 893 aaKnown RBP14.37□□□□□ -0.11
SNX1-204ENST00000559061 TBC1D16Q8TBP0 767 aa14.37□□□□□ -0.11
SNX1-204ENST00000559061 CHMP3Q9Y3E7 222 aa14.37□□□□□ -0.11
SNX1-204ENST00000559061 PNMA6EA0A0J9YXQ4 647 aa14.36□□□□□ -0.11
SNX1-204ENST00000559061 SNAP23O00161 211 aa14.36□□□□□ -0.11
SNX1-204ENST00000559061 KLRK1P26718 216 aa14.36□□□□□ -0.11
SNX1-204ENST00000559061 IARSP41252 1262 aaKnown RBP14.36□□□□□ -0.11
SNX1-204ENST00000559061 PTPN12Q05209 780 aaKnown RBP14.36□□□□□ -0.11
SNX1-204ENST00000559061 LRRC24Q50LG9 513 aa14.36□□□□□ -0.11
SNX1-204ENST00000559061 DPP8Q6V1X1 898 aaPredicted RBP14.36□□□□□ -0.11
SNX1-204ENST00000559061 MPNDQ8N594 471 aa14.36□□□□□ -0.11
SNX1-204ENST00000559061 RIPOR2Q9Y4F9 1068 aa14.36□□□□□ -0.11
SNX1-204ENST00000559061 ZNF541Q9H0D2 1346 aa14.36□□□□□ -0.11
SNX1-204ENST00000559061 GNAI3P08754 354 aa14.35□□□□□ -0.11
SNX1-204ENST00000559061 YY1P25490 414 aa14.35□□□□□ -0.11
SNX1-204ENST00000559061 CHRNDQ07001 517 aa14.35□□□□□ -0.11
SNX1-204ENST00000559061 PDE3AQ14432 1141 aa14.35□□□□□ -0.11
SNX1-204ENST00000559061 AOC3Q16853 763 aa14.35□□□□□ -0.11
SNX1-204ENST00000559061 VGLL2Q8N8G2 317 aa14.35□□□□□ -0.11
SNX1-204ENST00000559061 NSFL1CQ9UNZ2 370 aaKnown RBP14.35□□□□□ -0.11
SNX1-204ENST00000559061 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.35□□□□□ -0.11
SNX1-204ENST00000559061 IGHMBP2P38935 993 aaKnown RBP14.34□□□□□ -0.11
SNX1-204ENST00000559061 KIAA2012Q0VF49 1180 aa14.34□□□□□ -0.11
SNX1-204ENST00000559061 CCDC57Q2TAC2 916 aa14.34□□□□□ -0.11
SNX1-204ENST00000559061 GRIPAP1Q4V328 841 aa14.34□□□□□ -0.11
SNX1-204ENST00000559061 ATG9AQ7Z3C6 839 aa14.34□□□□□ -0.11
SNX1-204ENST00000559061 TXNRD3Q86VQ6 643 aa14.34□□□□□ -0.11
SNX1-204ENST00000559061 HELBQ8NG08 1087 aaPredicted RBP14.34□□□□□ -0.11
SNX1-204ENST00000559061 ZBTB40Q9NUA8 1239 aa14.34□□□□□ -0.11
SNX1-204ENST00000559061 PA2G4Q9UQ80 394 aaKnown RBP14.34□□□□□ -0.11
SNX1-204ENST00000559061 ARAP2Q8WZ64 1704 aa14.34□□□□□ -0.11
SNX1-204ENST00000559061 WDR90Q96KV7 1748 aa14.34□□□□□ -0.11
SNX1-204ENST00000559061 XDHP47989 1333 aa14.34□□□□□ -0.11
SNX1-204ENST00000559061 YDJCA8MPS7 323 aa14.33□□□□□ -0.12
SNX1-204ENST00000559061 FZD9O00144 591 aa14.33□□□□□ -0.12
SNX1-204ENST00000559061 TAF5LO75529 589 aa14.33□□□□□ -0.12
SNX1-204ENST00000559061 GNAI2P04899 355 aa14.33□□□□□ -0.12
SNX1-204ENST00000559061 POLA2Q14181 598 aa14.33□□□□□ -0.12
SNX1-204ENST00000559061 UFL1O94874 794 aa14.32□□□□□ -0.12
SNX1-204ENST00000559061 CEP85Q6P2H3 762 aa14.32□□□□□ -0.12
SNX1-204ENST00000559061 SIRT2Q8IXJ6 389 aa14.32□□□□□ -0.12
SNX1-204ENST00000559061 ZNF784Q8NCA9 323 aaPredicted RBP14.32□□□□□ -0.12
SNX1-204ENST00000559061 ZC3H4Q9UPT8 1303 aaKnown RBP14.32□□□□□ -0.12
SNX1-204ENST00000559061 PPIP5K2O43314 1243 aa14.31□□□□□ -0.12
SNX1-204ENST00000559061 LDHAL6AQ6ZMR3 332 aa14.31□□□□□ -0.12
SNX1-204ENST00000559061 MPHOSPH8Q99549 860 aa14.31□□□□□ -0.12
SNX1-204ENST00000559061 COPRSQ9NQ92 184 aa14.31□□□□□ -0.12
SNX1-204ENST00000559061 GGA1Q9UJY5 639 aa14.31□□□□□ -0.12
SNX1-204ENST00000559061 MED23Q9ULK4 1368 aa14.31□□□□□ -0.12
SNX1-204ENST00000559061 POTECB2RU33 542 aa14.3□□□□□ -0.12
SNX1-204ENST00000559061 EYA2O00167 538 aa14.3□□□□□ -0.12
SNX1-204ENST00000559061 RIMBP2O15034 1052 aa14.3□□□□□ -0.12
SNX1-204ENST00000559061 SRGAP3O43295 1099 aa14.3□□□□□ -0.12
SNX1-204ENST00000559061 ATP2B4P23634 1241 aa14.3□□□□□ -0.12
SNX1-204ENST00000559061 ATP8B2P98198 1209 aa14.3□□□□□ -0.12
SNX1-204ENST00000559061 LARGE2Q8N3Y3 721 aa14.3□□□□□ -0.12
SNX1-204ENST00000559061 SSH3Q8TE77 659 aa14.3□□□□□ -0.12
SNX1-204ENST00000559061 KCNQ5Q9NR82 932 aa14.3□□□□□ -0.12
SNX1-204ENST00000559061 ANKIB1Q9P2G1 1089 aa14.3□□□□□ -0.12
SNX1-204ENST00000559061 DDX19BQ9UMR2 479 aa14.3□□□□□ -0.12
SNX1-204ENST00000559061 C6orf229H3BNL8 230 aa14.29□□□□□ -0.12
SNX1-204ENST00000559061 MS4A1P11836 297 aa14.29□□□□□ -0.12
SNX1-204ENST00000559061 FGFR2P21802 821 aa14.29□□□□□ -0.12
SNX1-204ENST00000559061 WASHC4Q2M389 1173 aa14.29□□□□□ -0.12
SNX1-204ENST00000559061 TAF7LQ5H9L4 462 aa14.29□□□□□ -0.12
SNX1-204ENST00000559061 SUPT20HQ8NEM7 779 aa14.29□□□□□ -0.12
SNX1-204ENST00000559061 CRBNQ96SW2 442 aa14.29□□□□□ -0.12
SNX1-204ENST00000559061 SIL1Q9H173 461 aa14.29□□□□□ -0.12
SNX1-204ENST00000559061 VPS33BQ9H267 617 aa14.29□□□□□ -0.12
SNX1-204ENST00000559061 DBNDD1Q9H9R9 158 aa14.29□□□□□ -0.12
SNX1-204ENST00000559061 CNNM1Q9NRU3 951 aa14.29□□□□□ -0.12
SNX1-204ENST00000559061 ZNF804BA4D1E1 1349 aa14.29□□□□□ -0.12
SNX1-204ENST00000559061 CIAO1O76071 339 aa14.28□□□□□ -0.12
SNX1-204ENST00000559061 DOK7Q18PE1 504 aa14.28□□□□□ -0.12
SNX1-204ENST00000559061 C15orf52Q6ZUT6 534 aaKnown RBP14.28□□□□□ -0.12
SNX1-204ENST00000559061 ADAMTSL1Q8N6G6 1762 aa14.28□□□□□ -0.12
SNX1-204ENST00000559061 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.28□□□□□ -0.12
SNX1-204ENST00000559061 ANKRD2Q9GZV1 360 aa14.28□□□□□ -0.12
SNX1-204ENST00000559061 LEMD3Q9Y2U8 911 aa14.28□□□□□ -0.12
SNX1-204ENST00000559061 SUPT16HQ9Y5B9 1047 aaKnown RBP14.28□□□□□ -0.12
SNX1-204ENST00000559061 MROH5Q6ZUA9 1318 aa14.27□□□□□ -0.12
SNX1-204ENST00000559061 GLTPD2A6NH11 291 aa14.27□□□□□ -0.13
SNX1-204ENST00000559061 ECE2O60344 883 aa14.27□□□□□ -0.13
SNX1-204ENST00000559061 DDNO94850 711 aaPredicted RBP14.27□□□□□ -0.13
SNX1-204ENST00000559061 CXCL9Q07325 125 aa14.27□□□□□ -0.13
SNX1-204ENST00000559061 ZNF526Q8TF50 670 aaPredicted RBP14.27□□□□□ -0.13
SNX1-204ENST00000559061 NMRK2Q9NPI5 230 aa14.27□□□□□ -0.13
SNX1-204ENST00000559061 SCN4AP35499 1836 aa14.27□□□□□ -0.13
SNX1-204ENST00000559061 COL1A1P02452 1464 aaPredicted RBP14.26□□□□□ -0.13
SNX1-204ENST00000559061 SASH1O94885 1247 aa14.26□□□□□ -0.13
SNX1-204ENST00000559061 PDE8BO95263 885 aa14.26□□□□□ -0.13
SNX1-204ENST00000559061 NIM1KQ8IY84 436 aa14.26□□□□□ -0.13
SNX1-204ENST00000559061 TMX4Q9H1E5 349 aaPredicted RBP14.26□□□□□ -0.13
SNX1-204ENST00000559061 ZNRF3Q9ULT6 936 aa14.26□□□□□ -0.13
SNX1-204ENST00000559061 HDAC5Q9UQL6 1122 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms