RNA–Protein interactions for RNA: ENST00000557273.5

RDH11-209, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-209ENST00000557273 CCDC85CA6NKD9 419 aa13.14□□□□□ -0.31
RDH11-209ENST00000557273 FAM155AB1AL88 458 aaPredicted RBP13.14□□□□□ -0.31
RDH11-209ENST00000557273 C6orf229H3BNL8 230 aa13.14□□□□□ -0.31
RDH11-209ENST00000557273 EGFRP00533 1210 aa13.14□□□□□ -0.31
RDH11-209ENST00000557273 MLLT1Q03111 559 aaPredicted RBP13.14□□□□□ -0.31
RDH11-209ENST00000557273 WDR43Q15061 677 aaKnown RBP eCLIP13.14□□□□□ -0.31
RDH11-209ENST00000557273 RGMBQ6NW40 437 aa13.14□□□□□ -0.31
RDH11-209ENST00000557273 MCOLN1Q9GZU1 580 aa13.14□□□□□ -0.31
RDH11-209ENST00000557273 GBA2Q9HCG7 927 aaPredicted RBP13.14□□□□□ -0.31
RDH11-209ENST00000557273 MBIPQ9NS73 344 aa13.14□□□□□ -0.31
RDH11-209ENST00000557273 LAS1LQ9Y4W2 734 aaKnown RBP13.14□□□□□ -0.31
RDH11-209ENST00000557273 PDE4DIPQ5VU43 2346 aa13.13□□□□□ -0.31
RDH11-209ENST00000557273 SLC34A2O95436 690 aa13.13□□□□□ -0.31
RDH11-209ENST00000557273 TBC1D10BQ4KMP7 808 aaPredicted RBP13.13□□□□□ -0.31
RDH11-209ENST00000557273 CCDC102AQ96A19 550 aa13.13□□□□□ -0.31
RDH11-209ENST00000557273 DCPSQ96C86 337 aaKnown RBP13.13□□□□□ -0.31
RDH11-209ENST00000557273 ZIC5Q96T25 663 aa13.13□□□□□ -0.31
RDH11-209ENST00000557273 ZC3H12CQ9C0D7 883 aaKnown RBP13.13□□□□□ -0.31
RDH11-209ENST00000557273 ADAMTS8Q9UP79 889 aa13.13□□□□□ -0.31
RDH11-209ENST00000557273 ZNF646O15015 1829 aaPredicted RBP13.12□□□□□ -0.31
RDH11-209ENST00000557273 RIMBP2O15034 1052 aa13.12□□□□□ -0.31
RDH11-209ENST00000557273 PCCAP05165 728 aaPredicted RBP13.12□□□□□ -0.31
RDH11-209ENST00000557273 ZNF280AP59817 542 aaPredicted RBP13.12□□□□□ -0.31
RDH11-209ENST00000557273 GOLGA2Q08379 1002 aa13.12□□□□□ -0.31
RDH11-209ENST00000557273 KIF4BQ2VIQ3 1234 aa13.12□□□□□ -0.31
RDH11-209ENST00000557273 C2orf69Q8N8R5 385 aa13.12□□□□□ -0.31
RDH11-209ENST00000557273 CCDC191Q8NCU4 936 aa13.12□□□□□ -0.31
RDH11-209ENST00000557273 AGBL3Q8NEM8 1001 aa13.12□□□□□ -0.31
RDH11-209ENST00000557273 KCNQ5Q9NR82 932 aa13.12□□□□□ -0.31
RDH11-209ENST00000557273 IFT57Q9NWB7 429 aa13.12□□□□□ -0.31
RDH11-209ENST00000557273 PAPPA2Q9BXP8 1791 aa13.12□□□□□ -0.31
RDH11-209ENST00000557273 DOK7Q18PE1 504 aa13.11□□□□□ -0.31
RDH11-209ENST00000557273 CCDC152Q4G0S7 254 aa13.11□□□□□ -0.31
RDH11-209ENST00000557273 RIC3Q7Z5B4 369 aa13.11□□□□□ -0.31
RDH11-209ENST00000557273 SULF1Q8IWU6 871 aa13.11□□□□□ -0.31
RDH11-209ENST00000557273 ZNF428Q96B54 188 aa13.11□□□□□ -0.31
RDH11-209ENST00000557273 GGA1Q9UJY5 639 aa13.11□□□□□ -0.31
RDH11-209ENST00000557273 ADM5C9JUS6 153 aa13.1□□□□□ -0.31
RDH11-209ENST00000557273 PDE8AO60658 829 aa13.1□□□□□ -0.31
RDH11-209ENST00000557273 UFL1O94874 794 aa13.1□□□□□ -0.31
RDH11-209ENST00000557273 SLC10A3P09131 477 aa13.1□□□□□ -0.31
RDH11-209ENST00000557273 GNAI1P63096 354 aa13.1□□□□□ -0.31
RDH11-209ENST00000557273 FKBP1BP68106 108 aa13.1□□□□□ -0.31
RDH11-209ENST00000557273 CALD1Q05682 793 aaKnown RBP13.1□□□□□ -0.31
RDH11-209ENST00000557273 DGKZQ13574 1117 aa13.1□□□□□ -0.31
RDH11-209ENST00000557273 RTL5Q5HYW3 569 aaPredicted RBP13.1□□□□□ -0.31
RDH11-209ENST00000557273 DLK2Q6UY11 383 aa13.1□□□□□ -0.31
RDH11-209ENST00000557273 REM2Q8IYK8 340 aaPredicted RBP13.1□□□□□ -0.31
RDH11-209ENST00000557273 CHMP4AQ9BY43 222 aa13.1□□□□□ -0.31
RDH11-209ENST00000557273 SEC31BQ9NQW1 1179 aa13.1□□□□□ -0.31
RDH11-209ENST00000557273 GGA3Q9NZ52 723 aa13.1□□□□□ -0.31
RDH11-209ENST00000557273 XDHP47989 1333 aa13.1□□□□□ -0.31
RDH11-209ENST00000557273 PITPNM2Q9BZ72 1349 aa13.1□□□□□ -0.31
RDH11-209ENST00000557273 RBM26Q5T8P6 1007 aaKnown RBP13.09□□□□□ -0.31
RDH11-209ENST00000557273 RSBN1LQ6PCB5 846 aaPredicted RBP13.09□□□□□ -0.31
RDH11-209ENST00000557273 GMLQ99445 158 aa13.09□□□□□ -0.31
RDH11-209ENST00000557273 PHAXQ9H814 394 aaKnown RBP13.09□□□□□ -0.31
RDH11-209ENST00000557273 CWC25Q9NXE8 425 aaPredicted RBP13.09□□□□□ -0.31
RDH11-209ENST00000557273 ANKIB1Q9P2G1 1089 aa13.09□□□□□ -0.31
RDH11-209ENST00000557273 ZNF157P51786 506 aaPredicted RBP13.08□□□□□ -0.32
RDH11-209ENST00000557273 KIF23Q02241 960 aaPredicted RBP13.08□□□□□ -0.32
RDH11-209ENST00000557273 DDX10Q13206 875 aaKnown RBP13.08□□□□□ -0.32
RDH11-209ENST00000557273 PODNQ7Z5L7 613 aa13.08□□□□□ -0.32
RDH11-209ENST00000557273 CDCA5Q96FF9 252 aa13.08□□□□□ -0.32
RDH11-209ENST00000557273 MYD88Q99836 296 aa13.08□□□□□ -0.32
RDH11-209ENST00000557273 METTL22Q9BUU2 404 aaPredicted RBP13.08□□□□□ -0.32
RDH11-209ENST00000557273 MED23Q9ULK4 1368 aa13.07□□□□□ -0.32
RDH11-209ENST00000557273 CACNA1FO60840 1977 aa13.07□□□□□ -0.32
RDH11-209ENST00000557273 SPEF2Q9C093 1822 aa13.07□□□□□ -0.32
RDH11-209ENST00000557273 ATP2B4P23634 1241 aa13.07□□□□□ -0.32
RDH11-209ENST00000557273 ANKRD18AQ8IVF6 992 aa13.07□□□□□ -0.32
RDH11-209ENST00000557273 PRKRIP1Q9H875 184 aaPredicted RBP13.07□□□□□ -0.32
RDH11-209ENST00000557273 RNF186Q9NXI6 227 aa13.07□□□□□ -0.32
RDH11-209ENST00000557273 ASTN2O75129 1339 aaPredicted RBP13.07□□□□□ -0.32
RDH11-209ENST00000557273 G3V3G9 751 aa13.06□□□□□ -0.32
RDH11-209ENST00000557273 DDX58O95786 925 aaKnown RBP13.06□□□□□ -0.32
RDH11-209ENST00000557273 USP17L8P0C7I0 530 aa13.06□□□□□ -0.32
RDH11-209ENST00000557273 MMP14P50281 582 aa13.06□□□□□ -0.32
RDH11-209ENST00000557273 SCARF1Q14162 830 aa13.06□□□□□ -0.32
RDH11-209ENST00000557273 DCAF8Q5TAQ9 597 aa13.06□□□□□ -0.32
RDH11-209ENST00000557273 ANGEL2Q5VTE6 544 aaKnown RBP13.06□□□□□ -0.32
RDH11-209ENST00000557273 CCDC30Q5VVM6 783 aa13.06□□□□□ -0.32
RDH11-209ENST00000557273 CSRNP1Q96S65 589 aa13.06□□□□□ -0.32
RDH11-209ENST00000557273 CDC5LQ99459 802 aaKnown RBP13.06□□□□□ -0.32
RDH11-209ENST00000557273 MYOZ2Q9NPC6 264 aa13.06□□□□□ -0.32
RDH11-209ENST00000557273 USP17L3A6NCW0 530 aa13.05□□□□□ -0.32
RDH11-209ENST00000557273 USP17L4A6NCW7 530 aa13.05□□□□□ -0.32
RDH11-209ENST00000557273 APAF1O14727 1248 aa13.05□□□□□ -0.32
RDH11-209ENST00000557273 CTSWP56202 376 aa13.05□□□□□ -0.32
RDH11-209ENST00000557273 USP17L1Q7RTZ2 530 aa13.05□□□□□ -0.32
RDH11-209ENST00000557273 RASAL3Q86YV0 1011 aa13.05□□□□□ -0.32
RDH11-209ENST00000557273 C8orf58Q8NAV2 365 aa13.05□□□□□ -0.32
RDH11-209ENST00000557273 ELL2O00472 640 aaPredicted RBP13.04□□□□□ -0.32
RDH11-209ENST00000557273 TRPA1O75762 1119 aa13.04□□□□□ -0.32
RDH11-209ENST00000557273 KSR2Q6VAB6 950 aa13.04□□□□□ -0.32
RDH11-209ENST00000557273 TTLL11Q8NHH1 800 aa13.04□□□□□ -0.32
RDH11-209ENST00000557273 BSDC1Q9NW68 430 aaPredicted RBP13.04□□□□□ -0.32
RDH11-209ENST00000557273 MYO3BQ8WXR4 1341 aa13.04□□□□□ -0.32
RDH11-209ENST00000557273 LAMB1P07942 1786 aa13.03□□□□□ -0.32
RDH11-209ENST00000557273 IGKV5-2P06315 115 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms