RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 TBC1D16Q8TBP0 767 aa17.56■□□□□ 0.4
TROAP-211ENST00000549891 DCPSQ96C86 337 aaKnown RBP17.56■□□□□ 0.4
TROAP-211ENST00000549891 PODXL2Q9NZ53 605 aa17.56■□□□□ 0.4
TROAP-211ENST00000549891 CASP8AP2Q9UKL3 1982 aa17.55■□□□□ 0.4
TROAP-211ENST00000549891 CCDC152Q4G0S7 254 aa17.55■□□□□ 0.4
TROAP-211ENST00000549891 TBC1D10BQ4KMP7 808 aaPredicted RBP17.55■□□□□ 0.4
TROAP-211ENST00000549891 KRT26Q7Z3Y9 468 aa17.55■□□□□ 0.4
TROAP-211ENST00000549891 CCDC191Q8NCU4 936 aa17.55■□□□□ 0.4
TROAP-211ENST00000549891 ANKIB1Q9P2G1 1089 aa17.55■□□□□ 0.4
TROAP-211ENST00000549891 SCN9AQ15858 1988 aa17.55■□□□□ 0.4
TROAP-211ENST00000549891 COL4A1P02462 1669 aa17.55■□□□□ 0.4
TROAP-211ENST00000549891 PSME4Q14997 1843 aa17.54■□□□□ 0.4
TROAP-211ENST00000549891 DDX58O95786 925 aaKnown RBP17.54■□□□□ 0.4
TROAP-211ENST00000549891 HUNKP57058 714 aa17.54■□□□□ 0.4
TROAP-211ENST00000549891 DOK7Q18PE1 504 aa17.54■□□□□ 0.4
TROAP-211ENST00000549891 MYD88Q99836 296 aa17.54■□□□□ 0.4
TROAP-211ENST00000549891 PHAXQ9H814 394 aaKnown RBP17.54■□□□□ 0.4
TROAP-211ENST00000549891 TSKSQ9UJT2 592 aa17.54■□□□□ 0.4
TROAP-211ENST00000549891 RTL9Q8NET4 1388 aa17.53■□□□□ 0.4
TROAP-211ENST00000549891 MYH3P11055 1940 aa17.53■□□□□ 0.4
TROAP-211ENST00000549891 PDE8AO60658 829 aa17.53■□□□□ 0.4
TROAP-211ENST00000549891 PCCAP05165 728 aaPredicted RBP17.53■□□□□ 0.4
TROAP-211ENST00000549891 C2orf69Q8N8R5 385 aa17.53■□□□□ 0.4
TROAP-211ENST00000549891 PRKRIP1Q9H875 184 aaPredicted RBP17.53■□□□□ 0.4
TROAP-211ENST00000549891 CWC25Q9NXE8 425 aaPredicted RBP17.53■□□□□ 0.4
TROAP-211ENST00000549891 GGA1Q9UJY5 639 aa17.53■□□□□ 0.4
TROAP-211ENST00000549891 ELL2O00472 640 aaPredicted RBP17.52■□□□□ 0.4
TROAP-211ENST00000549891 APAF1O14727 1248 aa17.52■□□□□ 0.4
TROAP-211ENST00000549891 UFL1O94874 794 aa17.52■□□□□ 0.4
TROAP-211ENST00000549891 VIL1P09327 827 aaKnown RBP17.52■□□□□ 0.4
TROAP-211ENST00000549891 KIF4BQ2VIQ3 1234 aa17.52■□□□□ 0.4
TROAP-211ENST00000549891 RBM26Q5T8P6 1007 aaKnown RBP17.52■□□□□ 0.4
TROAP-211ENST00000549891 CCDC30Q5VVM6 783 aa17.52■□□□□ 0.4
TROAP-211ENST00000549891 GBA2Q9HCG7 927 aaPredicted RBP17.52■□□□□ 0.4
TROAP-211ENST00000549891 SEC31BQ9NQW1 1179 aa17.52■□□□□ 0.4
TROAP-211ENST00000549891 AKAP11Q9UKA4 1901 aa17.52■□□□□ 0.4
TROAP-211ENST00000549891 CCDC85CA6NKD9 419 aa17.51■□□□□ 0.39
TROAP-211ENST00000549891 RGMBQ6NW40 437 aa17.51■□□□□ 0.39
TROAP-211ENST00000549891 SULF1Q8IWU6 871 aa17.51■□□□□ 0.39
TROAP-211ENST00000549891 CCDC102AQ96A19 550 aa17.51■□□□□ 0.39
TROAP-211ENST00000549891 KCNQ5Q9NR82 932 aa17.51■□□□□ 0.39
TROAP-211ENST00000549891 ZNF609O15014 1411 aa17.5■□□□□ 0.39
TROAP-211ENST00000549891 EGFRP00533 1210 aa17.5■□□□□ 0.39
TROAP-211ENST00000549891 ANKRD18AQ8IVF6 992 aa17.5■□□□□ 0.39
TROAP-211ENST00000549891 AGBL3Q8NEM8 1001 aa17.5■□□□□ 0.39
TROAP-211ENST00000549891 METTL22Q9BUU2 404 aaPredicted RBP17.5■□□□□ 0.39
TROAP-211ENST00000549891 XDHP47989 1333 aa17.49■□□□□ 0.39
TROAP-211ENST00000549891 ADM5C9JUS6 153 aa17.49■□□□□ 0.39
TROAP-211ENST00000549891 GGA3Q9NZ52 723 aa17.49■□□□□ 0.39
TROAP-211ENST00000549891 ZNF157P51786 506 aaPredicted RBP17.48■□□□□ 0.39
TROAP-211ENST00000549891 FAM161AQ3B820 660 aa17.48■□□□□ 0.39
TROAP-211ENST00000549891 RSBN1LQ6PCB5 846 aaPredicted RBP17.48■□□□□ 0.39
TROAP-211ENST00000549891 CDC5LQ99459 802 aaKnown RBP17.48■□□□□ 0.39
TROAP-211ENST00000549891 SPEF2Q9C093 1822 aa17.48■□□□□ 0.39
TROAP-211ENST00000549891 ATP2B4P23634 1241 aa17.47■□□□□ 0.39
TROAP-211ENST00000549891 ZNF280AP59817 542 aaPredicted RBP17.47■□□□□ 0.39
TROAP-211ENST00000549891 DLK2Q6UY11 383 aa17.47■□□□□ 0.39
TROAP-211ENST00000549891 PODNQ7Z5L7 613 aa17.47■□□□□ 0.39
TROAP-211ENST00000549891 C8orf58Q8NAV2 365 aa17.47■□□□□ 0.39
TROAP-211ENST00000549891 CCDC85AQ96PX6 553 aaPredicted RBP17.47■□□□□ 0.39
TROAP-211ENST00000549891 MCOLN1Q9GZU1 580 aa17.47■□□□□ 0.39
TROAP-211ENST00000549891 SAGE1Q9NXZ1 904 aa17.47■□□□□ 0.39
TROAP-211ENST00000549891 MAP3K2Q9Y2U5 619 aa17.47■□□□□ 0.39
TROAP-211ENST00000549891 FAM155AB1AL88 458 aaPredicted RBP17.46■□□□□ 0.39
TROAP-211ENST00000549891 MLLT1Q03111 559 aaPredicted RBP17.46■□□□□ 0.39
TROAP-211ENST00000549891 NEXNQ0ZGT2 675 aa17.46■□□□□ 0.39
TROAP-211ENST00000549891 KSR2Q6VAB6 950 aa17.46■□□□□ 0.39
TROAP-211ENST00000549891 STK31Q9BXU1 1019 aa17.46■□□□□ 0.39
TROAP-211ENST00000549891 USP17L3A6NCW0 530 aa17.45■□□□□ 0.38
TROAP-211ENST00000549891 USP17L4A6NCW7 530 aa17.45■□□□□ 0.38
TROAP-211ENST00000549891 USP17L8P0C7I0 530 aa17.45■□□□□ 0.38
TROAP-211ENST00000549891 RGS19P49795 217 aa17.45■□□□□ 0.38
TROAP-211ENST00000549891 CTSWP56202 376 aa17.45■□□□□ 0.38
TROAP-211ENST00000549891 DGKZQ13574 1117 aa17.45■□□□□ 0.38
TROAP-211ENST00000549891 SCARF1Q14162 830 aa17.45■□□□□ 0.38
TROAP-211ENST00000549891 ANGEL2Q5VTE6 544 aaKnown RBP17.45■□□□□ 0.38
TROAP-211ENST00000549891 USP17L1Q7RTZ2 530 aa17.45■□□□□ 0.38
TROAP-211ENST00000549891 ZIC5Q96T25 663 aa17.45■□□□□ 0.38
TROAP-211ENST00000549891 PITPNM2Q9BZ72 1349 aa17.45■□□□□ 0.38
TROAP-211ENST00000549891 CACNA1FO60840 1977 aa17.44■□□□□ 0.38
TROAP-211ENST00000549891 PI4KAP2A4QPH2 592 aa17.44■□□□□ 0.38
TROAP-211ENST00000549891 FKBP1BP68106 108 aa17.44■□□□□ 0.38
TROAP-211ENST00000549891 KIF23Q02241 960 aaPredicted RBP17.44■□□□□ 0.38
TROAP-211ENST00000549891 REM2Q8IYK8 340 aaPredicted RBP17.44■□□□□ 0.38
TROAP-211ENST00000549891 PI4KAP1Q8N8J0 262 aa17.44■□□□□ 0.38
TROAP-211ENST00000549891 JARID2Q92833 1246 aaPredicted RBP17.44■□□□□ 0.38
TROAP-211ENST00000549891 CDCA5Q96FF9 252 aa17.44■□□□□ 0.38
TROAP-211ENST00000549891 MYOZ2Q9NPC6 264 aa17.44■□□□□ 0.38
TROAP-211ENST00000549891 PAPPA2Q9BXP8 1791 aa17.43■□□□□ 0.38
TROAP-211ENST00000549891 MED23Q9ULK4 1368 aa17.43■□□□□ 0.38
TROAP-211ENST00000549891 SLC10A3P09131 477 aa17.43■□□□□ 0.38
TROAP-211ENST00000549891 BSDC1Q9NW68 430 aaPredicted RBP17.43■□□□□ 0.38
TROAP-211ENST00000549891 TSPYL6Q8N831 410 aa17.42■□□□□ 0.38
TROAP-211ENST00000549891 TTLL11Q8NHH1 800 aa17.42■□□□□ 0.38
TROAP-211ENST00000549891 GMLQ99445 158 aa17.42■□□□□ 0.38
TROAP-211ENST00000549891 MINPP1Q9UNW1 487 aa17.42■□□□□ 0.38
TROAP-211ENST00000549891 ASTN2O75129 1339 aaPredicted RBP17.42■□□□□ 0.38
TROAP-211ENST00000549891 IGKV5-2P06315 115 aa17.41■□□□□ 0.38
TROAP-211ENST00000549891 OGFOD1Q8N543 542 aa17.41■□□□□ 0.38
TROAP-211ENST00000549891 RNF186Q9NXI6 227 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms