RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 LCE2AQ5TA79 106 aaPredicted RBP7.36□□□□□ -1.23
HOXB3-213ENST00000552000 SULT6B1Q6IMI4 303 aa7.36□□□□□ -1.23
HOXB3-213ENST00000552000 PRPF40BQ6NWY9 871 aaKnown RBP7.36□□□□□ -1.23
HOXB3-213ENST00000552000 BLOC1S3Q6QNY0 202 aa7.36□□□□□ -1.23
HOXB3-213ENST00000552000 PAXIP1Q6ZW49 1069 aaPredicted RBP7.36□□□□□ -1.23
HOXB3-213ENST00000552000 CNTROBQ8N137 903 aa7.36□□□□□ -1.23
HOXB3-213ENST00000552000 CNKSR1Q969H4 720 aa7.36□□□□□ -1.23
HOXB3-213ENST00000552000 LGR6Q9HBX8 967 aa7.36□□□□□ -1.23
HOXB3-213ENST00000552000 ZNF330Q9Y3S2 320 aaPredicted RBP7.36□□□□□ -1.23
HOXB3-213ENST00000552000 TRPM7Q96QT4 1865 aa7.35□□□□□ -1.23
HOXB3-213ENST00000552000 A0A087WZG4 1122 aa7.35□□□□□ -1.23
HOXB3-213ENST00000552000 NPHP1O15259 732 aa7.35□□□□□ -1.23
HOXB3-213ENST00000552000 RNMTO43148 476 aaKnown RBP7.35□□□□□ -1.23
HOXB3-213ENST00000552000 EPHX2P34913 555 aa7.35□□□□□ -1.23
HOXB3-213ENST00000552000 EIF5P55010 431 aaKnown RBP7.35□□□□□ -1.23
HOXB3-213ENST00000552000 SOGA3Q5TF21 947 aa7.35□□□□□ -1.23
HOXB3-213ENST00000552000 PADI6Q6TGC4 694 aa7.35□□□□□ -1.23
HOXB3-213ENST00000552000 CAPNS2Q96L46 248 aa7.35□□□□□ -1.23
HOXB3-213ENST00000552000 POLR3GLQ9BT43 218 aa7.35□□□□□ -1.23
HOXB3-213ENST00000552000 BEGAINQ9BUH8 593 aa7.35□□□□□ -1.23
HOXB3-213ENST00000552000 ZNF277Q9NRM2 450 aaPredicted RBP7.35□□□□□ -1.23
HOXB3-213ENST00000552000 TBC1D2BQ9UPU7 963 aa7.35□□□□□ -1.23
HOXB3-213ENST00000552000 RNF123Q5XPI4 1314 aa7.34□□□□□ -1.23
HOXB3-213ENST00000552000 ADAMTSL1Q8N6G6 1762 aa7.34□□□□□ -1.23
HOXB3-213ENST00000552000 ARFGEF2Q9Y6D5 1785 aa7.34□□□□□ -1.23
HOXB3-213ENST00000552000 TLL1O43897 1013 aa7.34□□□□□ -1.23
HOXB3-213ENST00000552000 STARD3NLO95772 234 aa7.34□□□□□ -1.23
HOXB3-213ENST00000552000 SRGNP10124 158 aa7.34□□□□□ -1.23
HOXB3-213ENST00000552000 FMR1Q06787 632 aaKnown RBP eCLIP7.34□□□□□ -1.236e-9■■■■□ 25.3
HOXB3-213ENST00000552000 CCDC93Q567U6 631 aa7.34□□□□□ -1.23
HOXB3-213ENST00000552000 AKAP4Q5JQC9 854 aa7.34□□□□□ -1.23
HOXB3-213ENST00000552000 STYK1Q6J9G0 422 aa7.34□□□□□ -1.23
HOXB3-213ENST00000552000 CYP4F22Q6NT55 531 aa7.34□□□□□ -1.23
HOXB3-213ENST00000552000 OLFM4Q6UX06 510 aa7.34□□□□□ -1.23
HOXB3-213ENST00000552000 CNBD1Q8NA66 436 aa7.34□□□□□ -1.23
HOXB3-213ENST00000552000 MASTLQ96GX5 879 aa7.34□□□□□ -1.23
HOXB3-213ENST00000552000 MCOLN1Q9GZU1 580 aa7.34□□□□□ -1.23
HOXB3-213ENST00000552000 DDX21Q9NR30 783 aaKnown RBP eCLIP7.34□□□□□ -1.23
HOXB3-213ENST00000552000 TRIOBPQ9H2D6 2365 aa7.34□□□□□ -1.23
HOXB3-213ENST00000552000 MRC1P22897 1456 aa7.33□□□□□ -1.24
HOXB3-213ENST00000552000 S1PR4O95977 384 aa7.33□□□□□ -1.24
HOXB3-213ENST00000552000 ECE1P42892 770 aa7.33□□□□□ -1.24
HOXB3-213ENST00000552000 ST5P78524 1137 aa7.33□□□□□ -1.24
HOXB3-213ENST00000552000 PNMA8AQ86V59 439 aaPredicted RBP7.33□□□□□ -1.24
HOXB3-213ENST00000552000 C7orf43Q8WVR3 580 aa7.33□□□□□ -1.24
HOXB3-213ENST00000552000 EMID1Q96A84 441 aaPredicted RBP7.33□□□□□ -1.24
HOXB3-213ENST00000552000 GPR101Q96P66 508 aaPredicted RBP7.33□□□□□ -1.24
HOXB3-213ENST00000552000 SETDB2Q96T68 719 aa7.33□□□□□ -1.24
HOXB3-213ENST00000552000 SCN7AQ01118 1682 aa7.32□□□□□ -1.24
HOXB3-213ENST00000552000 PPEF1O14829 653 aaPredicted RBP7.32□□□□□ -1.24
HOXB3-213ENST00000552000 ST8SIA5O15466 376 aa7.32□□□□□ -1.24
HOXB3-213ENST00000552000 AOC2O75106 756 aa7.32□□□□□ -1.24
HOXB3-213ENST00000552000 FKBP4Q02790 459 aaKnown RBP eCLIP7.32□□□□□ -1.24
HOXB3-213ENST00000552000 E2F4Q16254 413 aa7.32□□□□□ -1.24
HOXB3-213ENST00000552000 KMT5BQ4FZB7 885 aa7.32□□□□□ -1.24
HOXB3-213ENST00000552000 LIAT1Q6ZQX7 453 aa7.32□□□□□ -1.24
HOXB3-213ENST00000552000 VSIG10Q8N0Z9 540 aa7.32□□□□□ -1.24
HOXB3-213ENST00000552000 UBR2Q8IWV8 1755 aa7.32□□□□□ -1.24
HOXB3-213ENST00000552000 THSD7BQ9C0I4 1608 aa7.31□□□□□ -1.24
HOXB3-213ENST00000552000 TRAF5O00463 557 aa7.31□□□□□ -1.24
HOXB3-213ENST00000552000 GDF9O60383 454 aa7.31□□□□□ -1.24
HOXB3-213ENST00000552000 CAMTA2O94983 1202 aa7.31□□□□□ -1.24
HOXB3-213ENST00000552000 OSBPP22059 807 aa7.31□□□□□ -1.24
HOXB3-213ENST00000552000 IL13P35225 146 aa7.31□□□□□ -1.24
HOXB3-213ENST00000552000 IARSP41252 1262 aaKnown RBP7.31□□□□□ -1.24
HOXB3-213ENST00000552000 DGKZQ13574 1117 aa7.31□□□□□ -1.24
HOXB3-213ENST00000552000 MORC1Q86VD1 984 aa7.31□□□□□ -1.24
HOXB3-213ENST00000552000 TTC5Q8N0Z6 440 aa7.31□□□□□ -1.24
HOXB3-213ENST00000552000 ZNF496Q96IT1 587 aaPredicted RBP7.31□□□□□ -1.24
HOXB3-213ENST00000552000 AAASQ9NRG9 546 aa7.31□□□□□ -1.24
HOXB3-213ENST00000552000 GJA3Q9Y6H8 435 aa7.31□□□□□ -1.24
HOXB3-213ENST00000552000 POLR2AP24928 1970 aaKnown RBP7.3□□□□□ -1.24
HOXB3-213ENST00000552000 FZD9O00144 591 aa7.3□□□□□ -1.24
HOXB3-213ENST00000552000 A1BGP04217 495 aa7.3□□□□□ -1.24
HOXB3-213ENST00000552000 HMOX1P09601 288 aa7.3□□□□□ -1.24
HOXB3-213ENST00000552000 NPR1P16066 1061 aa7.3□□□□□ -1.24
HOXB3-213ENST00000552000 LMOD1P29536 600 aaPredicted RBP7.3□□□□□ -1.24
HOXB3-213ENST00000552000 IL6STP40189 918 aaPredicted RBP7.3□□□□□ -1.24
HOXB3-213ENST00000552000 EPS15P42566 896 aa7.3□□□□□ -1.24
HOXB3-213ENST00000552000 NPM2Q86SE8 214 aaKnown RBP7.3□□□□□ -1.24
HOXB3-213ENST00000552000 NBPF5PQ86XG9 351 aaPredicted RBP7.3□□□□□ -1.24
HOXB3-213ENST00000552000 RTKN2Q8IZC4 609 aa7.3□□□□□ -1.24
HOXB3-213ENST00000552000 GPC2Q8N158 579 aa7.3□□□□□ -1.24
HOXB3-213ENST00000552000 SYNE4Q8N205 404 aa7.3□□□□□ -1.24
HOXB3-213ENST00000552000 TTC13Q8NBP0 860 aa7.3□□□□□ -1.24
HOXB3-213ENST00000552000 WDR70Q9NW82 654 aa7.3□□□□□ -1.24
HOXB3-213ENST00000552000 LTBP1Q14766 1721 aa7.3□□□□□ -1.24
HOXB3-213ENST00000552000 MAP2K2P36507 400 aa7.29□□□□□ -1.24
HOXB3-213ENST00000552000 MTHFSDQ2M296 383 aaKnown RBP7.29□□□□□ -1.24
HOXB3-213ENST00000552000 CST9Q5W186 159 aa7.29□□□□□ -1.24
HOXB3-213ENST00000552000 DZIP3Q86Y13 1208 aaKnown RBP7.29□□□□□ -1.24
HOXB3-213ENST00000552000 JDP2Q8WYK2 163 aa7.29□□□□□ -1.24
HOXB3-213ENST00000552000 TEX13AQ9BXU3 409 aaPredicted RBP7.29□□□□□ -1.24
HOXB3-213ENST00000552000 PANK3Q9H999 370 aa7.29□□□□□ -1.24
HOXB3-213ENST00000552000 TLL2Q9Y6L7 1015 aa7.29□□□□□ -1.24
HOXB3-213ENST00000552000 A0A0C4DFX4 3053 aa7.29□□□□□ -1.24
HOXB3-213ENST00000552000 HEG1Q9ULI3 1381 aa7.29□□□□□ -1.24
HOXB3-213ENST00000552000 BCORQ6W2J9 1755 aa7.28□□□□□ -1.24
HOXB3-213ENST00000552000 FAM177BA6PVY3 158 aa7.28□□□□□ -1.24
HOXB3-213ENST00000552000 CA12O43570 354 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms