RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 BCORQ6W2J9 1755 aa23.01■■□□□ 1.27
BRF1-215ENST00000549655 ZKSCAN1P17029 563 aaPredicted RBP23.01■■□□□ 1.27
BRF1-215ENST00000549655 CREB3L3Q68CJ9 461 aa23.01■■□□□ 1.27
BRF1-215ENST00000549655 TAF5LO75529 589 aa23■■□□□ 1.27
BRF1-215ENST00000549655 CASTP20810 708 aaKnown RBP23■■□□□ 1.27
BRF1-215ENST00000549655 MCMDC2Q4G0Z9 681 aa23■■□□□ 1.27
BRF1-215ENST00000549655 TICAM2Q86XR7 235 aa23■■□□□ 1.27
BRF1-215ENST00000549655 VGLL2Q8N8G2 317 aa23■■□□□ 1.27
BRF1-215ENST00000549655 TTC14Q96N46 770 aa23■■□□□ 1.27
BRF1-215ENST00000549655 TRPC5Q9UL62 973 aaPredicted RBP23■■□□□ 1.27
BRF1-215ENST00000549655 ATRNO75882 1429 aa23■■□□□ 1.27
BRF1-215ENST00000549655 ONECUT3O60422 494 aaPredicted RBP23■■□□□ 1.27
BRF1-215ENST00000549655 HSP90B1P14625 803 aaKnown RBP23■■□□□ 1.27
BRF1-215ENST00000549655 DEKP35659 375 aaKnown RBP23■■□□□ 1.27
BRF1-215ENST00000549655 CUL4AQ13619 759 aa23■■□□□ 1.27
BRF1-215ENST00000549655 RC3H1Q5TC82 1133 aaKnown RBP23■■□□□ 1.27
BRF1-215ENST00000549655 ADCK5Q3MIX3 580 aa22.99■■□□□ 1.27
BRF1-215ENST00000549655 JAKMIP1Q96N16 626 aaKnown RBP22.99■■□□□ 1.27
BRF1-215ENST00000549655 SEC62Q99442 399 aaKnown RBP22.99■■□□□ 1.27
BRF1-215ENST00000549655 SPEF2Q9C093 1822 aa22.98■■□□□ 1.27
BRF1-215ENST00000549655 SLC27A2O14975 620 aa22.98■■□□□ 1.27
BRF1-215ENST00000549655 FKBP4Q02790 459 aaKnown RBP eCLIP22.98■■□□□ 1.27
BRF1-215ENST00000549655 TM6SF1Q9BZW5 370 aa22.98■■□□□ 1.27
BRF1-215ENST00000549655 CCNL1Q9UK58 526 aaPredicted RBP22.98■■□□□ 1.27
BRF1-215ENST00000549655 DDX60Q8IY21 1712 aaKnown RBP22.98■■□□□ 1.27
BRF1-215ENST00000549655 PDE8BO95263 885 aa22.98■■□□□ 1.27
BRF1-215ENST00000549655 SSFA2P28290 1259 aa22.98■■□□□ 1.27
BRF1-215ENST00000549655 CCDC129Q6ZRS4 1044 aa22.98■■□□□ 1.27
BRF1-215ENST00000549655 SEPT12Q8IYM1 358 aa22.98■■□□□ 1.27
BRF1-215ENST00000549655 LRP5O75197 1615 aa22.97■■□□□ 1.27
BRF1-215ENST00000549655 CPA1P15085 419 aa22.97■■□□□ 1.27
BRF1-215ENST00000549655 NUCB2P80303 420 aa22.97■■□□□ 1.27
BRF1-215ENST00000549655 CCDC152Q4G0S7 254 aa22.97■■□□□ 1.27
BRF1-215ENST00000549655 RNF20Q5VTR2 975 aa22.97■■□□□ 1.27
BRF1-215ENST00000549655 SMIM5Q71RC9 77 aa22.97■■□□□ 1.27
BRF1-215ENST00000549655 AK2P54819 239 aa22.96■■□□□ 1.27
BRF1-215ENST00000549655 ZSWIM6Q9HCJ5 1215 aa22.96■■□□□ 1.27
BRF1-215ENST00000549655 MROH5Q6ZUA9 1318 aa22.96■■□□□ 1.27
BRF1-215ENST00000549655 ABCC12Q96J65 1359 aa22.96■■□□□ 1.27
BRF1-215ENST00000549655 RPS6KA4O75676 772 aa22.96■■□□□ 1.27
BRF1-215ENST00000549655 INTS4Q96HW7 963 aaKnown RBP22.96■■□□□ 1.27
BRF1-215ENST00000549655 GBP4Q96PP9 640 aa22.96■■□□□ 1.27
BRF1-215ENST00000549655 SEC31BQ9NQW1 1179 aa22.96■■□□□ 1.27
BRF1-215ENST00000549655 HELLSQ9NRZ9 838 aa22.96■■□□□ 1.27
BRF1-215ENST00000549655 SCARF1Q14162 830 aa22.95■■□□□ 1.26
BRF1-215ENST00000549655 SLFNL1Q499Z3 407 aa22.95■■□□□ 1.26
BRF1-215ENST00000549655 USPL1Q5W0Q7 1092 aa22.95■■□□□ 1.26
BRF1-215ENST00000549655 CYP46A1Q9Y6A2 500 aa22.95■■□□□ 1.26
BRF1-215ENST00000549655 LAMB2P55268 1798 aa22.95■■□□□ 1.26
BRF1-215ENST00000549655 RGL2O15211 777 aa22.94■■□□□ 1.26
BRF1-215ENST00000549655 GNPATO15228 680 aa22.94■■□□□ 1.26
BRF1-215ENST00000549655 RNF113AO15541 343 aaKnown RBP22.94■■□□□ 1.26
BRF1-215ENST00000549655 ZMYM1Q5SVZ6 1142 aa22.94■■□□□ 1.26
BRF1-215ENST00000549655 MPHOSPH8Q99549 860 aa22.94■■□□□ 1.26
BRF1-215ENST00000549655 HMG20BQ9P0W2 317 aa22.94■■□□□ 1.26
BRF1-215ENST00000549655 SBF2Q86WG5 1849 aa22.94■■□□□ 1.26
BRF1-215ENST00000549655 RTL9Q8NET4 1388 aa22.94■■□□□ 1.26
BRF1-215ENST00000549655 VPS53Q5VIR6 699 aa22.94■■□□□ 1.26
BRF1-215ENST00000549655 RUFY3Q7L099 469 aa22.94■■□□□ 1.26
BRF1-215ENST00000549655 PDRG1Q9NUG6 133 aa22.94■■□□□ 1.26
BRF1-215ENST00000549655 DDX11L8A8MPP1 907 aa22.93■■□□□ 1.26
BRF1-215ENST00000549655 CYP2E1P05181 493 aaPredicted RBP22.93■■□□□ 1.26
BRF1-215ENST00000549655 PSMA5P28066 241 aa22.93■■□□□ 1.26
BRF1-215ENST00000549655 ZAP70P43403 619 aa22.93■■□□□ 1.26
BRF1-215ENST00000549655 PUM3Q15397 648 aaKnown RBP22.93■■□□□ 1.26
BRF1-215ENST00000549655 HELBQ8NG08 1087 aaPredicted RBP22.93■■□□□ 1.26
BRF1-215ENST00000549655 BCL2L12Q9HB09 334 aa22.93■■□□□ 1.26
BRF1-215ENST00000549655 NARFQ9UHQ1 456 aa22.93■■□□□ 1.26
BRF1-215ENST00000549655 LIMCH1Q9UPQ0 1083 aa22.93■■□□□ 1.26
BRF1-215ENST00000549655 RPAP1Q9BWH6 1393 aaPredicted RBP22.93■■□□□ 1.26
BRF1-215ENST00000549655 PKP1Q13835 747 aa22.92■■□□□ 1.26
BRF1-215ENST00000549655 GSE1Q14687 1217 aa22.92■■□□□ 1.26
BRF1-215ENST00000549655 BICDL1Q6ZP65 573 aa22.92■■□□□ 1.26
BRF1-215ENST00000549655 QTRT2Q9H974 415 aaKnown RBP22.92■■□□□ 1.26
BRF1-215ENST00000549655 U3KPZ7 1027 aaPredicted RBP22.92■■□□□ 1.26
BRF1-215ENST00000549655 SCN7AQ01118 1682 aa22.92■■□□□ 1.26
BRF1-215ENST00000549655 LRRFIP1Q32MZ4 808 aaKnown RBP22.92■■□□□ 1.26
BRF1-215ENST00000549655 TSGA10IPQ3SY00 556 aa22.92■■□□□ 1.26
BRF1-215ENST00000549655 ERFEQ4G0M1 354 aa22.92■■□□□ 1.26
BRF1-215ENST00000549655 TBC1D9BQ66K14 1250 aa22.92■■□□□ 1.26
BRF1-215ENST00000549655 LPIN2Q92539 896 aa22.92■■□□□ 1.26
BRF1-215ENST00000549655 ZNF512BQ96KM6 892 aaPredicted RBP22.92■■□□□ 1.26
BRF1-215ENST00000549655 LY75O60449 1722 aa22.91■■□□□ 1.26
BRF1-215ENST00000549655 FGFR2P21802 821 aa22.91■■□□□ 1.26
BRF1-215ENST00000549655 IGHMBP2P38935 993 aaKnown RBP22.91■■□□□ 1.26
BRF1-215ENST00000549655 MCAMP43121 646 aa22.91■■□□□ 1.26
BRF1-215ENST00000549655 PI16Q6UXB8 463 aa22.91■■□□□ 1.26
BRF1-215ENST00000549655 LARP6Q9BRS8 491 aaKnown RBP22.91■■□□□ 1.26
BRF1-215ENST00000549655 SRP68Q9UHB9 627 aaKnown RBP22.91■■□□□ 1.26
BRF1-215ENST00000549655 RTCBQ9Y3I0 505 aaKnown RBP22.91■■□□□ 1.26
BRF1-215ENST00000549655 TAF6LQ9Y6J9 622 aa22.91■■□□□ 1.26
BRF1-215ENST00000549655 CLEC17AQ6ZS10 378 aa22.9■■□□□ 1.26
BRF1-215ENST00000549655 ZPR1O75312 459 aa22.9■■□□□ 1.26
BRF1-215ENST00000549655 TAF1LQ8IZX4 1826 aa22.89■■□□□ 1.26
BRF1-215ENST00000549655 CCDC102BQ68D86 513 aa22.89■■□□□ 1.26
BRF1-215ENST00000549655 MAST3O60307 1309 aa22.89■■□□□ 1.26
BRF1-215ENST00000549655 AKAP11Q9UKA4 1901 aa22.89■■□□□ 1.25
BRF1-215ENST00000549655 ZFYP08048 801 aaPredicted RBP22.89■■□□□ 1.25
BRF1-215ENST00000549655 BLOC1S2Q6QNY1 142 aa22.89■■□□□ 1.25
BRF1-215ENST00000549655 SLC5A1P13866 664 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms