RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 PRR14Q9BWN1 585 aa9.72□□□□□ -0.85
AC005840.3-201ENST00000541888 ZBTB3Q9H5J0 574 aa9.72□□□□□ -0.85
AC005840.3-201ENST00000541888 DDX21Q9NR30 783 aaKnown RBP eCLIP9.72□□□□□ -0.85
AC005840.3-201ENST00000541888 DAXXQ9UER7 740 aaPredicted RBP9.72□□□□□ -0.85
AC005840.3-201ENST00000541888 ATP5J2-PTCD1G3V325 749 aa9.71□□□□□ -0.85
AC005840.3-201ENST00000541888 APBB1O00213 710 aa9.71□□□□□ -0.85
AC005840.3-201ENST00000541888 NBPF7P0C2Y1 421 aaPredicted RBP9.71□□□□□ -0.85
AC005840.3-201ENST00000541888 COPS2P61201 443 aa9.71□□□□□ -0.85
AC005840.3-201ENST00000541888 MAP2K5Q13163 448 aa9.71□□□□□ -0.85
AC005840.3-201ENST00000541888 PALLDQ8WX93 1383 aa9.7□□□□□ -0.86
AC005840.3-201ENST00000541888 MS4A1P11836 297 aa9.7□□□□□ -0.86
AC005840.3-201ENST00000541888 ITPK1Q13572 414 aa9.7□□□□□ -0.86
AC005840.3-201ENST00000541888 RIC3Q7Z5B4 369 aa9.7□□□□□ -0.86
AC005840.3-201ENST00000541888 DNAAF4Q8WXU2 420 aa9.7□□□□□ -0.86
AC005840.3-201ENST00000541888 RGS17Q9UGC6 210 aaPredicted RBP9.7□□□□□ -0.86
AC005840.3-201ENST00000541888 ZBTB1Q9Y2K1 713 aa9.7□□□□□ -0.86
AC005840.3-201ENST00000541888 NUP188Q5SRE5 1749 aa9.7□□□□□ -0.86
AC005840.3-201ENST00000541888 IRF6O14896 467 aa9.7□□□□□ -0.86
AC005840.3-201ENST00000541888 RGS20O76081 388 aa9.7□□□□□ -0.86
AC005840.3-201ENST00000541888 CFHP08603 1231 aa9.7□□□□□ -0.86
AC005840.3-201ENST00000541888 ATP6V1AP38606 617 aa9.7□□□□□ -0.86
AC005840.3-201ENST00000541888 MYD88Q99836 296 aa9.7□□□□□ -0.86
AC005840.3-201ENST00000541888 HYPKQ9NX55 129 aa9.7□□□□□ -0.86
AC005840.3-201ENST00000541888 PCDHB3Q9Y5E6 796 aa9.7□□□□□ -0.86
AC005840.3-201ENST00000541888 BEND3Q5T5X7 828 aa9.69□□□□□ -0.86
AC005840.3-201ENST00000541888 USP44Q9H0E7 712 aa9.69□□□□□ -0.86
AC005840.3-201ENST00000541888 LRRFIP2Q9Y608 721 aaKnown RBP9.69□□□□□ -0.86
AC005840.3-201ENST00000541888 NHSQ6T4R5 1651 aa9.69□□□□□ -0.86
AC005840.3-201ENST00000541888 ATP10DQ9P241 1426 aa9.69□□□□□ -0.86
AC005840.3-201ENST00000541888 SOS1Q07889 1333 aaPredicted RBP9.69□□□□□ -0.86
AC005840.3-201ENST00000541888 LOC102724428A0A0B4J2F2 783 aa9.68□□□□□ -0.86
AC005840.3-201ENST00000541888 ACTN4O43707 911 aaKnown RBP9.68□□□□□ -0.86
AC005840.3-201ENST00000541888 IGKV5-2P06315 115 aa9.68□□□□□ -0.86
AC005840.3-201ENST00000541888 CYP19A1P11511 503 aaPredicted RBP9.68□□□□□ -0.86
AC005840.3-201ENST00000541888 SIK1P57059 783 aa9.68□□□□□ -0.86
AC005840.3-201ENST00000541888 KMT5BQ4FZB7 885 aa9.68□□□□□ -0.86
AC005840.3-201ENST00000541888 POTEAQ6S8J7 498 aa9.68□□□□□ -0.86
AC005840.3-201ENST00000541888 KSR2Q6VAB6 950 aa9.68□□□□□ -0.86
AC005840.3-201ENST00000541888 CENPQQ7L2Z9 268 aaPredicted RBP9.68□□□□□ -0.86
AC005840.3-201ENST00000541888 SRCIN1Q9C0H9 1055 aa9.68□□□□□ -0.86
AC005840.3-201ENST00000541888 PNMA6EA0A0J9YXQ4 647 aa9.68□□□□□ -0.86
AC005840.3-201ENST00000541888 TRIM37O94972 964 aa9.68□□□□□ -0.86
AC005840.3-201ENST00000541888 CCT4P50991 539 aaKnown RBP9.68□□□□□ -0.86
AC005840.3-201ENST00000541888 AMIGO3Q86WK7 504 aa9.68□□□□□ -0.86
AC005840.3-201ENST00000541888 TBC1D2BQ9UPU7 963 aa9.68□□□□□ -0.86
AC005840.3-201ENST00000541888 COL5A3P25940 1745 aaPredicted RBP9.67□□□□□ -0.86
AC005840.3-201ENST00000541888 CRKLP46109 303 aaKnown RBP9.67□□□□□ -0.86
AC005840.3-201ENST00000541888 CEP85Q6P2H3 762 aa9.67□□□□□ -0.86
AC005840.3-201ENST00000541888 BLOC1S3Q6QNY0 202 aa9.67□□□□□ -0.86
AC005840.3-201ENST00000541888 LINC00116Q8NCU8 138 aa9.67□□□□□ -0.86
AC005840.3-201ENST00000541888 NKX2-3Q8TAU0 364 aa9.67□□□□□ -0.86
AC005840.3-201ENST00000541888 FBXO41Q8TF61 875 aa9.67□□□□□ -0.86
AC005840.3-201ENST00000541888 NUP98P52948 1817 aa9.66□□□□□ -0.86
AC005840.3-201ENST00000541888 PXDNLA1KZ92 1463 aa9.66□□□□□ -0.86
AC005840.3-201ENST00000541888 ZPR1O75312 459 aa9.66□□□□□ -0.86
AC005840.3-201ENST00000541888 HLFQ16534 295 aa9.66□□□□□ -0.86
AC005840.3-201ENST00000541888 KRT27Q7Z3Y8 459 aa9.66□□□□□ -0.86
AC005840.3-201ENST00000541888 PDZRN3Q9UPQ7 1066 aa9.66□□□□□ -0.86
AC005840.3-201ENST00000541888 FAM177BA6PVY3 158 aa9.66□□□□□ -0.86
AC005840.3-201ENST00000541888 DDX11L8A8MPP1 907 aa9.66□□□□□ -0.86
AC005840.3-201ENST00000541888 SMARCA5O60264 1052 aaPredicted RBP9.66□□□□□ -0.86
AC005840.3-201ENST00000541888 UBTFL1P0CB47 393 aaPredicted RBP9.66□□□□□ -0.86
AC005840.3-201ENST00000541888 GPTP24298 496 aa9.66□□□□□ -0.86
AC005840.3-201ENST00000541888 SYNE4Q8N205 404 aa9.66□□□□□ -0.86
AC005840.3-201ENST00000541888 LNPKQ9C0E8 428 aa9.66□□□□□ -0.86
AC005840.3-201ENST00000541888 RWDD1Q9H446 243 aaPredicted RBP9.66□□□□□ -0.86
AC005840.3-201ENST00000541888 TAF1LQ8IZX4 1826 aa9.65□□□□□ -0.86
AC005840.3-201ENST00000541888 NEURL1BA8MQ27 555 aa9.65□□□□□ -0.86
AC005840.3-201ENST00000541888 STARD3NLO95772 234 aa9.65□□□□□ -0.86
AC005840.3-201ENST00000541888 DDX58O95786 925 aaKnown RBP9.65□□□□□ -0.86
AC005840.3-201ENST00000541888 DEKP35659 375 aaKnown RBP9.65□□□□□ -0.86
AC005840.3-201ENST00000541888 INTS5Q6P9B9 1019 aaKnown RBP9.65□□□□□ -0.86
AC005840.3-201ENST00000541888 RDH13Q8NBN7 331 aa9.65□□□□□ -0.86
AC005840.3-201ENST00000541888 C9orf78Q9NZ63 289 aaPredicted RBP9.65□□□□□ -0.86
AC005840.3-201ENST00000541888 EXOC6BQ9Y2D4 811 aa9.65□□□□□ -0.86
AC005840.3-201ENST00000541888 GNAI2P04899 355 aa9.64□□□□□ -0.87
AC005840.3-201ENST00000541888 EPHA10Q5JZY3 1008 aa9.64□□□□□ -0.87
AC005840.3-201ENST00000541888 UBE3BQ7Z3V4 1068 aa9.64□□□□□ -0.87
AC005840.3-201ENST00000541888 KLHDC4Q8TBB5 520 aa9.64□□□□□ -0.87
AC005840.3-201ENST00000541888 SUCLG2Q96I99 432 aa9.64□□□□□ -0.87
AC005840.3-201ENST00000541888 METTL22Q9BUU2 404 aaPredicted RBP9.64□□□□□ -0.87
AC005840.3-201ENST00000541888 SRCAPQ6ZRS2 3230 aa9.64□□□□□ -0.87
AC005840.3-201ENST00000541888 LY75O60449 1722 aa9.64□□□□□ -0.87
AC005840.3-201ENST00000541888 RBM6P78332 1123 aaKnown RBP9.63□□□□□ -0.87
AC005840.3-201ENST00000541888 HDAC1Q13547 482 aaPredicted RBP9.63□□□□□ -0.87
AC005840.3-201ENST00000541888 ANKRD45Q5TZF3 282 aa9.63□□□□□ -0.87
AC005840.3-201ENST00000541888 ZNF772Q68DY9 489 aaPredicted RBP9.63□□□□□ -0.87
AC005840.3-201ENST00000541888 PPP1R18Q6NYC8 613 aa9.63□□□□□ -0.87
AC005840.3-201ENST00000541888 ANKRD44Q8N8A2 993 aa9.63□□□□□ -0.87
AC005840.3-201ENST00000541888 PLBD2Q8NHP8 589 aa9.63□□□□□ -0.87
AC005840.3-201ENST00000541888 CCDC102AQ96A19 550 aa9.63□□□□□ -0.87
AC005840.3-201ENST00000541888 KAZALD1Q96I82 304 aa9.63□□□□□ -0.87
AC005840.3-201ENST00000541888 CCDC85AQ96PX6 553 aaPredicted RBP9.63□□□□□ -0.87
AC005840.3-201ENST00000541888 LRRC4BQ9NT99 713 aa9.63□□□□□ -0.87
AC005840.3-201ENST00000541888 RXRBP28702 533 aa9.63□□□□□ -0.87
AC005840.3-201ENST00000541888 NEXNQ0ZGT2 675 aa9.63□□□□□ -0.87
AC005840.3-201ENST00000541888 GCKRQ14397 625 aa9.63□□□□□ -0.87
AC005840.3-201ENST00000541888 DZIP3Q86Y13 1208 aaKnown RBP9.63□□□□□ -0.87
AC005840.3-201ENST00000541888 C16orf71Q8IYS4 520 aaPredicted RBP9.63□□□□□ -0.87
AC005840.3-201ENST00000541888 LINS1Q8NG48 757 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms