RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 SEC31BQ9NQW1 1179 aa13.12□□□□□ -0.31
PFDN5-216ENST00000552341 RTCBQ9Y3I0 505 aaKnown RBP13.12□□□□□ -0.31
PFDN5-216ENST00000552341 MCCP23508 829 aa13.12□□□□□ -0.31
PFDN5-216ENST00000552341 METTL24Q5JXM2 366 aa13.12□□□□□ -0.31
PFDN5-216ENST00000552341 KBTBD3Q8NAB2 608 aa13.12□□□□□ -0.31
PFDN5-216ENST00000552341 DNAJC2Q99543 621 aaKnown RBP13.12□□□□□ -0.31
PFDN5-216ENST00000552341 CNNM1Q9NRU3 951 aa13.12□□□□□ -0.31
PFDN5-216ENST00000552341 AKAP11Q9UKA4 1901 aa13.11□□□□□ -0.31
PFDN5-216ENST00000552341 UBR3Q6ZT12 1888 aa13.11□□□□□ -0.31
PFDN5-216ENST00000552341 ARAP2Q8WZ64 1704 aa13.11□□□□□ -0.31
PFDN5-216ENST00000552341 PDE8BO95263 885 aa13.11□□□□□ -0.31
PFDN5-216ENST00000552341 CHGBP05060 677 aa13.11□□□□□ -0.31
PFDN5-216ENST00000552341 ERFEQ4G0M1 354 aa13.11□□□□□ -0.31
PFDN5-216ENST00000552341 TICAM2Q86XR7 235 aa13.11□□□□□ -0.31
PFDN5-216ENST00000552341 RASEFQ8IZ41 740 aa13.11□□□□□ -0.31
PFDN5-216ENST00000552341 KCNB2Q92953 911 aa13.11□□□□□ -0.31
PFDN5-216ENST00000552341 CCDC171Q6TFL3 1326 aa13.11□□□□□ -0.31
PFDN5-216ENST00000552341 HSP90B1P14625 803 aaKnown RBP13.11□□□□□ -0.31
PFDN5-216ENST00000552341 NECTIN1Q15223 517 aa13.11□□□□□ -0.31
PFDN5-216ENST00000552341 ATP2B3Q16720 1220 aa13.11□□□□□ -0.31
PFDN5-216ENST00000552341 CCDC152Q4G0S7 254 aa13.11□□□□□ -0.31
PFDN5-216ENST00000552341 SLC10A5Q5PT55 438 aa13.11□□□□□ -0.31
PFDN5-216ENST00000552341 KIAA1211Q6ZU35 1233 aa13.11□□□□□ -0.31
PFDN5-216ENST00000552341 C3orf67Q6ZVT6 689 aa13.11□□□□□ -0.31
PFDN5-216ENST00000552341 DDX46Q7L014 1031 aaKnown RBP13.11□□□□□ -0.31
PFDN5-216ENST00000552341 MAP4K1Q92918 833 aa13.11□□□□□ -0.31
PFDN5-216ENST00000552341 PAG1Q9NWQ8 432 aa13.11□□□□□ -0.31
PFDN5-216ENST00000552341 ABCC12Q96J65 1359 aa13.1□□□□□ -0.31
PFDN5-216ENST00000552341 IFIT1P09914 478 aaKnown RBP13.1□□□□□ -0.31
PFDN5-216ENST00000552341 FGFR2P21802 821 aa13.1□□□□□ -0.31
PFDN5-216ENST00000552341 ZNF589Q86UQ0 364 aaPredicted RBP13.1□□□□□ -0.31
PFDN5-216ENST00000552341 SNX14Q9Y5W7 946 aa13.1□□□□□ -0.31
PFDN5-216ENST00000552341 GOLIM4O00461 696 aa13.09□□□□□ -0.31
PFDN5-216ENST00000552341 ST18O60284 1047 aa13.09□□□□□ -0.31
PFDN5-216ENST00000552341 NEK4P51957 841 aa13.09□□□□□ -0.31
PFDN5-216ENST00000552341 RBM6P78332 1123 aaKnown RBP13.09□□□□□ -0.31
PFDN5-216ENST00000552341 SCARF1Q14162 830 aa13.09□□□□□ -0.31
PFDN5-216ENST00000552341 SF3B3Q15393 1217 aaKnown RBP13.09□□□□□ -0.31
PFDN5-216ENST00000552341 BICDL1Q6ZP65 573 aa13.09□□□□□ -0.31
PFDN5-216ENST00000552341 TAF1P21675 1872 aa13.09□□□□□ -0.31
PFDN5-216ENST00000552341 MROH5Q6ZUA9 1318 aa13.09□□□□□ -0.31
PFDN5-216ENST00000552341 ZPR1O75312 459 aa13.09□□□□□ -0.31
PFDN5-216ENST00000552341 TRIM37O94972 964 aa13.09□□□□□ -0.31
PFDN5-216ENST00000552341 NFKBIBQ15653 356 aa13.09□□□□□ -0.31
PFDN5-216ENST00000552341 CCDC158Q5M9N0 1113 aa13.09□□□□□ -0.31
PFDN5-216ENST00000552341 ZNF512BQ96KM6 892 aaPredicted RBP13.09□□□□□ -0.31
PFDN5-216ENST00000552341 A0A1B0GUL6 1792 aa13.08□□□□□ -0.32
PFDN5-216ENST00000552341 TAF5LO75529 589 aa13.08□□□□□ -0.32
PFDN5-216ENST00000552341 ZNF772Q68DY9 489 aaPredicted RBP13.08□□□□□ -0.32
PFDN5-216ENST00000552341 PROM2Q8N271 834 aa13.08□□□□□ -0.32
PFDN5-216ENST00000552341 SETDB2Q96T68 719 aa13.08□□□□□ -0.32
PFDN5-216ENST00000552341 SEC62Q99442 399 aaKnown RBP13.08□□□□□ -0.32
PFDN5-216ENST00000552341 SLC27A3Q5K4L6 730 aa13.07□□□□□ -0.32
PFDN5-216ENST00000552341 TTC39AQ5SRH9 613 aa13.07□□□□□ -0.32
PFDN5-216ENST00000552341 TRAPPC3LQ5T215 181 aa13.07□□□□□ -0.32
PFDN5-216ENST00000552341 HELBQ8NG08 1087 aaPredicted RBP13.07□□□□□ -0.32
PFDN5-216ENST00000552341 ANO8Q9HCE9 1232 aaPredicted RBP13.07□□□□□ -0.32
PFDN5-216ENST00000552341 RBM8AQ9Y5S9 174 aaKnown RBP13.07□□□□□ -0.32
PFDN5-216ENST00000552341 MCAMP43121 646 aa13.07□□□□□ -0.32
PFDN5-216ENST00000552341 PUM3Q15397 648 aaKnown RBP13.07□□□□□ -0.32
PFDN5-216ENST00000552341 SLFNL1Q499Z3 407 aa13.07□□□□□ -0.32
PFDN5-216ENST00000552341 GORABQ5T7V8 394 aa13.07□□□□□ -0.32
PFDN5-216ENST00000552341 IL27Q8NEV9 243 aa13.07□□□□□ -0.32
PFDN5-216ENST00000552341 LPIN2Q92539 896 aa13.07□□□□□ -0.32
PFDN5-216ENST00000552341 MPHOSPH8Q99549 860 aa13.07□□□□□ -0.32
PFDN5-216ENST00000552341 UPF3BQ9BZI7 483 aaKnown RBP13.07□□□□□ -0.32
PFDN5-216ENST00000552341 NYXQ9GZU5 481 aa13.07□□□□□ -0.32
PFDN5-216ENST00000552341 CHMP5Q9NZZ3 219 aa13.07□□□□□ -0.32
PFDN5-216ENST00000552341 SNAP23O00161 211 aa13.06□□□□□ -0.32
PFDN5-216ENST00000552341 ADRA2BP18089 450 aa13.06□□□□□ -0.32
PFDN5-216ENST00000552341 RFC4P35249 363 aa13.06□□□□□ -0.32
PFDN5-216ENST00000552341 MCMDC2Q4G0Z9 681 aa13.06□□□□□ -0.32
PFDN5-216ENST00000552341 ZMYM1Q5SVZ6 1142 aa13.06□□□□□ -0.32
PFDN5-216ENST00000552341 PI16Q6UXB8 463 aa13.06□□□□□ -0.32
PFDN5-216ENST00000552341 TTC14Q96N46 770 aa13.06□□□□□ -0.32
PFDN5-216ENST00000552341 MYH7P12883 1935 aa13.05□□□□□ -0.32
PFDN5-216ENST00000552341 PHF14O94880 888 aa13.05□□□□□ -0.32
PFDN5-216ENST00000552341 ARID4AP29374 1257 aaPredicted RBP13.05□□□□□ -0.32
PFDN5-216ENST00000552341 ZAP70P43403 619 aa13.05□□□□□ -0.32
PFDN5-216ENST00000552341 FKBP4Q02790 459 aaKnown RBP eCLIP13.05□□□□□ -0.32
PFDN5-216ENST00000552341 ADCK5Q3MIX3 580 aa13.05□□□□□ -0.32
PFDN5-216ENST00000552341 CREB3L3Q68CJ9 461 aa13.05□□□□□ -0.32
PFDN5-216ENST00000552341 PRPF40BQ6NWY9 871 aaKnown RBP13.05□□□□□ -0.32
PFDN5-216ENST00000552341 NBPF5PQ86XG9 351 aaPredicted RBP13.05□□□□□ -0.32
PFDN5-216ENST00000552341 MYO5AQ9Y4I1 1855 aaKnown RBP13.05□□□□□ -0.32
PFDN5-216ENST00000552341 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.05□□□□□ -0.32
PFDN5-216ENST00000552341 IGHMBP2P38935 993 aaKnown RBP13.05□□□□□ -0.32
PFDN5-216ENST00000552341 PHKA1P46020 1223 aa13.05□□□□□ -0.32
PFDN5-216ENST00000552341 CCDC102BQ68D86 513 aa13.05□□□□□ -0.32
PFDN5-216ENST00000552341 CCDC129Q6ZRS4 1044 aa13.05□□□□□ -0.32
PFDN5-216ENST00000552341 CDC5LQ99459 802 aaKnown RBP13.05□□□□□ -0.32
PFDN5-216ENST00000552341 HELLSQ9NRZ9 838 aa13.05□□□□□ -0.32
PFDN5-216ENST00000552341 CIZ1Q9ULV3 898 aaPredicted RBP13.05□□□□□ -0.32
PFDN5-216ENST00000552341 TNRC6CQ9HCJ0 1690 aaKnown RBP13.05□□□□□ -0.32
PFDN5-216ENST00000552341 SLC27A2O14975 620 aa13.04□□□□□ -0.32
PFDN5-216ENST00000552341 RNF113AO15541 343 aaKnown RBP13.04□□□□□ -0.32
PFDN5-216ENST00000552341 FRAT2O75474 233 aaPredicted RBP13.04□□□□□ -0.32
PFDN5-216ENST00000552341 SSFA2P28290 1259 aa13.04□□□□□ -0.32
PFDN5-216ENST00000552341 MCM2P49736 904 aa13.04□□□□□ -0.32
PFDN5-216ENST00000552341 CHRNDQ07001 517 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms