RNA–Protein interactions for RNA: ENST00000542018.5

RAP1B-227, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-227ENST00000542018 LMOD3Q0VAK6 560 aa24.66■■□□□ 1.54
RAP1B-227ENST00000542018 C2orf69Q8N8R5 385 aa24.66■■□□□ 1.54
RAP1B-227ENST00000542018 RNF186Q9NXI6 227 aa24.66■■□□□ 1.54
RAP1B-227ENST00000542018 VIL1P09327 827 aaKnown RBP24.65■■□□□ 1.54
RAP1B-227ENST00000542018 ZNF157P51786 506 aaPredicted RBP24.65■■□□□ 1.54
RAP1B-227ENST00000542018 KIF4BQ2VIQ3 1234 aa24.65■■□□□ 1.54
RAP1B-227ENST00000542018 CCDC102AQ96A19 550 aa24.65■■□□□ 1.54
RAP1B-227ENST00000542018 DCPSQ96C86 337 aaKnown RBP24.65■■□□□ 1.54
RAP1B-227ENST00000542018 SLC10A3P09131 477 aa24.64■■□□□ 1.54
RAP1B-227ENST00000542018 NEUROD2Q15784 382 aa24.64■■□□□ 1.54
RAP1B-227ENST00000542018 HDGFL1Q5TGJ6 251 aa24.64■■□□□ 1.54
RAP1B-227ENST00000542018 CCDC146Q8IYE0 955 aa24.64■■□□□ 1.54
RAP1B-227ENST00000542018 CSRNP1Q96S65 589 aa24.64■■□□□ 1.54
RAP1B-227ENST00000542018 GGA3Q9NZ52 723 aa24.64■■□□□ 1.54
RAP1B-227ENST00000542018 PSME4Q14997 1843 aa24.63■■□□□ 1.53
RAP1B-227ENST00000542018 IRS4O14654 1257 aaPredicted RBP24.63■■□□□ 1.53
RAP1B-227ENST00000542018 TRPA1O75762 1119 aa24.63■■□□□ 1.53
RAP1B-227ENST00000542018 RPS8P62241 208 aaKnown RBP24.63■■□□□ 1.53
RAP1B-227ENST00000542018 TRIM28Q13263 835 aaKnown RBP24.63■■□□□ 1.53
RAP1B-227ENST00000542018 PODXL2Q9NZ53 605 aa24.63■■□□□ 1.53
RAP1B-227ENST00000542018 EYA3Q99504 573 aa24.62■■□□□ 1.53
RAP1B-227ENST00000542018 SEC31BQ9NQW1 1179 aa24.62■■□□□ 1.53
RAP1B-227ENST00000542018 LAS1LQ9Y4W2 734 aaKnown RBP24.62■■□□□ 1.53
RAP1B-227ENST00000542018 CDCA5Q96FF9 252 aa24.61■■□□□ 1.53
RAP1B-227ENST00000542018 DBF4Q9UBU7 674 aaPredicted RBP24.61■■□□□ 1.53
RAP1B-227ENST00000542018 ZNF609O15014 1411 aa24.61■■□□□ 1.53
RAP1B-227ENST00000542018 HOXB7P09629 217 aa24.6■■□□□ 1.53
RAP1B-227ENST00000542018 SOX10P56693 466 aa24.6■■□□□ 1.53
RAP1B-227ENST00000542018 ZNF280AP59817 542 aaPredicted RBP24.59■■□□□ 1.53
RAP1B-227ENST00000542018 SULF1Q8IWU6 871 aa24.59■■□□□ 1.53
RAP1B-227ENST00000542018 ZC3H12CQ9C0D7 883 aaKnown RBP24.59■■□□□ 1.53
RAP1B-227ENST00000542018 RASAL3Q86YV0 1011 aa24.58■■□□□ 1.53
RAP1B-227ENST00000542018 GMLQ99445 158 aa24.58■■□□□ 1.53
RAP1B-227ENST00000542018 UFL1O94874 794 aa24.57■■□□□ 1.52
RAP1B-227ENST00000542018 ZEB1P37275 1124 aaPredicted RBP24.57■■□□□ 1.52
RAP1B-227ENST00000542018 SCARF1Q14162 830 aa24.57■■□□□ 1.52
RAP1B-227ENST00000542018 ANGEL2Q5VTE6 544 aaKnown RBP24.57■■□□□ 1.52
RAP1B-227ENST00000542018 ZBTB38Q8NAP3 1195 aaPredicted RBP24.57■■□□□ 1.52
RAP1B-227ENST00000542018 HYPKQ9NX55 129 aa24.57■■□□□ 1.52
RAP1B-227ENST00000542018 RALBP1Q15311 655 aa24.56■■□□□ 1.52
RAP1B-227ENST00000542018 DUSP27Q5VZP5 1158 aa24.56■■□□□ 1.52
RAP1B-227ENST00000542018 RSBN1LQ6PCB5 846 aaPredicted RBP24.56■■□□□ 1.52
RAP1B-227ENST00000542018 PAPPA2Q9BXP8 1791 aa24.55■■□□□ 1.52
RAP1B-227ENST00000542018 SCAF8Q9UPN6 1271 aaKnown RBP24.55■■□□□ 1.52
RAP1B-227ENST00000542018 ZNF646O15015 1829 aaPredicted RBP24.55■■□□□ 1.52
RAP1B-227ENST00000542018 WTIPA6NIX2 430 aaPredicted RBP24.54■■□□□ 1.52
RAP1B-227ENST00000542018 AGBL3Q8NEM8 1001 aa24.54■■□□□ 1.52
RAP1B-227ENST00000542018 RUNDC1Q96C34 613 aa24.54■■□□□ 1.52
RAP1B-227ENST00000542018 PHAXQ9H814 394 aaKnown RBP24.54■■□□□ 1.52
RAP1B-227ENST00000542018 PCDH10Q9P2E7 1040 aa24.54■■□□□ 1.52
RAP1B-227ENST00000542018 GGA1Q9UJY5 639 aa24.54■■□□□ 1.52
RAP1B-227ENST00000542018 MOB2Q70IA6 237 aa24.53■■□□□ 1.52
RAP1B-227ENST00000542018 JARID2Q92833 1246 aaPredicted RBP24.53■■□□□ 1.52
RAP1B-227ENST00000542018 MBIPQ9NS73 344 aa24.53■■□□□ 1.52
RAP1B-227ENST00000542018 ANKIB1Q9P2G1 1089 aa24.53■■□□□ 1.52
RAP1B-227ENST00000542018 CTU1Q7Z7A3 348 aaKnown RBP24.52■■□□□ 1.52
RAP1B-227ENST00000542018 RIC3Q7Z5B4 369 aa24.51■■□□□ 1.51
RAP1B-227ENST00000542018 CCDC85AQ96PX6 553 aaPredicted RBP24.51■■□□□ 1.51
RAP1B-227ENST00000542018 MYOZ2Q9NPC6 264 aa24.51■■□□□ 1.51
RAP1B-227ENST00000542018 ZNF853P0CG23 659 aa24.5■■□□□ 1.51
RAP1B-227ENST00000542018 MYD88Q99836 296 aa24.5■■□□□ 1.51
RAP1B-227ENST00000542018 PDE8AO60658 829 aa24.49■■□□□ 1.51
RAP1B-227ENST00000542018 PCCAP05165 728 aaPredicted RBP24.49■■□□□ 1.51
RAP1B-227ENST00000542018 USP17L8P0C7I0 530 aa24.49■■□□□ 1.51
RAP1B-227ENST00000542018 FKBP1BP68106 108 aa24.49■■□□□ 1.51
RAP1B-227ENST00000542018 PRAMEF18Q5VWM3 479 aa24.49■■□□□ 1.51
RAP1B-227ENST00000542018 REM2Q8IYK8 340 aaPredicted RBP24.49■■□□□ 1.51
RAP1B-227ENST00000542018 ADAMTS8Q9UP79 889 aa24.49■■□□□ 1.51
RAP1B-227ENST00000542018 PITPNM2Q9BZ72 1349 aa24.49■■□□□ 1.51
RAP1B-227ENST00000542018 G3V3G9 751 aa24.48■■□□□ 1.51
RAP1B-227ENST00000542018 CCDC152Q4G0S7 254 aa24.48■■□□□ 1.51
RAP1B-227ENST00000542018 DCAF8Q5TAQ9 597 aa24.48■■□□□ 1.51
RAP1B-227ENST00000542018 CCDC191Q8NCU4 936 aa24.48■■□□□ 1.51
RAP1B-227ENST00000542018 MYBBP1AQ9BQG0 1328 aaKnown RBP24.48■■□□□ 1.51
RAP1B-227ENST00000542018 HPS5Q9UPZ3 1129 aa24.48■■□□□ 1.51
RAP1B-227ENST00000542018 XDHP47989 1333 aa24.47■■□□□ 1.51
RAP1B-227ENST00000542018 USP17L3A6NCW0 530 aa24.47■■□□□ 1.51
RAP1B-227ENST00000542018 USP17L4A6NCW7 530 aa24.47■■□□□ 1.51
RAP1B-227ENST00000542018 UBE2Q2LH0YL09 131 aa24.47■■□□□ 1.51
RAP1B-227ENST00000542018 GOLGA2Q08379 1002 aa24.47■■□□□ 1.51
RAP1B-227ENST00000542018 USP17L1Q7RTZ2 530 aa24.47■■□□□ 1.51
RAP1B-227ENST00000542018 NBPF9Q3BBW0 867 aa24.46■■□□□ 1.51
RAP1B-227ENST00000542018 MXD3Q9BW11 206 aa24.46■■□□□ 1.51
RAP1B-227ENST00000542018 SPEF2Q9C093 1822 aa24.46■■□□□ 1.51
RAP1B-227ENST00000542018 TBC1D8O95759 1140 aa24.45■■□□□ 1.5
RAP1B-227ENST00000542018 PODNQ7Z5L7 613 aa24.45■■□□□ 1.5
RAP1B-227ENST00000542018 ZNF296Q8WUU4 475 aaPredicted RBP24.45■■□□□ 1.5
RAP1B-227ENST00000542018 ELL2O00472 640 aaPredicted RBP24.44■■□□□ 1.5
RAP1B-227ENST00000542018 ATP2B4P23634 1241 aa24.44■■□□□ 1.5
RAP1B-227ENST00000542018 ANKRD18AQ8IVF6 992 aa24.44■■□□□ 1.5
RAP1B-227ENST00000542018 CWC25Q9NXE8 425 aaPredicted RBP24.44■■□□□ 1.5
RAP1B-227ENST00000542018 HSP90B1P14625 803 aaKnown RBP24.43■■□□□ 1.5
RAP1B-227ENST00000542018 DACT2Q5SW24 774 aa24.43■■□□□ 1.5
RAP1B-227ENST00000542018 METTL22Q9BUU2 404 aaPredicted RBP24.43■■□□□ 1.5
RAP1B-227ENST00000542018 HTTP42858 3142 aa24.43■■□□□ 1.5
RAP1B-227ENST00000542018 MKI67P46013 3256 aaKnown RBP24.43■■□□□ 1.5
RAP1B-227ENST00000542018 MYH3P11055 1940 aa24.42■■□□□ 1.5
RAP1B-227ENST00000542018 TM4SF4P48230 202 aa24.42■■□□□ 1.5
RAP1B-227ENST00000542018 C8orf58Q8NAV2 365 aa24.42■■□□□ 1.5
RAP1B-227ENST00000542018 MED23Q9ULK4 1368 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms