RNA–Protein interactions for RNA: ENST00000540301.1

KLHL42-203, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-203ENST00000540301 U2SURPO15042 1029 aaKnown RBP10.94□□□□□ -0.66
KLHL42-203ENST00000540301 VIL1P09327 827 aaKnown RBP10.94□□□□□ -0.66
KLHL42-203ENST00000540301 ZNF280AP59817 542 aaPredicted RBP10.94□□□□□ -0.66
KLHL42-203ENST00000540301 GIGYF2Q6Y7W6 1299 aaKnown RBP10.94□□□□□ -0.66
KLHL42-203ENST00000540301 TMC4Q7Z404 712 aa10.94□□□□□ -0.66
KLHL42-203ENST00000540301 IFNL1Q8IU54 200 aa10.94□□□□□ -0.66
KLHL42-203ENST00000540301 CD99L2Q8TCZ2 262 aa10.94□□□□□ -0.66
KLHL42-203ENST00000540301 ZNF333Q96JL9 665 aa10.94□□□□□ -0.66
KLHL42-203ENST00000540301 EFCC1Q9HA90 598 aa10.94□□□□□ -0.66
KLHL42-203ENST00000540301 RRP7AQ9Y3A4 280 aaKnown RBP10.94□□□□□ -0.66
KLHL42-203ENST00000540301 CENPFP49454 3210 aa10.94□□□□□ -0.66
KLHL42-203ENST00000540301 HTTP42858 3142 aa10.93□□□□□ -0.66
KLHL42-203ENST00000540301 NF2P35240 595 aa10.93□□□□□ -0.66
KLHL42-203ENST00000540301 INHBEP58166 350 aa10.93□□□□□ -0.66
KLHL42-203ENST00000540301 PTPN12Q05209 780 aaKnown RBP10.93□□□□□ -0.66
KLHL42-203ENST00000540301 SPRYD7Q5W111 196 aa10.93□□□□□ -0.66
KLHL42-203ENST00000540301 NBPF11Q86T75 865 aa10.93□□□□□ -0.66
KLHL42-203ENST00000540301 DPF3Q92784 378 aa10.93□□□□□ -0.66
KLHL42-203ENST00000540301 ZNF609O15014 1411 aa10.92□□□□□ -0.66
KLHL42-203ENST00000540301 HCLS1P14317 486 aaPredicted RBP10.92□□□□□ -0.66
KLHL42-203ENST00000540301 MYL6BP14649 208 aa10.92□□□□□ -0.66
KLHL42-203ENST00000540301 MCM10Q7L590 875 aa10.92□□□□□ -0.66
KLHL42-203ENST00000540301 RTF1Q92541 710 aaKnown RBP10.92□□□□□ -0.66
KLHL42-203ENST00000540301 PHACTR3Q96KR7 559 aa10.92□□□□□ -0.66
KLHL42-203ENST00000540301 EYA3Q99504 573 aa10.92□□□□□ -0.66
KLHL42-203ENST00000540301 POLLQ9UGP5 575 aa10.92□□□□□ -0.66
KLHL42-203ENST00000540301 COL6A3P12111 3177 aa10.92□□□□□ -0.66
KLHL42-203ENST00000540301 ANKRD36CQ5JPF3 1778 aa10.92□□□□□ -0.66
KLHL42-203ENST00000540301 A0A0C4DFX4 3053 aa10.92□□□□□ -0.66
KLHL42-203ENST00000540301 MANSC4A6NHS7 340 aaPredicted RBP10.91□□□□□ -0.66
KLHL42-203ENST00000540301 MYCP01106 439 aaPredicted RBP10.91□□□□□ -0.66
KLHL42-203ENST00000540301 SLC9C1Q4G0N8 1177 aa10.91□□□□□ -0.66
KLHL42-203ENST00000540301 ARMC9Q7Z3E5 817 aa10.91□□□□□ -0.66
KLHL42-203ENST00000540301 AGBL3Q8NEM8 1001 aa10.91□□□□□ -0.66
KLHL42-203ENST00000540301 NECTIN2Q92692 538 aa10.91□□□□□ -0.66
KLHL42-203ENST00000540301 COL25A1Q9BXS0 654 aaPredicted RBP10.91□□□□□ -0.66
KLHL42-203ENST00000540301 PRO3102Q9H379 93 aa10.91□□□□□ -0.66
KLHL42-203ENST00000540301 MYOZ2Q9NPC6 264 aa10.91□□□□□ -0.66
KLHL42-203ENST00000540301 TAF1P21675 1872 aa10.91□□□□□ -0.66
KLHL42-203ENST00000540301 LAMB4A4D0S4 1761 aa10.9□□□□□ -0.66
KLHL42-203ENST00000540301 LAMB2P55268 1798 aa10.9□□□□□ -0.66
KLHL42-203ENST00000540301 DDX60Q8IY21 1712 aaKnown RBP10.9□□□□□ -0.66
KLHL42-203ENST00000540301 WTIPA6NIX2 430 aaPredicted RBP10.9□□□□□ -0.66
KLHL42-203ENST00000540301 G3V3G9 751 aa10.9□□□□□ -0.66
KLHL42-203ENST00000540301 USP17L8P0C7I0 530 aa10.9□□□□□ -0.66
KLHL42-203ENST00000540301 GPSM2P81274 684 aa10.9□□□□□ -0.66
KLHL42-203ENST00000540301 SP3Q02447 781 aa10.9□□□□□ -0.66
KLHL42-203ENST00000540301 PRKG1Q13976 671 aa10.9□□□□□ -0.66
KLHL42-203ENST00000540301 AMER1Q5JTC6 1135 aaPredicted RBP10.9□□□□□ -0.66
KLHL42-203ENST00000540301 DCAF8Q5TAQ9 597 aa10.9□□□□□ -0.66
KLHL42-203ENST00000540301 RSBN1LQ6PCB5 846 aaPredicted RBP10.9□□□□□ -0.66
KLHL42-203ENST00000540301 ZC3H12CQ9C0D7 883 aaKnown RBP10.9□□□□□ -0.66
KLHL42-203ENST00000540301 SCN9AQ15858 1988 aa10.9□□□□□ -0.66
KLHL42-203ENST00000540301 LRRC37AA6NMS7 1700 aa10.89□□□□□ -0.67
KLHL42-203ENST00000540301 IGF2BP3O00425 579 aaKnown RBP eCLIP10.89□□□□□ -0.67
KLHL42-203ENST00000540301 SOX1O00570 391 aaPredicted RBP10.89□□□□□ -0.67
KLHL42-203ENST00000540301 PRKAR2BP31323 418 aa10.89□□□□□ -0.67
KLHL42-203ENST00000540301 CAP1Q01518 475 aa10.89□□□□□ -0.67
KLHL42-203ENST00000540301 CRHR2Q13324 411 aa10.89□□□□□ -0.67
KLHL42-203ENST00000540301 LDLRAD1Q5T700 205 aa10.89□□□□□ -0.67
KLHL42-203ENST00000540301 LRCH3Q96II8 777 aa10.89□□□□□ -0.67
KLHL42-203ENST00000540301 MIS18AQ9NYP9 233 aa10.89□□□□□ -0.67
KLHL42-203ENST00000540301 PTCH2Q9Y6C5 1203 aa10.89□□□□□ -0.67
KLHL42-203ENST00000540301 A0A1W2PPC1 479 aa10.88□□□□□ -0.67
KLHL42-203ENST00000540301 DCTN1Q14203 1278 aa10.88□□□□□ -0.67
KLHL42-203ENST00000540301 TAF7Q15545 349 aaPredicted RBP10.88□□□□□ -0.67
KLHL42-203ENST00000540301 NBPF9Q3BBW0 867 aa10.88□□□□□ -0.67
KLHL42-203ENST00000540301 OTUD7BQ6GQQ9 843 aa10.88□□□□□ -0.67
KLHL42-203ENST00000540301 TBC1D16Q8TBP0 767 aa10.88□□□□□ -0.67
KLHL42-203ENST00000540301 CELF1Q92879 486 aaKnown RBP10.88□□□□□ -0.67
KLHL42-203ENST00000540301 SLC10A4Q96EP9 437 aa10.88□□□□□ -0.67
KLHL42-203ENST00000540301 ANGEL1Q9UNK9 670 aaKnown RBP10.88□□□□□ -0.67
KLHL42-203ENST00000540301 KDM3BQ7LBC6 1761 aa10.88□□□□□ -0.67
KLHL42-203ENST00000540301 ZBTB48P10074 688 aaPredicted RBP10.87□□□□□ -0.67
KLHL42-203ENST00000540301 ARHGEF6Q15052 776 aa10.87□□□□□ -0.67
KLHL42-203ENST00000540301 GMLQ99445 158 aa10.87□□□□□ -0.67
KLHL42-203ENST00000540301 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.87□□□□□ -0.67
KLHL42-203ENST00000540301 TRMT112Q9UI30 125 aaKnown RBP10.87□□□□□ -0.67
KLHL42-203ENST00000540301 SH3TC1Q8TE82 1336 aa10.86□□□□□ -0.67
KLHL42-203ENST00000540301 RANBP2P49792 3224 aaKnown RBP10.86□□□□□ -0.67
KLHL42-203ENST00000540301 NLRP10Q86W26 655 aa10.86□□□□□ -0.67
KLHL42-203ENST00000540301 WNK4Q96J92 1243 aa10.86□□□□□ -0.67
KLHL42-203ENST00000540301 HTATIP2Q9BUP3 242 aa10.86□□□□□ -0.67
KLHL42-203ENST00000540301 NR2E3Q9Y5X4 410 aa10.86□□□□□ -0.67
KLHL42-203ENST00000540301 COL3A1P02461 1466 aaPredicted RBP10.86□□□□□ -0.67
KLHL42-203ENST00000540301 ANKRD13DQ6ZTN6 518 aa10.85□□□□□ -0.67
KLHL42-203ENST00000540301 SH3TC2Q8TF17 1288 aa10.85□□□□□ -0.67
KLHL42-203ENST00000540301 RSPH6AQ9H0K4 717 aa10.85□□□□□ -0.67
KLHL42-203ENST00000540301 FZD1Q9UP38 647 aa10.85□□□□□ -0.67
KLHL42-203ENST00000540301 STXBP5LQ9Y2K9 1186 aa10.85□□□□□ -0.67
KLHL42-203ENST00000540301 WNT10BO00744 389 aa10.84□□□□□ -0.67
KLHL42-203ENST00000540301 ZBTB7BO15156 539 aaPredicted RBP10.84□□□□□ -0.67
KLHL42-203ENST00000540301 HTATSF1O43719 755 aaKnown RBP10.84□□□□□ -0.67
KLHL42-203ENST00000540301 HSP90AB3PQ58FF7 597 aa10.84□□□□□ -0.67
KLHL42-203ENST00000540301 DEFB123Q8N688 67 aa10.84□□□□□ -0.67
KLHL42-203ENST00000540301 SHISA4Q96DD7 197 aa10.84□□□□□ -0.67
KLHL42-203ENST00000540301 THUMPD2Q9BTF0 503 aaKnown RBP10.84□□□□□ -0.67
KLHL42-203ENST00000540301 ERBB4Q15303 1308 aa10.84□□□□□ -0.67
KLHL42-203ENST00000540301 USP17L3A6NCW0 530 aa10.83□□□□□ -0.68
KLHL42-203ENST00000540301 USP17L4A6NCW7 530 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms