RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 PLA2G12BQ9BX93 195 aa16.67■□□□□ 0.26
NPAS3-209ENST00000551008 KCNQ5Q9NR82 932 aa16.67■□□□□ 0.26
NPAS3-209ENST00000551008 GPRC5DQ9NZD1 345 aa16.67■□□□□ 0.26
NPAS3-209ENST00000551008 POLR2AP24928 1970 aaKnown RBP16.67■□□□□ 0.26
NPAS3-209ENST00000551008 GMPSP49915 693 aaPredicted RBP16.66■□□□□ 0.26
NPAS3-209ENST00000551008 BEND3Q5T5X7 828 aa16.66■□□□□ 0.26
NPAS3-209ENST00000551008 DBNDD1Q9H9R9 158 aa16.66■□□□□ 0.26
NPAS3-209ENST00000551008 RIMBP2O15034 1052 aa16.65■□□□□ 0.26
NPAS3-209ENST00000551008 HSP90B1P14625 803 aaKnown RBP16.65■□□□□ 0.26
NPAS3-209ENST00000551008 FMR1Q06787 632 aaKnown RBP eCLIP16.65■□□□□ 0.26
NPAS3-209ENST00000551008 WASHC4Q2M389 1173 aa16.65■□□□□ 0.26
NPAS3-209ENST00000551008 MAP1SQ66K74 1059 aaPredicted RBP16.65■□□□□ 0.26
NPAS3-209ENST00000551008 CIAPIN1Q6FI81 312 aa16.65■□□□□ 0.26
NPAS3-209ENST00000551008 PNMA8AQ86V59 439 aaPredicted RBP16.65■□□□□ 0.26
NPAS3-209ENST00000551008 C6orf229H3BNL8 230 aa16.64■□□□□ 0.25
NPAS3-209ENST00000551008 CSF1RP07333 972 aa16.64■□□□□ 0.25
NPAS3-209ENST00000551008 SLFN5Q08AF3 891 aa16.64■□□□□ 0.25
NPAS3-209ENST00000551008 CDCA7LQ96GN5 454 aa16.64■□□□□ 0.25
NPAS3-209ENST00000551008 CCER2I3L3R5 266 aa16.63■□□□□ 0.25
NPAS3-209ENST00000551008 PSMD14O00487 310 aa16.63■□□□□ 0.25
NPAS3-209ENST00000551008 ECE2O60344 883 aa16.63■□□□□ 0.25
NPAS3-209ENST00000551008 UFL1O94874 794 aa16.63■□□□□ 0.25
NPAS3-209ENST00000551008 LMOD1P29536 600 aaPredicted RBP16.63■□□□□ 0.25
NPAS3-209ENST00000551008 HIRAP54198 1017 aaPredicted RBP16.63■□□□□ 0.25
NPAS3-209ENST00000551008 DOK7Q18PE1 504 aa16.63■□□□□ 0.25
NPAS3-209ENST00000551008 FAM161AQ3B820 660 aa16.63■□□□□ 0.25
NPAS3-209ENST00000551008 ANKRD18AQ8IVF6 992 aa16.63■□□□□ 0.25
NPAS3-209ENST00000551008 CNTROBQ8N137 903 aa16.63■□□□□ 0.25
NPAS3-209ENST00000551008 TRPM4Q8TD43 1214 aa16.63■□□□□ 0.25
NPAS3-209ENST00000551008 CREBZFQ9NS37 354 aa16.63■□□□□ 0.25
NPAS3-209ENST00000551008 ZBTB12Q9Y330 459 aaPredicted RBP16.63■□□□□ 0.25
NPAS3-209ENST00000551008 FOXO4P98177 505 aa16.62■□□□□ 0.25
NPAS3-209ENST00000551008 EPHA10Q5JZY3 1008 aa16.62■□□□□ 0.25
NPAS3-209ENST00000551008 TRMT2AQ8IZ69 625 aaKnown RBP16.62■□□□□ 0.25
NPAS3-209ENST00000551008 MINPP1Q9UNW1 487 aa16.62■□□□□ 0.25
NPAS3-209ENST00000551008 CLEC11AQ9Y240 323 aa16.62■□□□□ 0.25
NPAS3-209ENST00000551008 XDHP47989 1333 aa16.62■□□□□ 0.25
NPAS3-209ENST00000551008 USP50Q70EL3 339 aaPredicted RBP16.61■□□□□ 0.25
NPAS3-209ENST00000551008 MRPL50Q8N5N7 158 aaKnown RBP16.61■□□□□ 0.25
NPAS3-209ENST00000551008 CDC5LQ99459 802 aaKnown RBP16.61■□□□□ 0.25
NPAS3-209ENST00000551008 ADARB2Q9NS39 739 aaKnown RBP16.61■□□□□ 0.25
NPAS3-209ENST00000551008 BSDC1Q9NW68 430 aaPredicted RBP16.61■□□□□ 0.25
NPAS3-209ENST00000551008 GGA1Q9UJY5 639 aa16.61■□□□□ 0.25
NPAS3-209ENST00000551008 ZNF609O15014 1411 aa16.61■□□□□ 0.25
NPAS3-209ENST00000551008 E9PSI1 815 aa16.6■□□□□ 0.25
NPAS3-209ENST00000551008 EGFRP00533 1210 aa16.6■□□□□ 0.25
NPAS3-209ENST00000551008 ITGA6P23229 1130 aa16.6■□□□□ 0.25
NPAS3-209ENST00000551008 TNIP1Q15025 636 aa16.6■□□□□ 0.25
NPAS3-209ENST00000551008 EYA3Q99504 573 aa16.6■□□□□ 0.25
NPAS3-209ENST00000551008 ANKIB1Q9P2G1 1089 aa16.6■□□□□ 0.25
NPAS3-209ENST00000551008 CNTNAP1P78357 1384 aa16.6■□□□□ 0.25
NPAS3-209ENST00000551008 THSD7BQ9C0I4 1608 aa16.59■□□□□ 0.25
NPAS3-209ENST00000551008 TRAF5O00463 557 aa16.59■□□□□ 0.25
NPAS3-209ENST00000551008 SSH1Q8WYL5 1049 aa16.59■□□□□ 0.25
NPAS3-209ENST00000551008 KAZALD1Q96I82 304 aa16.59■□□□□ 0.25
NPAS3-209ENST00000551008 PGAP2Q9UHJ9 254 aa16.59■□□□□ 0.25
NPAS3-209ENST00000551008 GRM8O00222 908 aa16.58■□□□□ 0.24
NPAS3-209ENST00000551008 KLRK1P26718 216 aa16.58■□□□□ 0.24
NPAS3-209ENST00000551008 TXNRD3Q86VQ6 643 aa16.58■□□□□ 0.24
NPAS3-209ENST00000551008 MICALL2Q8IY33 904 aa16.58■□□□□ 0.24
NPAS3-209ENST00000551008 DPF2Q92785 391 aa16.58■□□□□ 0.24
NPAS3-209ENST00000551008 ZC3H12CQ9C0D7 883 aaKnown RBP16.58■□□□□ 0.24
NPAS3-209ENST00000551008 MKRN1Q9UHC7 482 aaKnown RBP16.58■□□□□ 0.24
NPAS3-209ENST00000551008 CNOT7Q9UIV1 285 aaKnown RBP16.58■□□□□ 0.24
NPAS3-209ENST00000551008 IRS2Q9Y4H2 1338 aa16.58■□□□□ 0.24
NPAS3-209ENST00000551008 MED23Q9ULK4 1368 aa16.58■□□□□ 0.24
NPAS3-209ENST00000551008 TMEM88BA6NKF7 163 aa16.57■□□□□ 0.24
NPAS3-209ENST00000551008 VIL1P09327 827 aaKnown RBP16.57■□□□□ 0.24
NPAS3-209ENST00000551008 ATP2B4P23634 1241 aa16.57■□□□□ 0.24
NPAS3-209ENST00000551008 CCT4P50991 539 aaKnown RBP16.57■□□□□ 0.24
NPAS3-209ENST00000551008 BCL2L13Q9BXK5 485 aa16.57■□□□□ 0.24
NPAS3-209ENST00000551008 UTYO14607 1347 aa16.56■□□□□ 0.24
NPAS3-209ENST00000551008 ALDH1L1O75891 902 aa16.56■□□□□ 0.24
NPAS3-209ENST00000551008 CST9Q5W186 159 aa16.56■□□□□ 0.24
NPAS3-209ENST00000551008 SAMD7Q7Z3H4 446 aa16.56■□□□□ 0.24
NPAS3-209ENST00000551008 GMLQ99445 158 aa16.56■□□□□ 0.24
NPAS3-209ENST00000551008 SNAP23O00161 211 aa16.55■□□□□ 0.24
NPAS3-209ENST00000551008 SLC4A10Q6U841 1118 aa16.55■□□□□ 0.24
NPAS3-209ENST00000551008 DLK2Q6UY11 383 aa16.55■□□□□ 0.24
NPAS3-209ENST00000551008 SUCLG2Q96I99 432 aa16.55■□□□□ 0.24
NPAS3-209ENST00000551008 GLIS2Q9BZE0 524 aaPredicted RBP16.55■□□□□ 0.24
NPAS3-209ENST00000551008 ASTN2O75129 1339 aaPredicted RBP16.54■□□□□ 0.24
NPAS3-209ENST00000551008 RASSF10A6NK89 507 aa16.54■□□□□ 0.24
NPAS3-209ENST00000551008 NBPF7P0C2Y1 421 aaPredicted RBP16.54■□□□□ 0.24
NPAS3-209ENST00000551008 RPS12P25398 132 aaKnown RBP16.54■□□□□ 0.24
NPAS3-209ENST00000551008 IGHMBP2P38935 993 aaKnown RBP16.54■□□□□ 0.24
NPAS3-209ENST00000551008 CHRNDQ07001 517 aa16.54■□□□□ 0.24
NPAS3-209ENST00000551008 TBC1D10BQ4KMP7 808 aaPredicted RBP16.54■□□□□ 0.24
NPAS3-209ENST00000551008 LMBR1LQ6UX01 489 aa16.54■□□□□ 0.24
NPAS3-209ENST00000551008 SRCIN1Q9C0H9 1055 aa16.54■□□□□ 0.24
NPAS3-209ENST00000551008 VEGFBP49765 207 aa16.53■□□□□ 0.24
NPAS3-209ENST00000551008 RSBN1LQ6PCB5 846 aaPredicted RBP16.53■□□□□ 0.24
NPAS3-209ENST00000551008 ZC3H15Q8WU90 426 aaKnown RBP16.53■□□□□ 0.24
NPAS3-209ENST00000551008 ZNF594Q96JF6 807 aaPredicted RBP16.53■□□□□ 0.24
NPAS3-209ENST00000551008 PTPRCP08575 1304 aa16.52■□□□□ 0.24
NPAS3-209ENST00000551008 ANKRD18BA2A2Z9 1011 aa16.52■□□□□ 0.24
NPAS3-209ENST00000551008 H7C1D1 291 aa16.52■□□□□ 0.24
NPAS3-209ENST00000551008 ZNF280AP59817 542 aaPredicted RBP16.52■□□□□ 0.24
NPAS3-209ENST00000551008 MXD3Q9BW11 206 aa16.52■□□□□ 0.24
NPAS3-209ENST00000551008 LEMD3Q9Y2U8 911 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms