RNA–Protein interactions for RNA: ENST00000555303.1

AC004828.1-201, humanhuman

TSL 3 BASIC

Gene AC004828.1, Length 654 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004828.1-201ENST00000555303 ECE1P42892 770 aa11.54□□□□□ -0.56
AC004828.1-201ENST00000555303 ANKRD18AQ8IVF6 992 aa11.54□□□□□ -0.56
AC004828.1-201ENST00000555303 ZC3H12CQ9C0D7 883 aaKnown RBP11.54□□□□□ -0.56
AC004828.1-201ENST00000555303 SEC31BQ9NQW1 1179 aa11.54□□□□□ -0.56
AC004828.1-201ENST00000555303 ANKIB1Q9P2G1 1089 aa11.54□□□□□ -0.56
AC004828.1-201ENST00000555303 CNOT7Q9UIV1 285 aaKnown RBP11.54□□□□□ -0.56
AC004828.1-201ENST00000555303 GGA1Q9UJY5 639 aa11.54□□□□□ -0.56
AC004828.1-201ENST00000555303 NEURL1BA8MQ27 555 aa11.53□□□□□ -0.56
AC004828.1-201ENST00000555303 PSMD14O00487 310 aa11.53□□□□□ -0.56
AC004828.1-201ENST00000555303 UFL1O94874 794 aa11.53□□□□□ -0.56
AC004828.1-201ENST00000555303 SLC4A2P04920 1241 aa11.53□□□□□ -0.56
AC004828.1-201ENST00000555303 MAP2K1Q02750 393 aaPredicted RBP11.53□□□□□ -0.56
AC004828.1-201ENST00000555303 FLIIQ13045 1269 aa11.53□□□□□ -0.56
AC004828.1-201ENST00000555303 TNS4Q8IZW8 715 aa11.53□□□□□ -0.56
AC004828.1-201ENST00000555303 DBNDD1Q9H9R9 158 aa11.53□□□□□ -0.56
AC004828.1-201ENST00000555303 WDR33Q9C0J8 1336 aaKnown RBP11.53□□□□□ -0.56
AC004828.1-201ENST00000555303 ZNF646O15015 1829 aaPredicted RBP11.52□□□□□ -0.57
AC004828.1-201ENST00000555303 RIMBP2O15034 1052 aa11.52□□□□□ -0.57
AC004828.1-201ENST00000555303 CTCFP49711 727 aaPredicted RBP11.52□□□□□ -0.57
AC004828.1-201ENST00000555303 CDC37L1Q7L3B6 337 aa11.52□□□□□ -0.57
AC004828.1-201ENST00000555303 MICALL2Q8IY33 904 aa11.52□□□□□ -0.57
AC004828.1-201ENST00000555303 TRPM4Q8TD43 1214 aa11.52□□□□□ -0.57
AC004828.1-201ENST00000555303 HHIPL1Q96JK4 782 aa11.52□□□□□ -0.57
AC004828.1-201ENST00000555303 MYH16Q9H6N6 1097 aa11.52□□□□□ -0.57
AC004828.1-201ENST00000555303 PRDM10Q9NQV6 1147 aa11.52□□□□□ -0.57
AC004828.1-201ENST00000555303 WBP1LQ9NX94 342 aa11.52□□□□□ -0.57
AC004828.1-201ENST00000555303 TLL2Q9Y6L7 1015 aa11.52□□□□□ -0.57
AC004828.1-201ENST00000555303 MED23Q9ULK4 1368 aa11.52□□□□□ -0.57
AC004828.1-201ENST00000555303 A0A1B0GUL6 1792 aa11.51□□□□□ -0.57
AC004828.1-201ENST00000555303 G3V3G9 751 aa11.51□□□□□ -0.57
AC004828.1-201ENST00000555303 TRAF5O00463 557 aa11.51□□□□□ -0.57
AC004828.1-201ENST00000555303 FOXN1O15353 648 aa11.51□□□□□ -0.57
AC004828.1-201ENST00000555303 VIL1P09327 827 aaKnown RBP11.51□□□□□ -0.57
AC004828.1-201ENST00000555303 ATP2B4P23634 1241 aa11.51□□□□□ -0.57
AC004828.1-201ENST00000555303 HIRAP54198 1017 aaPredicted RBP11.51□□□□□ -0.57
AC004828.1-201ENST00000555303 FKBP5Q13451 457 aaPredicted RBP11.51□□□□□ -0.57
AC004828.1-201ENST00000555303 CWF19L2Q2TBE0 894 aaKnown RBP11.51□□□□□ -0.57
AC004828.1-201ENST00000555303 DCAF8Q5TAQ9 597 aa11.51□□□□□ -0.57
AC004828.1-201ENST00000555303 CST9Q5W186 159 aa11.51□□□□□ -0.57
AC004828.1-201ENST00000555303 TTLL11Q8NHH1 800 aa11.51□□□□□ -0.57
AC004828.1-201ENST00000555303 PLA2G12BQ9BX93 195 aa11.51□□□□□ -0.57
AC004828.1-201ENST00000555303 BSDC1Q9NW68 430 aaPredicted RBP11.51□□□□□ -0.57
AC004828.1-201ENST00000555303 H7C1W4 665 aa11.5□□□□□ -0.57
AC004828.1-201ENST00000555303 CELF2O95319 508 aaKnown RBP11.5□□□□□ -0.57
AC004828.1-201ENST00000555303 GCKRQ14397 625 aa11.5□□□□□ -0.57
AC004828.1-201ENST00000555303 DOK7Q18PE1 504 aa11.5□□□□□ -0.57
AC004828.1-201ENST00000555303 G2E3Q7L622 706 aa11.5□□□□□ -0.57
AC004828.1-201ENST00000555303 UBE3BQ7Z3V4 1068 aa11.5□□□□□ -0.57
AC004828.1-201ENST00000555303 PODNQ7Z5L7 613 aa11.5□□□□□ -0.57
AC004828.1-201ENST00000555303 AGBL3Q8NEM8 1001 aa11.5□□□□□ -0.57
AC004828.1-201ENST00000555303 LINS1Q8NG48 757 aa11.5□□□□□ -0.57
AC004828.1-201ENST00000555303 DNAAF4Q8WXU2 420 aa11.5□□□□□ -0.57
AC004828.1-201ENST00000555303 CAPNS2Q96L46 248 aa11.5□□□□□ -0.57
AC004828.1-201ENST00000555303 GLIS2Q9BZE0 524 aaPredicted RBP11.5□□□□□ -0.57
AC004828.1-201ENST00000555303 ZBTB12Q9Y330 459 aaPredicted RBP11.5□□□□□ -0.57
AC004828.1-201ENST00000555303 POLR2AP24928 1970 aaKnown RBP11.5□□□□□ -0.57
AC004828.1-201ENST00000555303 VAMP4O75379 141 aa11.49□□□□□ -0.57
AC004828.1-201ENST00000555303 MAP2K2P36507 400 aa11.49□□□□□ -0.57
AC004828.1-201ENST00000555303 IGHMBP2P38935 993 aaKnown RBP11.49□□□□□ -0.57
AC004828.1-201ENST00000555303 SAPCD2Q86UD0 394 aa11.49□□□□□ -0.57
AC004828.1-201ENST00000555303 JARID2Q92833 1246 aaPredicted RBP11.49□□□□□ -0.57
AC004828.1-201ENST00000555303 CCDC85AQ96PX6 553 aaPredicted RBP11.49□□□□□ -0.57
AC004828.1-201ENST00000555303 GREM2Q9H772 168 aa11.49□□□□□ -0.57
AC004828.1-201ENST00000555303 MMP14P50281 582 aa11.48□□□□□ -0.57
AC004828.1-201ENST00000555303 EXOSC9Q06265 439 aaKnown RBP11.48□□□□□ -0.57
AC004828.1-201ENST00000555303 FMR1Q06787 632 aaKnown RBP eCLIP11.48□□□□□ -0.57
AC004828.1-201ENST00000555303 KIF4BQ2VIQ3 1234 aa11.48□□□□□ -0.57
AC004828.1-201ENST00000555303 TBC1D10BQ4KMP7 808 aaPredicted RBP11.48□□□□□ -0.57
AC004828.1-201ENST00000555303 RSBN1LQ6PCB5 846 aaPredicted RBP11.48□□□□□ -0.57
AC004828.1-201ENST00000555303 PAXIP1Q6ZW49 1069 aaPredicted RBP11.48□□□□□ -0.57
AC004828.1-201ENST00000555303 SAMD7Q7Z3H4 446 aa11.48□□□□□ -0.57
AC004828.1-201ENST00000555303 DCPSQ96C86 337 aaKnown RBP11.48□□□□□ -0.57
AC004828.1-201ENST00000555303 GPR101Q96P66 508 aaPredicted RBP11.48□□□□□ -0.57
AC004828.1-201ENST00000555303 BEGAINQ9BUH8 593 aa11.48□□□□□ -0.57
AC004828.1-201ENST00000555303 MINPP1Q9UNW1 487 aa11.48□□□□□ -0.57
AC004828.1-201ENST00000555303 LEMD3Q9Y2U8 911 aa11.48□□□□□ -0.57
AC004828.1-201ENST00000555303 MYO3BQ8WXR4 1341 aa11.47□□□□□ -0.57
AC004828.1-201ENST00000555303 SHTN1A0MZ66 631 aa11.47□□□□□ -0.57
AC004828.1-201ENST00000555303 USP17L3A6NCW0 530 aa11.47□□□□□ -0.57
AC004828.1-201ENST00000555303 USP17L4A6NCW7 530 aa11.47□□□□□ -0.57
AC004828.1-201ENST00000555303 CA12O43570 354 aa11.47□□□□□ -0.57
AC004828.1-201ENST00000555303 CSF1RP07333 972 aa11.47□□□□□ -0.57
AC004828.1-201ENST00000555303 CCT4P50991 539 aaKnown RBP11.47□□□□□ -0.57
AC004828.1-201ENST00000555303 CASP7P55210 303 aa11.47□□□□□ -0.57
AC004828.1-201ENST00000555303 ZNF280AP59817 542 aaPredicted RBP11.47□□□□□ -0.57
AC004828.1-201ENST00000555303 CYP4F22Q6NT55 531 aa11.47□□□□□ -0.57
AC004828.1-201ENST00000555303 USP17L1Q7RTZ2 530 aa11.47□□□□□ -0.57
AC004828.1-201ENST00000555303 KRT26Q7Z3Y9 468 aa11.47□□□□□ -0.57
AC004828.1-201ENST00000555303 ANKRD2Q9GZV1 360 aa11.47□□□□□ -0.57
AC004828.1-201ENST00000555303 KCNQ5Q9NR82 932 aa11.47□□□□□ -0.57
AC004828.1-201ENST00000555303 PITPNM2Q9BZ72 1349 aa11.46□□□□□ -0.57
AC004828.1-201ENST00000555303 ITGA6P23229 1130 aa11.46□□□□□ -0.57
AC004828.1-201ENST00000555303 SULF1Q8IWU6 871 aa11.46□□□□□ -0.57
AC004828.1-201ENST00000555303 MPHOSPH8Q99549 860 aa11.46□□□□□ -0.57
AC004828.1-201ENST00000555303 ECM29Q5VYK3 1845 aa11.46□□□□□ -0.58
AC004828.1-201ENST00000555303 PAPPA2Q9BXP8 1791 aa11.46□□□□□ -0.58
AC004828.1-201ENST00000555303 EGFRP00533 1210 aa11.45□□□□□ -0.58
AC004828.1-201ENST00000555303 USP17L8P0C7I0 530 aa11.45□□□□□ -0.58
AC004828.1-201ENST00000555303 HSPA8P11142 646 aaKnown RBP11.45□□□□□ -0.58
AC004828.1-201ENST00000555303 BRPF1P55201 1214 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms