RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 BABAM1Q9NWV8 329 aa7.97□□□□□ -1.13
SRGAP1-206ENST00000543397 STK25O00506 426 aa7.97□□□□□ -1.13
SRGAP1-206ENST00000543397 ZNF772Q68DY9 489 aaPredicted RBP7.97□□□□□ -1.13
SRGAP1-206ENST00000543397 CCP110O43303 1012 aa7.97□□□□□ -1.13
SRGAP1-206ENST00000543397 CBFA2T2O43439 604 aa7.97□□□□□ -1.13
SRGAP1-206ENST00000543397 POTEJP0CG39 1038 aa7.97□□□□□ -1.13
SRGAP1-206ENST00000543397 HCLS1P14317 486 aaPredicted RBP7.97□□□□□ -1.13
SRGAP1-206ENST00000543397 GNAQP50148 359 aa7.97□□□□□ -1.13
SRGAP1-206ENST00000543397 EIF5P55010 431 aaKnown RBP7.97□□□□□ -1.13
SRGAP1-206ENST00000543397 EIF6P56537 245 aaKnown RBP7.97□□□□□ -1.13
SRGAP1-206ENST00000543397 IFIT1BQ5T764 474 aaKnown RBP7.97□□□□□ -1.13
SRGAP1-206ENST00000543397 LARGE2Q8N3Y3 721 aa7.97□□□□□ -1.13
SRGAP1-206ENST00000543397 FLAD1Q8NFF5 587 aa7.97□□□□□ -1.13
SRGAP1-206ENST00000543397 PARD3Q8TEW0 1356 aa7.97□□□□□ -1.13
SRGAP1-206ENST00000543397 B4DLN1 442 aa7.96□□□□□ -1.13
SRGAP1-206ENST00000543397 MRPL12P52815 198 aaKnown RBP7.96□□□□□ -1.13
SRGAP1-206ENST00000543397 MCM9Q9NXL9 1143 aa7.96□□□□□ -1.13
SRGAP1-206ENST00000543397 ORC3Q9UBD5 711 aaPredicted RBP7.96□□□□□ -1.13
SRGAP1-206ENST00000543397 MAGI2Q86UL8 1455 aa7.96□□□□□ -1.13
SRGAP1-206ENST00000543397 hCG_2014768A0A024R1R8 64 aa7.96□□□□□ -1.13
SRGAP1-206ENST00000543397 VAMP4O75379 141 aa7.96□□□□□ -1.13
SRGAP1-206ENST00000543397 HOXB7P09629 217 aa7.96□□□□□ -1.13
SRGAP1-206ENST00000543397 IFNLR1Q8IU57 520 aaPredicted RBP7.96□□□□□ -1.13
SRGAP1-206ENST00000543397 TSPYL6Q8N831 410 aa7.96□□□□□ -1.13
SRGAP1-206ENST00000543397 RETREG2Q8NC44 543 aa7.96□□□□□ -1.13
SRGAP1-206ENST00000543397 PAG1Q9NWQ8 432 aa7.96□□□□□ -1.13
SRGAP1-206ENST00000543397 PZPP20742 1482 aa7.96□□□□□ -1.14
SRGAP1-206ENST00000543397 A1BGP04217 495 aa7.96□□□□□ -1.14
SRGAP1-206ENST00000543397 GNAT2P19087 354 aa7.96□□□□□ -1.14
SRGAP1-206ENST00000543397 TTC22Q5TAA0 569 aa7.96□□□□□ -1.14
SRGAP1-206ENST00000543397 CCDC191Q8NCU4 936 aa7.96□□□□□ -1.14
SRGAP1-206ENST00000543397 VTI1AQ96AJ9 217 aa7.96□□□□□ -1.14
SRGAP1-206ENST00000543397 TSG101Q99816 390 aa7.96□□□□□ -1.14
SRGAP1-206ENST00000543397 GGA1Q9UJY5 639 aa7.96□□□□□ -1.14
SRGAP1-206ENST00000543397 NBPF7P0C2Y1 421 aaPredicted RBP7.96□□□□□ -1.14
SRGAP1-206ENST00000543397 MCMDC2Q4G0Z9 681 aa7.96□□□□□ -1.14
SRGAP1-206ENST00000543397 DPP8Q6V1X1 898 aaPredicted RBP7.96□□□□□ -1.14
SRGAP1-206ENST00000543397 CALML4Q96GE6 196 aa7.96□□□□□ -1.14
SRGAP1-206ENST00000543397 SLC26A6Q9BXS9 759 aa7.96□□□□□ -1.14
SRGAP1-206ENST00000543397 ARGLU1Q9NWB6 273 aaPredicted RBP7.96□□□□□ -1.14
SRGAP1-206ENST00000543397 BIN2Q9UBW5 565 aaPredicted RBP7.96□□□□□ -1.14
SRGAP1-206ENST00000543397 JAG2Q9Y219 1238 aa7.96□□□□□ -1.14
SRGAP1-206ENST00000543397 LIG1P18858 919 aa7.96□□□□□ -1.14
SRGAP1-206ENST00000543397 MORC4Q8TE76 937 aa7.96□□□□□ -1.14
SRGAP1-206ENST00000543397 PDE8AO60658 829 aa7.95□□□□□ -1.14
SRGAP1-206ENST00000543397 NEBLO76041 1014 aa7.95□□□□□ -1.14
SRGAP1-206ENST00000543397 IL13P35225 146 aa7.95□□□□□ -1.14
SRGAP1-206ENST00000543397 PLS1Q14651 629 aa7.95□□□□□ -1.14
SRGAP1-206ENST00000543397 CC2D2BQ6DHV5 1058 aa7.95□□□□□ -1.14
SRGAP1-206ENST00000543397 DENND2AQ9ULE3 1009 aa7.95□□□□□ -1.14
SRGAP1-206ENST00000543397 ZBTB43O43298 467 aa7.95□□□□□ -1.14
SRGAP1-206ENST00000543397 RXRBP28702 533 aa7.95□□□□□ -1.14
SRGAP1-206ENST00000543397 UBA7P41226 1012 aa7.95□□□□□ -1.14
SRGAP1-206ENST00000543397 GPR162Q16538 588 aa7.95□□□□□ -1.14
SRGAP1-206ENST00000543397 TTC6Q86TZ1 520 aa7.95□□□□□ -1.14
SRGAP1-206ENST00000543397 SUPT20HQ8NEM7 779 aa7.95□□□□□ -1.14
SRGAP1-206ENST00000543397 ACBD3Q9H3P7 528 aa7.95□□□□□ -1.14
SRGAP1-206ENST00000543397 MRVI1Q9Y6F6 885 aa7.95□□□□□ -1.14
SRGAP1-206ENST00000543397 ERVV-2B6SEH9 535 aa7.95□□□□□ -1.14
SRGAP1-206ENST00000543397 PDE6BP35913 854 aa7.95□□□□□ -1.14
SRGAP1-206ENST00000543397 RAB11FIP4Q86YS3 637 aa7.95□□□□□ -1.14
SRGAP1-206ENST00000543397 MIGA1Q8NAN2 632 aa7.95□□□□□ -1.14
SRGAP1-206ENST00000543397 CCDC148Q8NFR7 591 aa7.95□□□□□ -1.14
SRGAP1-206ENST00000543397 ZNF408Q9H9D4 720 aa7.95□□□□□ -1.14
SRGAP1-206ENST00000543397 LGR6Q9HBX8 967 aa7.95□□□□□ -1.14
SRGAP1-206ENST00000543397 TARBP1Q13395 1621 aaKnown RBP7.95□□□□□ -1.14
SRGAP1-206ENST00000543397 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.95□□□□□ -1.14
SRGAP1-206ENST00000543397 KLF18A0A0U1RQI7 1052 aa7.95□□□□□ -1.14
SRGAP1-206ENST00000543397 SMTNL1A8MU46 457 aa7.95□□□□□ -1.14
SRGAP1-206ENST00000543397 IDEP14735 1019 aa7.95□□□□□ -1.14
SRGAP1-206ENST00000543397 ITGA6P23229 1130 aa7.95□□□□□ -1.14
SRGAP1-206ENST00000543397 PDE1AP54750 535 aa7.95□□□□□ -1.14
SRGAP1-206ENST00000543397 TBC1D9Q6ZT07 1266 aa7.95□□□□□ -1.14
SRGAP1-206ENST00000543397 CKAP2LQ8IYA6 745 aa7.95□□□□□ -1.14
SRGAP1-206ENST00000543397 METTL22Q9BUU2 404 aaPredicted RBP7.95□□□□□ -1.14
SRGAP1-206ENST00000543397 HIBADHP31937 336 aaKnown RBP7.94□□□□□ -1.14
SRGAP1-206ENST00000543397 HDAC1Q13547 482 aaPredicted RBP7.94□□□□□ -1.14
SRGAP1-206ENST00000543397 MAGEB6Q8N7X4 407 aa7.94□□□□□ -1.14
SRGAP1-206ENST00000543397 BRF1Q92994 677 aa7.94□□□□□ -1.14
SRGAP1-206ENST00000543397 ERICH4A6NGS2 130 aa7.94□□□□□ -1.14
SRGAP1-206ENST00000543397 STXBP4Q6ZWJ1 553 aa7.94□□□□□ -1.14
SRGAP1-206ENST00000543397 CCDC150Q8NCX0 1101 aa7.94□□□□□ -1.14
SRGAP1-206ENST00000543397 ZNF496Q96IT1 587 aaPredicted RBP7.94□□□□□ -1.14
SRGAP1-206ENST00000543397 BICC1Q9H694 974 aaKnown RBP7.94□□□□□ -1.14
SRGAP1-206ENST00000543397 EFCAB6Q5THR3 1501 aa7.94□□□□□ -1.14
SRGAP1-206ENST00000543397 PLEKHG1Q9ULL1 1385 aa7.94□□□□□ -1.14
SRGAP1-206ENST00000543397 MAP3K11Q16584 847 aa7.94□□□□□ -1.14
SRGAP1-206ENST00000543397 KLHL10Q6JEL2 608 aa7.94□□□□□ -1.14
SRGAP1-206ENST00000543397 MAST3O60307 1309 aa7.94□□□□□ -1.14
SRGAP1-206ENST00000543397 AMPD3Q01432 767 aa7.94□□□□□ -1.14
SRGAP1-206ENST00000543397 TFCP2Q12800 502 aa7.94□□□□□ -1.14
SRGAP1-206ENST00000543397 SPC24Q8NBT2 197 aa7.94□□□□□ -1.14
SRGAP1-206ENST00000543397 BEGAINQ9BUH8 593 aa7.94□□□□□ -1.14
SRGAP1-206ENST00000543397 SH2D4AQ9H788 454 aa7.94□□□□□ -1.14
SRGAP1-206ENST00000543397 RRP9O43818 475 aaKnown RBP7.94□□□□□ -1.14
SRGAP1-206ENST00000543397 FGFR1OPO95684 399 aaKnown RBP7.94□□□□□ -1.14
SRGAP1-206ENST00000543397 ALDH1B1P30837 517 aa7.94□□□□□ -1.14
SRGAP1-206ENST00000543397 RTN1Q16799 776 aa7.94□□□□□ -1.14
SRGAP1-206ENST00000543397 SMARCC2Q8TAQ2 1214 aa7.94□□□□□ -1.14
SRGAP1-206ENST00000543397 LARP6Q9BRS8 491 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms