RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 TMX4Q9H1E5 349 aaPredicted RBP21.67■■□□□ 1.06
HDAC7-227ENST00000548080 LRRFIP2Q9Y608 721 aaKnown RBP21.67■■□□□ 1.06
HDAC7-227ENST00000548080 LTBP3Q9NS15 1303 aa21.67■■□□□ 1.06
HDAC7-227ENST00000548080 DUOX1Q9NRD9 1551 aa21.66■■□□□ 1.06
HDAC7-227ENST00000548080 ANKRD18BA2A2Z9 1011 aa21.66■■□□□ 1.06
HDAC7-227ENST00000548080 CC2D2BQ6DHV5 1058 aa21.66■■□□□ 1.06
HDAC7-227ENST00000548080 DPP8Q6V1X1 898 aaPredicted RBP21.66■■□□□ 1.06
HDAC7-227ENST00000548080 MPNDQ8N594 471 aa21.66■■□□□ 1.06
HDAC7-227ENST00000548080 GPR101Q96P66 508 aaPredicted RBP21.66■■□□□ 1.06
HDAC7-227ENST00000548080 IFIT5Q13325 482 aaKnown RBP21.65■■□□□ 1.06
HDAC7-227ENST00000548080 NSFL1CQ9UNZ2 370 aaKnown RBP21.65■■□□□ 1.06
HDAC7-227ENST00000548080 DICER1Q9UPY3 1922 aaKnown RBP21.65■■□□□ 1.06
HDAC7-227ENST00000548080 COL4A5P29400 1685 aa21.65■■□□□ 1.06
HDAC7-227ENST00000548080 GNAI3P08754 354 aa21.64■■□□□ 1.06
HDAC7-227ENST00000548080 IGHMBP2P38935 993 aaKnown RBP21.64■■□□□ 1.06
HDAC7-227ENST00000548080 HDAC1Q13547 482 aaPredicted RBP21.64■■□□□ 1.06
HDAC7-227ENST00000548080 TMC4Q7Z404 712 aa21.64■■□□□ 1.06
HDAC7-227ENST00000548080 ZNF526Q8TF50 670 aaPredicted RBP21.64■■□□□ 1.06
HDAC7-227ENST00000548080 PSMD1Q99460 953 aa21.64■■□□□ 1.06
HDAC7-227ENST00000548080 C1orf115Q9H7X2 142 aa21.64■■□□□ 1.06
HDAC7-227ENST00000548080 WTIPA6NIX2 430 aaPredicted RBP21.64■■□□□ 1.05
HDAC7-227ENST00000548080 CCDC57Q2TAC2 916 aa21.64■■□□□ 1.05
HDAC7-227ENST00000548080 RABL6Q3YEC7 729 aaPredicted RBP21.64■■□□□ 1.05
HDAC7-227ENST00000548080 TAF7LQ5H9L4 462 aa21.64■■□□□ 1.05
HDAC7-227ENST00000548080 KLHDC4Q8TBB5 520 aa21.64■■□□□ 1.05
HDAC7-227ENST00000548080 LTBP1Q14766 1721 aa21.63■■□□□ 1.05
HDAC7-227ENST00000548080 IARSP41252 1262 aaKnown RBP21.63■■□□□ 1.05
HDAC7-227ENST00000548080 AOC3Q16853 763 aa21.63■■□□□ 1.05
HDAC7-227ENST00000548080 MPHOSPH8Q99549 860 aa21.63■■□□□ 1.05
HDAC7-227ENST00000548080 BSDC1Q9NW68 430 aaPredicted RBP21.63■■□□□ 1.05
HDAC7-227ENST00000548080 ANKIB1Q9P2G1 1089 aa21.63■■□□□ 1.05
HDAC7-227ENST00000548080 POLLQ9UGP5 575 aa21.62■■□□□ 1.05
HDAC7-227ENST00000548080 MINPP1Q9UNW1 487 aa21.62■■□□□ 1.05
HDAC7-227ENST00000548080 C6orf229H3BNL8 230 aa21.61■■□□□ 1.05
HDAC7-227ENST00000548080 GNAI2P04899 355 aa21.61■■□□□ 1.05
HDAC7-227ENST00000548080 HELBQ8NG08 1087 aaPredicted RBP21.61■■□□□ 1.05
HDAC7-227ENST00000548080 PUS3Q9BZE2 481 aaKnown RBP21.61■■□□□ 1.05
HDAC7-227ENST00000548080 A0A1B0GUL6 1792 aa21.6■■□□□ 1.05
HDAC7-227ENST00000548080 RIMBP2O15034 1052 aa21.6■■□□□ 1.05
HDAC7-227ENST00000548080 PPIP5K2O43314 1243 aa21.6■■□□□ 1.05
HDAC7-227ENST00000548080 UFL1O94874 794 aa21.59■■□□□ 1.05
HDAC7-227ENST00000548080 RPAP2Q8IXW5 612 aaPredicted RBP21.59■■□□□ 1.05
HDAC7-227ENST00000548080 LARGE2Q8N3Y3 721 aa21.59■■□□□ 1.05
HDAC7-227ENST00000548080 RTFDC1Q9BY42 306 aaPredicted RBP21.59■■□□□ 1.05
HDAC7-227ENST00000548080 SNAP23O00161 211 aa21.58■■□□□ 1.05
HDAC7-227ENST00000548080 GRIPAP1Q4V328 841 aa21.58■■□□□ 1.05
HDAC7-227ENST00000548080 LDHAL6AQ6ZMR3 332 aa21.58■■□□□ 1.05
HDAC7-227ENST00000548080 ZNF784Q8NCA9 323 aaPredicted RBP21.58■■□□□ 1.05
HDAC7-227ENST00000548080 TBC1D16Q8TBP0 767 aa21.58■■□□□ 1.05
HDAC7-227ENST00000548080 XDHP47989 1333 aa21.58■■□□□ 1.04
HDAC7-227ENST00000548080 TAF5LO75529 589 aa21.58■■□□□ 1.04
HDAC7-227ENST00000548080 CHRNDQ07001 517 aa21.58■■□□□ 1.04
HDAC7-227ENST00000548080 SIRT2Q8IXJ6 389 aa21.58■■□□□ 1.04
HDAC7-227ENST00000548080 CNNM1Q9NRU3 951 aa21.58■■□□□ 1.04
HDAC7-227ENST00000548080 GGA1Q9UJY5 639 aa21.58■■□□□ 1.04
HDAC7-227ENST00000548080 RFX5P48382 616 aaPredicted RBP21.57■■□□□ 1.04
HDAC7-227ENST00000548080 LRRC24Q50LG9 513 aa21.57■■□□□ 1.04
HDAC7-227ENST00000548080 CEP85Q6P2H3 762 aa21.57■■□□□ 1.04
HDAC7-227ENST00000548080 SUPT20HQ8NEM7 779 aa21.57■■□□□ 1.04
HDAC7-227ENST00000548080 PODXL2Q9NZ53 605 aa21.57■■□□□ 1.04
HDAC7-227ENST00000548080 ZNF541Q9H0D2 1346 aa21.56■■□□□ 1.04
HDAC7-227ENST00000548080 PA2G4Q9UQ80 394 aaKnown RBP21.56■■□□□ 1.04
HDAC7-227ENST00000548080 HDAC5Q9UQL6 1122 aa21.56■■□□□ 1.04
HDAC7-227ENST00000548080 KIAA2012Q0VF49 1180 aa21.55■■□□□ 1.04
HDAC7-227ENST00000548080 DOK7Q18PE1 504 aa21.55■■□□□ 1.04
HDAC7-227ENST00000548080 WASHC4Q2M389 1173 aa21.55■■□□□ 1.04
HDAC7-227ENST00000548080 SIL1Q9H173 461 aa21.55■■□□□ 1.04
HDAC7-227ENST00000548080 SMC5Q8IY18 1101 aa21.54■■□□□ 1.04
HDAC7-227ENST00000548080 NIM1KQ8IY84 436 aa21.54■■□□□ 1.04
HDAC7-227ENST00000548080 JDP2Q8WYK2 163 aa21.54■■□□□ 1.04
HDAC7-227ENST00000548080 DBNDD1Q9H9R9 158 aa21.54■■□□□ 1.04
HDAC7-227ENST00000548080 PNMA6EA0A0J9YXQ4 647 aa21.53■■□□□ 1.04
HDAC7-227ENST00000548080 KLRK1P26718 216 aa21.53■■□□□ 1.04
HDAC7-227ENST00000548080 PTPN12Q05209 780 aaKnown RBP21.53■■□□□ 1.04
HDAC7-227ENST00000548080 SRGAP3O43295 1099 aa21.52■■□□□ 1.04
HDAC7-227ENST00000548080 ATP2B4P23634 1241 aa21.52■■□□□ 1.04
HDAC7-227ENST00000548080 ATP8B2P98198 1209 aa21.52■■□□□ 1.04
HDAC7-227ENST00000548080 HMMRO75330 724 aa21.52■■□□□ 1.03
HDAC7-227ENST00000548080 DDNO94850 711 aaPredicted RBP21.52■■□□□ 1.03
HDAC7-227ENST00000548080 KCNJ4P48050 445 aa21.52■■□□□ 1.03
HDAC7-227ENST00000548080 TXNRD3Q86VQ6 643 aa21.52■■□□□ 1.03
HDAC7-227ENST00000548080 GCC1Q96CN9 775 aa21.52■■□□□ 1.03
HDAC7-227ENST00000548080 EYA3Q99504 573 aa21.52■■□□□ 1.03
HDAC7-227ENST00000548080 ANKRD2Q9GZV1 360 aa21.52■■□□□ 1.03
HDAC7-227ENST00000548080 RIPOR2Q9Y4F9 1068 aa21.52■■□□□ 1.03
HDAC7-227ENST00000548080 ZC3H12CQ9C0D7 883 aaKnown RBP21.51■■□□□ 1.03
HDAC7-227ENST00000548080 NMRK2Q9NPI5 230 aa21.51■■□□□ 1.03
HDAC7-227ENST00000548080 ZNF804BA4D1E1 1349 aa21.5■■□□□ 1.03
HDAC7-227ENST00000548080 ZC3H4Q9UPT8 1303 aaKnown RBP21.5■■□□□ 1.03
HDAC7-227ENST00000548080 YDJCA8MPS7 323 aa21.5■■□□□ 1.03
HDAC7-227ENST00000548080 FZD9O00144 591 aa21.5■■□□□ 1.03
HDAC7-227ENST00000548080 METTL24Q5JXM2 366 aa21.5■■□□□ 1.03
HDAC7-227ENST00000548080 GPBP1L1Q9HC44 474 aaPredicted RBP21.5■■□□□ 1.03
HDAC7-227ENST00000548080 GLTPD2A6NH11 291 aa21.49■■□□□ 1.03
HDAC7-227ENST00000548080 ECE2O60344 883 aa21.49■■□□□ 1.03
HDAC7-227ENST00000548080 MTX1Q13505 466 aa21.49■■□□□ 1.03
HDAC7-227ENST00000548080 DCTPP1Q9H773 170 aa21.49■■□□□ 1.03
HDAC7-227ENST00000548080 KCNQ5Q9NR82 932 aa21.49■■□□□ 1.03
HDAC7-227ENST00000548080 LEMD3Q9Y2U8 911 aa21.49■■□□□ 1.03
HDAC7-227ENST00000548080 GJA3Q9Y6H8 435 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms