RNA–Protein interactions for RNA: ENST00000553865.1

CCNK-203, Transcript of cyclin K, humanhuman

TSL 1 (best)

Gene CCNK, Length 5,627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-203ENST00000553865 ZCRB1Q8TBF4 217 aaKnown RBP10.49□□□□□ -0.73
CCNK-203ENST00000553865 DCAF5Q96JK2 942 aa10.49□□□□□ -0.73
CCNK-203ENST00000553865 ZSCAN16Q9H4T2 348 aaPredicted RBP10.49□□□□□ -0.73
CCNK-203ENST00000553865 SPINK5Q9NQ38 1064 aaPredicted RBP10.49□□□□□ -0.73
CCNK-203ENST00000553865 CHPF2Q9P2E5 772 aa10.49□□□□□ -0.73
CCNK-203ENST00000553865 SEC63Q9UGP8 760 aaKnown RBP10.49□□□□□ -0.73
CCNK-203ENST00000553865 MPHOSPH10O00566 681 aaKnown RBP10.49□□□□□ -0.73
CCNK-203ENST00000553865 ZSCAN22P10073 491 aaPredicted RBP10.49□□□□□ -0.73
CCNK-203ENST00000553865 TNNT1P13805 278 aa10.49□□□□□ -0.73
CCNK-203ENST00000553865 ZSCAN23Q3MJ62 389 aa10.49□□□□□ -0.73
CCNK-203ENST00000553865 SLC12A7Q9Y666 1083 aa10.49□□□□□ -0.73
CCNK-203ENST00000553865 TRIM21P19474 475 aaKnown RBP10.49□□□□□ -0.73
CCNK-203ENST00000553865 LRSAM1Q6UWE0 723 aa10.49□□□□□ -0.73
CCNK-203ENST00000553865 ABCF2Q9UG63 623 aa10.49□□□□□ -0.73
CCNK-203ENST00000553865 TRMT112Q9UI30 125 aaKnown RBP10.49□□□□□ -0.73
CCNK-203ENST00000553865 TTC41PQ6P2S7 1318 aa10.49□□□□□ -0.73
CCNK-203ENST00000553865 PIK3C2BO00750 1634 aa10.49□□□□□ -0.73
CCNK-203ENST00000553865 GOLGA8BA8MQT2 603 aa10.49□□□□□ -0.73
CCNK-203ENST00000553865 KSR2Q6VAB6 950 aa10.49□□□□□ -0.73
CCNK-203ENST00000553865 ANKRD13DQ6ZTN6 518 aa10.49□□□□□ -0.73
CCNK-203ENST00000553865 KDM2BQ8NHM5 1336 aa10.48□□□□□ -0.73
CCNK-203ENST00000553865 GSTTP1A0A1W2PQM5 241 aa10.48□□□□□ -0.73
CCNK-203ENST00000553865 SSRP1Q08945 709 aaKnown RBP10.48□□□□□ -0.73
CCNK-203ENST00000553865 STX1AQ16623 288 aa10.48□□□□□ -0.73
CCNK-203ENST00000553865 MTHFSDQ2M296 383 aaKnown RBP10.48□□□□□ -0.73
CCNK-203ENST00000553865 TSHZ3Q63HK5 1081 aa10.48□□□□□ -0.73
CCNK-203ENST00000553865 GOLIM4O00461 696 aa10.48□□□□□ -0.73
CCNK-203ENST00000553865 RICTORQ6R327 1708 aa10.48□□□□□ -0.73
CCNK-203ENST00000553865 ADGRL3Q9HAR2 1447 aa10.48□□□□□ -0.73
CCNK-203ENST00000553865 CLIP2Q9UDT6 1046 aa10.48□□□□□ -0.73
CCNK-203ENST00000553865 USP25Q9UHP3 1055 aa10.48□□□□□ -0.73
CCNK-203ENST00000553865 TNNQ9UQP3 1299 aa10.48□□□□□ -0.73
CCNK-203ENST00000553865 BCORL1Q5H9F3 1711 aa10.48□□□□□ -0.73
CCNK-203ENST00000553865 IL2RBP14784 551 aa10.48□□□□□ -0.73
CCNK-203ENST00000553865 UBE3BQ7Z3V4 1068 aa10.48□□□□□ -0.73
CCNK-203ENST00000553865 RAB34Q9BZG1 259 aa10.48□□□□□ -0.73
CCNK-203ENST00000553865 ROBO2Q9HCK4 1378 aa10.48□□□□□ -0.73
CCNK-203ENST00000553865 URI1O94763 535 aaPredicted RBP10.48□□□□□ -0.73
CCNK-203ENST00000553865 SSR1P43307 286 aaKnown RBP10.48□□□□□ -0.73
CCNK-203ENST00000553865 KIF4BQ2VIQ3 1234 aa10.48□□□□□ -0.73
CCNK-203ENST00000553865 GOLGA8AA7E2F4 631 aa10.47□□□□□ -0.73
CCNK-203ENST00000553865 FGFR1OPO95684 399 aaKnown RBP10.47□□□□□ -0.73
CCNK-203ENST00000553865 PAFAH1B1P43034 410 aa10.47□□□□□ -0.73
CCNK-203ENST00000553865 GSDMDP57764 484 aa10.47□□□□□ -0.73
CCNK-203ENST00000553865 IRX3P78415 501 aaPredicted RBP10.47□□□□□ -0.73
CCNK-203ENST00000553865 GRIPAP1Q4V328 841 aa10.47□□□□□ -0.73
CCNK-203ENST00000553865 IQCA1Q86XH1 822 aa10.47□□□□□ -0.73
CCNK-203ENST00000553865 SLF2Q8IX21 1173 aa10.47□□□□□ -0.73
CCNK-203ENST00000553865 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.47□□□□□ -0.73
CCNK-203ENST00000553865 V9GYY5 206 aaPredicted RBP10.47□□□□□ -0.73
CCNK-203ENST00000553865 GRM8O00222 908 aa10.47□□□□□ -0.73
CCNK-203ENST00000553865 KIF20AO95235 890 aa10.47□□□□□ -0.73
CCNK-203ENST00000553865 SPECC1Q5M775 1068 aa10.47□□□□□ -0.73
CCNK-203ENST00000553865 HOOK3Q86VS8 718 aa10.47□□□□□ -0.73
CCNK-203ENST00000553865 TSPYL6Q8N831 410 aa10.47□□□□□ -0.73
CCNK-203ENST00000553865 FSIP1Q8NA03 581 aa10.47□□□□□ -0.73
CCNK-203ENST00000553865 CTCFLQ8NI51 663 aaPredicted RBP10.47□□□□□ -0.73
CCNK-203ENST00000553865 FBF1Q8TES7 1133 aa10.47□□□□□ -0.73
CCNK-203ENST00000553865 ZFYP08048 801 aaPredicted RBP10.47□□□□□ -0.73
CCNK-203ENST00000553865 RAB3GAP1Q15042 981 aa10.47□□□□□ -0.73
CCNK-203ENST00000553865 TSG101Q99816 390 aa10.47□□□□□ -0.73
CCNK-203ENST00000553865 USP5P45974 858 aa10.47□□□□□ -0.73
CCNK-203ENST00000553865 NCOA7Q8NI08 942 aa10.47□□□□□ -0.73
CCNK-203ENST00000553865 EYA1Q99502 592 aa10.47□□□□□ -0.73
CCNK-203ENST00000553865 HSPA4P34932 840 aa10.47□□□□□ -0.73
CCNK-203ENST00000553865 ZBTB3Q9H5J0 574 aa10.47□□□□□ -0.73
CCNK-203ENST00000553865 IFIT3O14879 490 aaKnown RBP10.46□□□□□ -0.73
CCNK-203ENST00000553865 FKBP15Q5T1M5 1219 aa10.46□□□□□ -0.73
CCNK-203ENST00000553865 PLEKHM2Q8IWE5 1019 aa10.46□□□□□ -0.73
CCNK-203ENST00000553865 WDR66Q8TBY9 1149 aa10.46□□□□□ -0.73
CCNK-203ENST00000553865 GDPD2Q9HCC8 539 aa10.46□□□□□ -0.73
CCNK-203ENST00000553865 ZHX1Q9UKY1 873 aaPredicted RBP10.46□□□□□ -0.73
CCNK-203ENST00000553865 MINDY4BA8MYZ0 360 aa10.46□□□□□ -0.73
CCNK-203ENST00000553865 ZBTB7BO15156 539 aaPredicted RBP10.46□□□□□ -0.73
CCNK-203ENST00000553865 ZPR1O75312 459 aa10.46□□□□□ -0.73
CCNK-203ENST00000553865 PHACTR3Q96KR7 559 aa10.46□□□□□ -0.73
CCNK-203ENST00000553865 TAOK3Q9H2K8 898 aa10.46□□□□□ -0.73
CCNK-203ENST00000553865 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.46□□□□□ -0.731e-7■□□□□ 9.3
CCNK-203ENST00000553865 LMTK3Q96Q04 1460 aa10.46□□□□□ -0.74
CCNK-203ENST00000553865 TECPR2O15040 1411 aa10.46□□□□□ -0.74
CCNK-203ENST00000553865 ADCY5O95622 1261 aa10.46□□□□□ -0.74
CCNK-203ENST00000553865 POLR3DP05423 398 aaPredicted RBP10.46□□□□□ -0.74
CCNK-203ENST00000553865 UQCRFS1P1P0C7P4 283 aa10.46□□□□□ -0.74
CCNK-203ENST00000553865 CCT2P78371 535 aaKnown RBP10.46□□□□□ -0.74
CCNK-203ENST00000553865 CTR9Q6PD62 1173 aa10.46□□□□□ -0.74
CCNK-203ENST00000553865 CKAP2LQ8IYA6 745 aa10.46□□□□□ -0.74
CCNK-203ENST00000553865 NAA15Q9BXJ9 866 aaKnown RBP10.46□□□□□ -0.74
CCNK-203ENST00000553865 GOPCQ9HD26 462 aa10.46□□□□□ -0.74
CCNK-203ENST00000553865 GUCY1B3Q02153 619 aa10.46□□□□□ -0.74
CCNK-203ENST00000553865 MKNK2Q9HBH9 465 aa10.46□□□□□ -0.74
CCNK-203ENST00000553865 ZRANB1Q9UGI0 708 aa10.46□□□□□ -0.74
CCNK-203ENST00000553865 USP16Q9Y5T5 823 aa10.46□□□□□ -0.74
CCNK-203ENST00000553865 TOP1P11387 765 aaKnown RBP10.45□□□□□ -0.74
CCNK-203ENST00000553865 FAM114A1Q8IWE2 563 aa10.45□□□□□ -0.74
CCNK-203ENST00000553865 NCOA3Q9Y6Q9 1424 aa10.45□□□□□ -0.74
CCNK-203ENST00000553865 ATP5J2-PTCD1G3V325 749 aa10.45□□□□□ -0.74
CCNK-203ENST00000553865 LMAN1P49257 510 aa10.45□□□□□ -0.74
CCNK-203ENST00000553865 LDHAL6AQ6ZMR3 332 aa10.45□□□□□ -0.74
CCNK-203ENST00000553865 VPS36Q86VN1 386 aa10.45□□□□□ -0.74
CCNK-203ENST00000553865 LINS1Q8NG48 757 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms