RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 SCNN1AP37088 669 aa8.91□□□□□ -0.98
SCFD1-212ENST00000554486 TLR1Q15399 786 aa8.91□□□□□ -0.98
SCFD1-212ENST00000554486 NBPF1Q3BBV0 1214 aa8.91□□□□□ -0.98
SCFD1-212ENST00000554486 GNASQ5JWF2 1037 aa8.91□□□□□ -0.98
SCFD1-212ENST00000554486 TMEM214Q6NUQ4 689 aaKnown RBP8.91□□□□□ -0.98
SCFD1-212ENST00000554486 NBPF10Q6P3W6 841 aaKnown RBP8.91□□□□□ -0.98
SCFD1-212ENST00000554486 ANKLE2Q86XL3 938 aa8.91□□□□□ -0.98
SCFD1-212ENST00000554486 NBPF15Q8N660 670 aa8.91□□□□□ -0.98
SCFD1-212ENST00000554486 STK17AQ9UEE5 414 aa8.91□□□□□ -0.98
SCFD1-212ENST00000554486 RBM19Q9Y4C8 960 aaKnown RBP8.91□□□□□ -0.98
SCFD1-212ENST00000554486 ALKQ9UM73 1620 aa8.91□□□□□ -0.98
SCFD1-212ENST00000554486 ADAMTS13Q76LX8 1427 aa8.9□□□□□ -0.98
SCFD1-212ENST00000554486 H7C1W4 665 aa8.9□□□□□ -0.98
SCFD1-212ENST00000554486 ZSCAN1Q8NBB4 408 aa8.9□□□□□ -0.98
SCFD1-212ENST00000554486 C14orf93Q9H972 538 aaKnown RBP8.9□□□□□ -0.98
SCFD1-212ENST00000554486 TIMMDC1Q9NPL8 285 aa8.9□□□□□ -0.98
SCFD1-212ENST00000554486 STRCQ7RTU9 1775 aa8.9□□□□□ -0.98
SCFD1-212ENST00000554486 LAMC1P11047 1609 aa8.9□□□□□ -0.99
SCFD1-212ENST00000554486 ASXL1Q8IXJ9 1541 aa8.9□□□□□ -0.99
SCFD1-212ENST00000554486 MED14O60244 1454 aa8.89□□□□□ -0.99
SCFD1-212ENST00000554486 ATAD2Q6PL18 1390 aa8.89□□□□□ -0.99
SCFD1-212ENST00000554486 PDIA4P13667 645 aaKnown RBP8.89□□□□□ -0.99
SCFD1-212ENST00000554486 FOXR1Q6PIV2 292 aa8.89□□□□□ -0.99
SCFD1-212ENST00000554486 RIPOR1Q6ZS17 1223 aa8.89□□□□□ -0.99
SCFD1-212ENST00000554486 SLC9A9Q8IVB4 645 aa8.89□□□□□ -0.99
SCFD1-212ENST00000554486 ZDHHC1Q8WTX9 485 aa8.89□□□□□ -0.99
SCFD1-212ENST00000554486 GAS2L1Q99501 681 aaPredicted RBP8.89□□□□□ -0.99
SCFD1-212ENST00000554486 CXXC1Q9P0U4 656 aaPredicted RBP8.89□□□□□ -0.99
SCFD1-212ENST00000554486 ADGRB1O14514 1584 aa8.89□□□□□ -0.99
SCFD1-212ENST00000554486 GPRASP1Q5JY77 1395 aa8.88□□□□□ -0.99
SCFD1-212ENST00000554486 ATP2B4P23634 1241 aa8.88□□□□□ -0.99
SCFD1-212ENST00000554486 POTEAQ6S8J7 498 aa8.88□□□□□ -0.99
SCFD1-212ENST00000554486 CAPN12Q6ZSI9 719 aa8.88□□□□□ -0.99
SCFD1-212ENST00000554486 GPR161Q8N6U8 529 aaKnown RBP8.88□□□□□ -0.99
SCFD1-212ENST00000554486 SCG3Q8WXD2 468 aaKnown RBP8.88□□□□□ -0.99
SCFD1-212ENST00000554486 NPHP4O75161 1426 aaPredicted RBP8.88□□□□□ -0.99
SCFD1-212ENST00000554486 ROCK2O75116 1388 aaKnown RBP8.87□□□□□ -0.99
SCFD1-212ENST00000554486 IGFBP4P22692 258 aa8.87□□□□□ -0.99
SCFD1-212ENST00000554486 FKBP5Q13451 457 aaPredicted RBP8.87□□□□□ -0.99
SCFD1-212ENST00000554486 SH3PXD2AQ5TCZ1 1133 aa8.87□□□□□ -0.99
SCFD1-212ENST00000554486 TRIM22Q8IYM9 498 aa8.87□□□□□ -0.99
SCFD1-212ENST00000554486 SLC26A8Q96RN1 970 aa8.87□□□□□ -0.99
SCFD1-212ENST00000554486 COL25A1Q9BXS0 654 aaPredicted RBP8.87□□□□□ -0.99
SCFD1-212ENST00000554486 METP08581 1390 aa8.86□□□□□ -0.99
SCFD1-212ENST00000554486 DIP2AQ14689 1571 aa8.86□□□□□ -0.99
SCFD1-212ENST00000554486 F11P03951 625 aa8.86□□□□□ -0.99
SCFD1-212ENST00000554486 PDE4CQ08493 712 aa8.86□□□□□ -0.99
SCFD1-212ENST00000554486 TMEM132EQ6IEE7 984 aa8.86□□□□□ -0.99
SCFD1-212ENST00000554486 RHBDD1Q8TEB9 315 aa8.86□□□□□ -0.99
SCFD1-212ENST00000554486 CNTNAP3BQ96NU0 1288 aa8.86□□□□□ -0.99
SCFD1-212ENST00000554486 CNTNAP3Q9BZ76 1288 aa8.86□□□□□ -0.99
SCFD1-212ENST00000554486 TBX22Q9Y458 520 aa8.86□□□□□ -0.99
SCFD1-212ENST00000554486 BRD1O95696 1058 aa8.85□□□□□ -0.99
SCFD1-212ENST00000554486 C4orf17Q53FE4 359 aa8.85□□□□□ -0.99
SCFD1-212ENST00000554486 C1orf216Q8TAB5 229 aa8.85□□□□□ -0.99
SCFD1-212ENST00000554486 C2orf49Q9BVC5 232 aaPredicted RBP8.85□□□□□ -0.99
SCFD1-212ENST00000554486 CARD11Q9BXL7 1154 aa8.85□□□□□ -0.99
SCFD1-212ENST00000554486 PTPRUQ92729 1446 aa8.85□□□□□ -0.99
SCFD1-212ENST00000554486 A0A1B0GTH6 734 aa8.84□□□□□ -0.99
SCFD1-212ENST00000554486 EML1O00423 815 aa8.84□□□□□ -0.99
SCFD1-212ENST00000554486 PHKA2P46019 1235 aa8.84□□□□□ -0.99
SCFD1-212ENST00000554486 TEAD4Q15561 434 aa8.84□□□□□ -0.99
SCFD1-212ENST00000554486 STAG2Q8N3U4 1231 aa8.84□□□□□ -0.99
SCFD1-212ENST00000554486 YTHDC2Q9H6S0 1430 aaKnown RBP8.84□□□□□ -0.99
SCFD1-212ENST00000554486 PARP3Q9Y6F1 533 aa8.84□□□□□ -0.99
SCFD1-212ENST00000554486 CHD2O14647 1828 aaKnown RBP8.84□□□□□ -0.99
SCFD1-212ENST00000554486 LRPPRCP42704 1394 aaKnown RBP8.84□□□□□ -0.99
SCFD1-212ENST00000554486 USP47Q96K76 1375 aa8.84□□□□□ -0.99
SCFD1-212ENST00000554486 PPP1R12BO60237 982 aaPredicted RBP8.83□□□□□ -1
SCFD1-212ENST00000554486 DBN1Q16643 649 aa8.83□□□□□ -1
SCFD1-212ENST00000554486 ZNF837Q96EG3 531 aaPredicted RBP8.83□□□□□ -1
SCFD1-212ENST00000554486 TRERF1Q96PN7 1200 aa8.83□□□□□ -1
SCFD1-212ENST00000554486 PIK3R4Q99570 1358 aa8.83□□□□□ -1
SCFD1-212ENST00000554486 KNDC1Q76NI1 1749 aa8.83□□□□□ -1
SCFD1-212ENST00000554486 XRN1Q8IZH2 1706 aaKnown RBP8.83□□□□□ -1
SCFD1-212ENST00000554486 ARHGEF28Q8N1W1 1705 aaKnown RBP8.83□□□□□ -1
SCFD1-212ENST00000554486 HSPA5P11021 654 aaKnown RBP8.82□□□□□ -1
SCFD1-212ENST00000554486 NOS2P35228 1153 aa8.82□□□□□ -1
SCFD1-212ENST00000554486 PGBD3Q8N328 593 aa8.82□□□□□ -1
SCFD1-212ENST00000554486 C7orf43Q8WVR3 580 aa8.82□□□□□ -1
SCFD1-212ENST00000554486 NIFKQ9BYG3 293 aaKnown RBP8.82□□□□□ -1
SCFD1-212ENST00000554486 CUEDC1Q9NWM3 386 aaPredicted RBP8.82□□□□□ -1
SCFD1-212ENST00000554486 STK26Q9P289 416 aa8.82□□□□□ -1
SCFD1-212ENST00000554486 TRAK1Q9UPV9 953 aa8.82□□□□□ -1
SCFD1-212ENST00000554486 ABCC11Q96J66 1382 aa8.82□□□□□ -1
SCFD1-212ENST00000554486 TECPR2O15040 1411 aa8.81□□□□□ -1
SCFD1-212ENST00000554486 DLC1Q96QB1 1528 aa8.81□□□□□ -1
SCFD1-212ENST00000554486 FOXO3O43524 673 aa8.81□□□□□ -1
SCFD1-212ENST00000554486 HIRAP54198 1017 aaPredicted RBP8.81□□□□□ -1
SCFD1-212ENST00000554486 PSMA6P60900 246 aaKnown RBP8.81□□□□□ -1
SCFD1-212ENST00000554486 KLRG1Q96E93 195 aa8.81□□□□□ -1
SCFD1-212ENST00000554486 NUCKS1Q9H1E3 243 aaKnown RBP8.81□□□□□ -1
SCFD1-212ENST00000554486 CABP1Q9NZU7 370 aa8.81□□□□□ -1
SCFD1-212ENST00000554486 SEPT3Q9UH03 358 aa8.81□□□□□ -1
SCFD1-212ENST00000554486 STRCP1A6NGW2 1772 aa8.81□□□□□ -1
SCFD1-212ENST00000554486 CPS1P31327 1500 aa8.8□□□□□ -1
SCFD1-212ENST00000554486 ST20-MTHFSA0A0A6YYL1 179 aa8.8□□□□□ -1
SCFD1-212ENST00000554486 TXLNAP40222 546 aa8.8□□□□□ -1
SCFD1-212ENST00000554486 LBRQ14739 615 aaKnown RBP8.8□□□□□ -1
SCFD1-212ENST00000554486 MKNK1Q9BUB5 465 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms