RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 HYPKQ9NX55 129 aa21.41■■□□□ 1.02
SSH1-208ENST00000548522 SCN9AQ15858 1988 aa21.39■■□□□ 1.02
SSH1-208ENST00000548522 RPS8P62241 208 aaKnown RBP21.39■■□□□ 1.01
SSH1-208ENST00000548522 TRIM28Q13263 835 aaKnown RBP21.39■■□□□ 1.01
SSH1-208ENST00000548522 JARID2Q92833 1246 aaPredicted RBP21.39■■□□□ 1.01
SSH1-208ENST00000548522 MCOLN1Q9GZU1 580 aa21.39■■□□□ 1.01
SSH1-208ENST00000548522 FAM155AB1AL88 458 aaPredicted RBP21.38■■□□□ 1.01
SSH1-208ENST00000548522 ELL2O00472 640 aaPredicted RBP21.38■■□□□ 1.01
SSH1-208ENST00000548522 CA12O43570 354 aa21.38■■□□□ 1.01
SSH1-208ENST00000548522 NOGQ13253 232 aa21.38■■□□□ 1.01
SSH1-208ENST00000548522 CCDC85AQ96PX6 553 aaPredicted RBP21.38■■□□□ 1.01
SSH1-208ENST00000548522 UFL1O94874 794 aa21.37■■□□□ 1.01
SSH1-208ENST00000548522 ZNF853P0CG23 659 aa21.37■■□□□ 1.01
SSH1-208ENST00000548522 RPS12P25398 132 aaKnown RBP21.37■■□□□ 1.01
SSH1-208ENST00000548522 KIF4BQ2VIQ3 1234 aa21.37■■□□□ 1.01
SSH1-208ENST00000548522 RIC3Q7Z5B4 369 aa21.37■■□□□ 1.01
SSH1-208ENST00000548522 ZBTB38Q8NAP3 1195 aaPredicted RBP21.37■■□□□ 1.01
SSH1-208ENST00000548522 EYA3Q99504 573 aa21.37■■□□□ 1.01
SSH1-208ENST00000548522 MYD88Q99836 296 aa21.37■■□□□ 1.01
SSH1-208ENST00000548522 GBA2Q9HCG7 927 aaPredicted RBP21.37■■□□□ 1.01
SSH1-208ENST00000548522 GGA3Q9NZ52 723 aa21.37■■□□□ 1.01
SSH1-208ENST00000548522 GOLGA2Q08379 1002 aa21.36■■□□□ 1.01
SSH1-208ENST00000548522 PODXL2Q9NZ53 605 aa21.35■■□□□ 1.01
SSH1-208ENST00000548522 CASP8AP2Q9UKL3 1982 aa21.35■■□□□ 1.01
SSH1-208ENST00000548522 VIL1P09327 827 aaKnown RBP21.34■■□□□ 1.01
SSH1-208ENST00000548522 RGMBQ6NW40 437 aa21.34■■□□□ 1.01
SSH1-208ENST00000548522 DCPSQ96C86 337 aaKnown RBP21.34■■□□□ 1.01
SSH1-208ENST00000548522 ZC3H12CQ9C0D7 883 aaKnown RBP21.34■■□□□ 1.01
SSH1-208ENST00000548522 ANKIB1Q9P2G1 1089 aa21.34■■□□□ 1.01
SSH1-208ENST00000548522 APAF1O14727 1248 aa21.33■■□□□ 1.01
SSH1-208ENST00000548522 DGKZQ13574 1117 aa21.33■■□□□ 1.01
SSH1-208ENST00000548522 C8orf58Q8NAV2 365 aa21.33■■□□□ 1.01
SSH1-208ENST00000548522 IFT57Q9NWB7 429 aa21.33■■□□□ 1.01
SSH1-208ENST00000548522 GGA1Q9UJY5 639 aa21.33■■□□□ 1.01
SSH1-208ENST00000548522 WTIPA6NIX2 430 aaPredicted RBP21.32■■□□□ 1
SSH1-208ENST00000548522 PCCAP05165 728 aaPredicted RBP21.31■■□□□ 1
SSH1-208ENST00000548522 RGS19P49795 217 aa21.31■■□□□ 1
SSH1-208ENST00000548522 KIF23Q02241 960 aaPredicted RBP21.31■■□□□ 1
SSH1-208ENST00000548522 MLLT1Q03111 559 aaPredicted RBP21.31■■□□□ 1
SSH1-208ENST00000548522 CCDC152Q4G0S7 254 aa21.31■■□□□ 1
SSH1-208ENST00000548522 C2orf69Q8N8R5 385 aa21.31■■□□□ 1
SSH1-208ENST00000548522 CDCA5Q96FF9 252 aa21.31■■□□□ 1
SSH1-208ENST00000548522 ZNF157P51786 506 aaPredicted RBP21.3■■□□□ 1
SSH1-208ENST00000548522 ZNF280AP59817 542 aaPredicted RBP21.3■■□□□ 1
SSH1-208ENST00000548522 ANGEL2Q5VTE6 544 aaKnown RBP21.3■■□□□ 1
SSH1-208ENST00000548522 RSBN1LQ6PCB5 846 aaPredicted RBP21.3■■□□□ 1
SSH1-208ENST00000548522 SULF1Q8IWU6 871 aa21.3■■□□□ 1
SSH1-208ENST00000548522 CCDC191Q8NCU4 936 aa21.3■■□□□ 1
SSH1-208ENST00000548522 CWC25Q9NXE8 425 aaPredicted RBP21.3■■□□□ 1
SSH1-208ENST00000548522 SCAF8Q9UPN6 1271 aaKnown RBP21.3■■□□□ 1
SSH1-208ENST00000548522 ZNF609O15014 1411 aa21.29■■□□□ 1
SSH1-208ENST00000548522 PDE8AO60658 829 aa21.29■■□□□ 1
SSH1-208ENST00000548522 PRKRIP1Q9H875 184 aaPredicted RBP21.29■■□□□ 1
SSH1-208ENST00000548522 POLR2AP24928 1970 aaKnown RBP21.28■■□□□ 1
SSH1-208ENST00000548522 TNRC18O15417 2968 aaPredicted RBP21.28■■□□□ 1
SSH1-208ENST00000548522 G3V3G9 751 aa21.28■■□□□ 1
SSH1-208ENST00000548522 SLC10A3P09131 477 aa21.28■■□□□ 1
SSH1-208ENST00000548522 GNAI1P63096 354 aa21.28■■□□□ 1
SSH1-208ENST00000548522 SCARF1Q14162 830 aa21.28■■□□□ 1
SSH1-208ENST00000548522 DCAF8Q5TAQ9 597 aa21.28■■□□□ 1
SSH1-208ENST00000548522 TSPYL6Q8N831 410 aa21.28■■□□□ 1
SSH1-208ENST00000548522 GMLQ99445 158 aa21.28■■□□□ 1
SSH1-208ENST00000548522 METTL22Q9BUU2 404 aaPredicted RBP21.28■■□□□ 1
SSH1-208ENST00000548522 XDHP47989 1333 aa21.28■■□□□ 1
SSH1-208ENST00000548522 CCDC102AQ96A19 550 aa21.27■■□□□ 1
SSH1-208ENST00000548522 RNF186Q9NXI6 227 aa21.27■■□□□ 1
SSH1-208ENST00000548522 MAP3K2Q9Y2U5 619 aa21.27■■□□□ 1
SSH1-208ENST00000548522 TRPA1O75762 1119 aa21.26■□□□□ 0.99
SSH1-208ENST00000548522 IGKV5-2P06315 115 aa21.26■□□□□ 0.99
SSH1-208ENST00000548522 CTSWP56202 376 aa21.26■□□□□ 0.99
SSH1-208ENST00000548522 RASAL3Q86YV0 1011 aa21.26■□□□□ 0.99
SSH1-208ENST00000548522 ANKRD18AQ8IVF6 992 aa21.26■□□□□ 0.99
SSH1-208ENST00000548522 AGBL3Q8NEM8 1001 aa21.26■□□□□ 0.99
SSH1-208ENST00000548522 MXD3Q9BW11 206 aa21.26■□□□□ 0.99
SSH1-208ENST00000548522 SAGE1Q9NXZ1 904 aa21.26■□□□□ 0.99
SSH1-208ENST00000548522 MOB2Q70IA6 237 aa21.25■□□□□ 0.99
SSH1-208ENST00000548522 CSRNP1Q96S65 589 aa21.25■□□□□ 0.99
SSH1-208ENST00000548522 MYOZ2Q9NPC6 264 aa21.25■□□□□ 0.99
SSH1-208ENST00000548522 SLC34A2O95436 690 aa21.24■□□□□ 0.99
SSH1-208ENST00000548522 USP17L8P0C7I0 530 aa21.24■□□□□ 0.99
SSH1-208ENST00000548522 HSP90B1P14625 803 aaKnown RBP21.24■□□□□ 0.99
SSH1-208ENST00000548522 TSR2Q969E8 191 aaKnown RBP21.24■□□□□ 0.99
SSH1-208ENST00000548522 GREM2Q9H772 168 aa21.24■□□□□ 0.99
SSH1-208ENST00000548522 PSME4Q14997 1843 aa21.24■□□□□ 0.99
SSH1-208ENST00000548522 CALD1Q05682 793 aaKnown RBP21.23■□□□□ 0.99
SSH1-208ENST00000548522 CWF19L2Q2TBE0 894 aaKnown RBP21.23■□□□□ 0.99
SSH1-208ENST00000548522 PRAMEF18Q5VWM3 479 aa21.23■□□□□ 0.99
SSH1-208ENST00000548522 PI4KAP2A4QPH2 592 aa21.22■□□□□ 0.99
SSH1-208ENST00000548522 USP17L3A6NCW0 530 aa21.22■□□□□ 0.99
SSH1-208ENST00000548522 USP17L4A6NCW7 530 aa21.22■□□□□ 0.99
SSH1-208ENST00000548522 DDX58O95786 925 aaKnown RBP21.22■□□□□ 0.99
SSH1-208ENST00000548522 ATP2B4P23634 1241 aa21.22■□□□□ 0.99
SSH1-208ENST00000548522 CCDC30Q5VVM6 783 aa21.22■□□□□ 0.99
SSH1-208ENST00000548522 USP17L1Q7RTZ2 530 aa21.22■□□□□ 0.99
SSH1-208ENST00000548522 PI4KAP1Q8N8J0 262 aa21.22■□□□□ 0.99
SSH1-208ENST00000548522 TTLL11Q8NHH1 800 aa21.22■□□□□ 0.99
SSH1-208ENST00000548522 PAPPA2Q9BXP8 1791 aa21.22■□□□□ 0.99
SSH1-208ENST00000548522 MED23Q9ULK4 1368 aa21.22■□□□□ 0.99
SSH1-208ENST00000548522 ZNF646O15015 1829 aaPredicted RBP21.21■□□□□ 0.99
SSH1-208ENST00000548522 SPEF2Q9C093 1822 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms