RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 GPATCH3Q96I76 525 aa6.23□□□□□ -1.41
KDM3B-209ENST00000542866 PGBD1Q96JS3 809 aa6.23□□□□□ -1.41
KDM3B-209ENST00000542866 TRPC5Q9UL62 973 aaPredicted RBP6.23□□□□□ -1.41
KDM3B-209ENST00000542866 PA2G4Q9UQ80 394 aaKnown RBP6.23□□□□□ -1.41
KDM3B-209ENST00000542866 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.23□□□□□ -1.41
KDM3B-209ENST00000542866 CCDC171Q6TFL3 1326 aa6.23□□□□□ -1.41
KDM3B-209ENST00000542866 NWD1Q149M9 1564 aa6.23□□□□□ -1.41
KDM3B-209ENST00000542866 SLU7O95391 586 aaKnown RBP6.23□□□□□ -1.41
KDM3B-209ENST00000542866 HSP90AB4PQ58FF6 505 aa6.23□□□□□ -1.41
KDM3B-209ENST00000542866 C11orf57Q6ZUT1 292 aaPredicted RBP6.23□□□□□ -1.41
KDM3B-209ENST00000542866 AACSQ86V21 672 aa6.23□□□□□ -1.41
KDM3B-209ENST00000542866 ERCC4Q92889 916 aaPredicted RBP6.23□□□□□ -1.41
KDM3B-209ENST00000542866 GTF3C6Q969F1 213 aa6.23□□□□□ -1.41
KDM3B-209ENST00000542866 TIGD1Q96MW7 591 aa6.23□□□□□ -1.41
KDM3B-209ENST00000542866 TM6SF1Q9BZW5 370 aa6.23□□□□□ -1.41
KDM3B-209ENST00000542866 ECHDC1Q9NTX5 307 aa6.23□□□□□ -1.41
KDM3B-209ENST00000542866 OVOS2A0A0J9YW53 1432 aa6.22□□□□□ -1.41
KDM3B-209ENST00000542866 OVOS2Q6IE36 1432 aa6.22□□□□□ -1.41
KDM3B-209ENST00000542866 ELP1O95163 1332 aa6.22□□□□□ -1.41
KDM3B-209ENST00000542866 JAK2O60674 1132 aa6.22□□□□□ -1.41
KDM3B-209ENST00000542866 NMIQ13287 307 aaPredicted RBP6.22□□□□□ -1.41
KDM3B-209ENST00000542866 SF3B2Q13435 895 aaKnown RBP6.22□□□□□ -1.41
KDM3B-209ENST00000542866 NECTIN1Q15223 517 aa6.22□□□□□ -1.41
KDM3B-209ENST00000542866 ZNF772Q68DY9 489 aaPredicted RBP6.22□□□□□ -1.41
KDM3B-209ENST00000542866 ERO1AQ96HE7 468 aa6.22□□□□□ -1.41
KDM3B-209ENST00000542866 CARD10Q9BWT7 1032 aa6.22□□□□□ -1.41
KDM3B-209ENST00000542866 QTRT2Q9H974 415 aaKnown RBP6.22□□□□□ -1.41
KDM3B-209ENST00000542866 TMOD3Q9NYL9 352 aa6.22□□□□□ -1.41
KDM3B-209ENST00000542866 AXIN2Q9Y2T1 843 aa6.22□□□□□ -1.41
KDM3B-209ENST00000542866 CHD2O14647 1828 aaKnown RBP6.22□□□□□ -1.41
KDM3B-209ENST00000542866 PI4KAP2A4QPH2 592 aa6.22□□□□□ -1.41
KDM3B-209ENST00000542866 SLC27A2O14975 620 aa6.22□□□□□ -1.41
KDM3B-209ENST00000542866 HTATSF1O43719 755 aaKnown RBP6.22□□□□□ -1.41
KDM3B-209ENST00000542866 PPFIA3O75145 1194 aa6.22□□□□□ -1.41
KDM3B-209ENST00000542866 IRX5P78411 483 aaPredicted RBP6.22□□□□□ -1.41
KDM3B-209ENST00000542866 POLA2Q14181 598 aa6.22□□□□□ -1.41
KDM3B-209ENST00000542866 ERCC6LQ2NKX8 1250 aa6.22□□□□□ -1.41
KDM3B-209ENST00000542866 RNF20Q5VTR2 975 aa6.22□□□□□ -1.41
KDM3B-209ENST00000542866 PI4KAP1Q8N8J0 262 aa6.22□□□□□ -1.41
KDM3B-209ENST00000542866 NOL10Q9BSC4 688 aaKnown RBP6.22□□□□□ -1.41
KDM3B-209ENST00000542866 CCDC8Q9H0W5 538 aaPredicted RBP6.22□□□□□ -1.41
KDM3B-209ENST00000542866 BTBD11A6QL63 1104 aa6.21□□□□□ -1.41
KDM3B-209ENST00000542866 RBM6P78332 1123 aaKnown RBP6.21□□□□□ -1.41
KDM3B-209ENST00000542866 CCAR1Q8IX12 1150 aaKnown RBP6.21□□□□□ -1.41
KDM3B-209ENST00000542866 BRF1Q92994 677 aa6.21□□□□□ -1.41
KDM3B-209ENST00000542866 FSD1Q9BTV5 496 aa6.21□□□□□ -1.41
KDM3B-209ENST00000542866 BOLA2Q9H3K6 86 aa6.21□□□□□ -1.41
KDM3B-209ENST00000542866 C9orf78Q9NZ63 289 aaPredicted RBP6.21□□□□□ -1.41
KDM3B-209ENST00000542866 AFF2P51816 1311 aa6.21□□□□□ -1.41
KDM3B-209ENST00000542866 NEMFO60524 1076 aa6.21□□□□□ -1.42
KDM3B-209ENST00000542866 SNW1Q13573 536 aaKnown RBP6.21□□□□□ -1.42
KDM3B-209ENST00000542866 ANKRD1Q15327 319 aa6.21□□□□□ -1.42
KDM3B-209ENST00000542866 ZRSR1Q15695 479 aaKnown RBP6.21□□□□□ -1.42
KDM3B-209ENST00000542866 AKAP4Q5JQC9 854 aa6.21□□□□□ -1.42
KDM3B-209ENST00000542866 HOMER1Q86YM7 354 aa6.21□□□□□ -1.42
KDM3B-209ENST00000542866 EVI5LQ96CN4 794 aa6.21□□□□□ -1.42
KDM3B-209ENST00000542866 FMNL2Q96PY5 1086 aa6.21□□□□□ -1.42
KDM3B-209ENST00000542866 TAF6LQ9Y6J9 622 aa6.21□□□□□ -1.42
KDM3B-209ENST00000542866 TTC41PQ6P2S7 1318 aa6.21□□□□□ -1.42
KDM3B-209ENST00000542866 PCDH11XQ9BZA7 1347 aa6.21□□□□□ -1.42
KDM3B-209ENST00000542866 PCDH11YQ9BZA8 1340 aa6.21□□□□□ -1.42
KDM3B-209ENST00000542866 POLR3GO15318 223 aaPredicted RBP6.21□□□□□ -1.42
KDM3B-209ENST00000542866 BMS1Q14692 1282 aaKnown RBP6.21□□□□□ -1.42
KDM3B-209ENST00000542866 STX1AQ16623 288 aa6.21□□□□□ -1.42
KDM3B-209ENST00000542866 SYT10Q6XYQ8 523 aa6.21□□□□□ -1.42
KDM3B-209ENST00000542866 CCDC73Q6ZRK6 1079 aa6.21□□□□□ -1.42
KDM3B-209ENST00000542866 CCAR2Q8N163 923 aaKnown RBP6.21□□□□□ -1.42
KDM3B-209ENST00000542866 AOPEPQ8N6M6 819 aa6.21□□□□□ -1.42
KDM3B-209ENST00000542866 CALCOCO1Q9P1Z2 691 aa6.21□□□□□ -1.42
KDM3B-209ENST00000542866 KINO60870 393 aaKnown RBP6.2□□□□□ -1.42
KDM3B-209ENST00000542866 SMC2O95347 1197 aa6.2□□□□□ -1.42
KDM3B-209ENST00000542866 IQCB1Q15051 598 aa6.2□□□□□ -1.42
KDM3B-209ENST00000542866 IL17REQ8NFR9 667 aa6.2□□□□□ -1.42
KDM3B-209ENST00000542866 DNAAF4Q8WXU2 420 aa6.2□□□□□ -1.42
KDM3B-209ENST00000542866 LRRC2Q9BYS8 371 aa6.2□□□□□ -1.42
KDM3B-209ENST00000542866 FTOQ9C0B1 505 aaKnown RBP eCLIP6.2□□□□□ -1.42
KDM3B-209ENST00000542866 CFAP45Q9UL16 551 aa6.2□□□□□ -1.42
KDM3B-209ENST00000542866 IGSF1Q8N6C5 1336 aa6.2□□□□□ -1.42
KDM3B-209ENST00000542866 PTCD1O75127 700 aaKnown RBP6.2□□□□□ -1.42
KDM3B-209ENST00000542866 HMGB1P09429 215 aaKnown RBP6.2□□□□□ -1.42
KDM3B-209ENST00000542866 RPS6KB1P23443 525 aa6.2□□□□□ -1.42
KDM3B-209ENST00000542866 CDC25BP30305 580 aa6.2□□□□□ -1.42
KDM3B-209ENST00000542866 NYAP1Q6ZVC0 841 aa6.2□□□□□ -1.42
KDM3B-209ENST00000542866 RGS22Q8NE09 1264 aa6.2□□□□□ -1.42
KDM3B-209ENST00000542866 MAP4K1Q92918 833 aa6.2□□□□□ -1.42
KDM3B-209ENST00000542866 MRFAP1L1Q96HT8 127 aa6.2□□□□□ -1.42
KDM3B-209ENST00000542866 SIL1Q9H173 461 aa6.2□□□□□ -1.42
KDM3B-209ENST00000542866 CHPF2Q9P2E5 772 aa6.2□□□□□ -1.42
KDM3B-209ENST00000542866 A0A0D9SFI3 127 aa6.2□□□□□ -1.42
KDM3B-209ENST00000542866 CAVIN2O95810 425 aa6.2□□□□□ -1.42
KDM3B-209ENST00000542866 CCZ1BP86790 482 aa6.2□□□□□ -1.42
KDM3B-209ENST00000542866 CCZ1P86791 482 aaPredicted RBP6.2□□□□□ -1.42
KDM3B-209ENST00000542866 GUCY1B3Q02153 619 aa6.2□□□□□ -1.42
KDM3B-209ENST00000542866 TOB2Q14106 344 aaPredicted RBP6.2□□□□□ -1.42
KDM3B-209ENST00000542866 RBM43Q6ZSC3 357 aaKnown RBP6.2□□□□□ -1.42
KDM3B-209ENST00000542866 TICAM2Q86XR7 235 aa6.2□□□□□ -1.42
KDM3B-209ENST00000542866 DCAF5Q96JK2 942 aa6.2□□□□□ -1.42
KDM3B-209ENST00000542866 SDF4Q9BRK5 362 aa6.2□□□□□ -1.42
KDM3B-209ENST00000542866 MAP3K5Q99683 1374 aa6.2□□□□□ -1.42
KDM3B-209ENST00000542866 ITSN1Q15811 1721 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms