RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 TOGARAM1Q9Y4F4 1720 aa10.71□□□□□ -0.69
AL049839.2-201ENST00000553947 MAP4K1Q92918 833 aa10.71□□□□□ -0.69
AL049839.2-201ENST00000553947 ZBTB9Q96C00 473 aa10.71□□□□□ -0.69
AL049839.2-201ENST00000553947 CCDC9Q9Y3X0 531 aaKnown RBP10.71□□□□□ -0.69
AL049839.2-201ENST00000553947 RPAP1Q9BWH6 1393 aaPredicted RBP10.71□□□□□ -0.7
AL049839.2-201ENST00000553947 TNS2Q63HR2 1409 aa10.71□□□□□ -0.7
AL049839.2-201ENST00000553947 CREB3L3Q68CJ9 461 aa10.71□□□□□ -0.7
AL049839.2-201ENST00000553947 ZSWIM6Q9HCJ5 1215 aa10.71□□□□□ -0.7
AL049839.2-201ENST00000553947 SNRKQ9NRH2 765 aa10.71□□□□□ -0.7
AL049839.2-201ENST00000553947 CWC25Q9NXE8 425 aaPredicted RBP10.71□□□□□ -0.7
AL049839.2-201ENST00000553947 LIMCH1Q9UPQ0 1083 aa10.71□□□□□ -0.7
AL049839.2-201ENST00000553947 TJP1Q07157 1748 aa10.71□□□□□ -0.7
AL049839.2-201ENST00000553947 RIOK3O14730 519 aaKnown RBP10.7□□□□□ -0.7
AL049839.2-201ENST00000553947 ATP5JP18859 108 aa10.7□□□□□ -0.7
AL049839.2-201ENST00000553947 GABPB1Q06547 395 aaPredicted RBP10.7□□□□□ -0.7
AL049839.2-201ENST00000553947 ATG9AQ7Z3C6 839 aa10.7□□□□□ -0.7
AL049839.2-201ENST00000553947 ASAP1Q9ULH1 1129 aa10.7□□□□□ -0.7
AL049839.2-201ENST00000553947 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.7□□□□□ -0.7
AL049839.2-201ENST00000553947 ZNF594Q96JF6 807 aaPredicted RBP10.7□□□□□ -0.7
AL049839.2-201ENST00000553947 TMEM63CQ9P1W3 806 aa10.7□□□□□ -0.7
AL049839.2-201ENST00000553947 MED23Q9ULK4 1368 aa10.7□□□□□ -0.7
AL049839.2-201ENST00000553947 HIP1O00291 1037 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 SLC27A2O14975 620 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 ST3GAL1Q11201 340 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 TPRNQ4KMQ1 711 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 TSPY26PQ9H489 355 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 PDRG1Q9NUG6 133 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 BTG4Q9NY30 223 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 ZNF330Q9Y3S2 320 aaPredicted RBP10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 NHSL1Q5SYE7 1610 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 PIGBQ92521 554 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 SEC62Q99442 399 aaKnown RBP10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 GDPD2Q9HCC8 539 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 TMOD3Q9NYL9 352 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 LRRC24Q50LG9 513 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 VPS53Q5VIR6 699 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 DNAJC10Q8IXB1 793 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 RGS22Q8NE09 1264 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 TCEANC2Q96MN5 208 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 TM6SF1Q9BZW5 370 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 CALCOCO1Q9P1Z2 691 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 CYP46A1Q9Y6A2 500 aa10.69□□□□□ -0.7
AL049839.2-201ENST00000553947 TAF5LO75529 589 aa10.68□□□□□ -0.7
AL049839.2-201ENST00000553947 TIMM10P62072 90 aa10.68□□□□□ -0.7
AL049839.2-201ENST00000553947 SLFNL1Q499Z3 407 aa10.68□□□□□ -0.7
AL049839.2-201ENST00000553947 CCDC129Q6ZRS4 1044 aa10.68□□□□□ -0.7
AL049839.2-201ENST00000553947 CCDC83Q8IWF9 413 aa10.68□□□□□ -0.7
AL049839.2-201ENST00000553947 USP25Q9UHP3 1055 aa10.68□□□□□ -0.7
AL049839.2-201ENST00000553947 ME3Q16798 604 aa10.68□□□□□ -0.7
AL049839.2-201ENST00000553947 DDX46Q7L014 1031 aaKnown RBP10.68□□□□□ -0.7
AL049839.2-201ENST00000553947 CCDC191Q8NCU4 936 aa10.68□□□□□ -0.7
AL049839.2-201ENST00000553947 ZKSCAN1P17029 563 aaPredicted RBP10.67□□□□□ -0.7
AL049839.2-201ENST00000553947 PUS3Q9BZE2 481 aaKnown RBP10.67□□□□□ -0.7
AL049839.2-201ENST00000553947 TPCN1Q9ULQ1 816 aa10.67□□□□□ -0.7
AL049839.2-201ENST00000553947 ZNF609O15014 1411 aa10.67□□□□□ -0.7
AL049839.2-201ENST00000553947 JCADQ9P266 1359 aa10.67□□□□□ -0.7
AL049839.2-201ENST00000553947 SYT1P21579 422 aa10.67□□□□□ -0.7
AL049839.2-201ENST00000553947 NECAB1Q8N987 351 aa10.67□□□□□ -0.7
AL049839.2-201ENST00000553947 NEUROD6Q96NK8 337 aa10.67□□□□□ -0.7
AL049839.2-201ENST00000553947 HAUS7Q99871 368 aa10.67□□□□□ -0.7
AL049839.2-201ENST00000553947 ISCA1Q9BUE6 129 aa10.67□□□□□ -0.7
AL049839.2-201ENST00000553947 ATG3Q9NT62 314 aa10.67□□□□□ -0.7
AL049839.2-201ENST00000553947 WDR33Q9C0J8 1336 aaKnown RBP10.66□□□□□ -0.7
AL049839.2-201ENST00000553947 GADD45BO75293 160 aaPredicted RBP10.66□□□□□ -0.7
AL049839.2-201ENST00000553947 SLFN14P0C7P3 912 aa10.66□□□□□ -0.7
AL049839.2-201ENST00000553947 CCDC85AQ96PX6 553 aaPredicted RBP10.66□□□□□ -0.7
AL049839.2-201ENST00000553947 SMC3Q9UQE7 1217 aa10.66□□□□□ -0.7
AL049839.2-201ENST00000553947 TCIRG1Q13488 830 aa10.66□□□□□ -0.7
AL049839.2-201ENST00000553947 DHX37Q8IY37 1157 aaKnown RBP10.66□□□□□ -0.7
AL049839.2-201ENST00000553947 SYNE4Q8N205 404 aa10.66□□□□□ -0.7
AL049839.2-201ENST00000553947 SLC4A9Q96Q91 983 aa10.66□□□□□ -0.7
AL049839.2-201ENST00000553947 EYA2O00167 538 aa10.65□□□□□ -0.7
AL049839.2-201ENST00000553947 STX6O43752 255 aa10.65□□□□□ -0.7
AL049839.2-201ENST00000553947 APPP05067 770 aa10.65□□□□□ -0.7
AL049839.2-201ENST00000553947 ZSCAN22P10073 491 aaPredicted RBP10.65□□□□□ -0.7
AL049839.2-201ENST00000553947 GJB2P29033 226 aa10.65□□□□□ -0.7
AL049839.2-201ENST00000553947 ANKRD7Q92527 254 aa10.65□□□□□ -0.7
AL049839.2-201ENST00000553947 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.65□□□□□ -0.7
AL049839.2-201ENST00000553947 SLC20A2Q08357 652 aa10.65□□□□□ -0.7
AL049839.2-201ENST00000553947 USP48Q86UV5 1035 aa10.65□□□□□ -0.7
AL049839.2-201ENST00000553947 SYAP1Q96A49 352 aaPredicted RBP10.65□□□□□ -0.7
AL049839.2-201ENST00000553947 CHMP4CQ96CF2 233 aa10.65□□□□□ -0.7
AL049839.2-201ENST00000553947 FAM89AQ96GI7 184 aa10.65□□□□□ -0.7
AL049839.2-201ENST00000553947 TCHHQ07283 1943 aa10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 GOLIM4O00461 696 aa10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 ADCY5O95622 1261 aa10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 MBD3O95983 291 aa10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 IL15P40933 162 aaPredicted RBP10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 TERF2Q15554 542 aa10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 USPL1Q5W0Q7 1092 aa10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 CNPY2Q9Y2B0 182 aa10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 RPS6KB1P23443 525 aa10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 TOB2Q14106 344 aaPredicted RBP10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 HLFQ16534 295 aa10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 BLOC1S2Q6QNY1 142 aa10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 KBTBD3Q8NAB2 608 aa10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 ZSCAN31Q96LW9 406 aaPredicted RBP10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 A0A1B0GUL7 405 aa10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 CAPN2P17655 700 aa10.64□□□□□ -0.71
AL049839.2-201ENST00000553947 RNF20Q5VTR2 975 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms