RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 GREM2Q9H772 168 aa13.16□□□□□ -0.3
LEMD3-202ENST00000539442 LRP5O75197 1615 aa13.15□□□□□ -0.3
LEMD3-202ENST00000539442 TAF7LQ5H9L4 462 aa13.15□□□□□ -0.3
LEMD3-202ENST00000539442 PARP3Q9Y6F1 533 aa13.15□□□□□ -0.3
LEMD3-202ENST00000539442 NRXN2Q9P2S2 1712 aa13.15□□□□□ -0.3
LEMD3-202ENST00000539442 EYA2O00167 538 aa13.14□□□□□ -0.31
LEMD3-202ENST00000539442 APBB1O00213 710 aa13.14□□□□□ -0.31
LEMD3-202ENST00000539442 MMP10P09238 476 aa13.14□□□□□ -0.31
LEMD3-202ENST00000539442 IL15P40933 162 aaPredicted RBP13.14□□□□□ -0.31
LEMD3-202ENST00000539442 KLHDC4Q8TBB5 520 aa13.14□□□□□ -0.31
LEMD3-202ENST00000539442 CCDC85AQ96PX6 553 aaPredicted RBP13.14□□□□□ -0.31
LEMD3-202ENST00000539442 SIL1Q9H173 461 aa13.14□□□□□ -0.31
LEMD3-202ENST00000539442 ATMINO43313 823 aaPredicted RBP13.13□□□□□ -0.31
LEMD3-202ENST00000539442 PDE4AP27815 886 aa13.13□□□□□ -0.31
LEMD3-202ENST00000539442 CLASRPQ8N2M8 674 aaKnown RBP13.13□□□□□ -0.31
LEMD3-202ENST00000539442 CDC5LQ99459 802 aaKnown RBP13.13□□□□□ -0.31
LEMD3-202ENST00000539442 SMARCA5O60264 1052 aaPredicted RBP13.12□□□□□ -0.31
LEMD3-202ENST00000539442 SASH1O94885 1247 aa13.12□□□□□ -0.31
LEMD3-202ENST00000539442 IGHMBP2P38935 993 aaKnown RBP13.12□□□□□ -0.31
LEMD3-202ENST00000539442 RGS3P49796 1198 aa13.12□□□□□ -0.31
LEMD3-202ENST00000539442 CRY2Q49AN0 593 aa13.12□□□□□ -0.31
LEMD3-202ENST00000539442 MSL1Q68DK7 614 aa13.12□□□□□ -0.31
LEMD3-202ENST00000539442 C3orf67Q6ZVT6 689 aa13.12□□□□□ -0.31
LEMD3-202ENST00000539442 ATG9AQ7Z3C6 839 aa13.12□□□□□ -0.31
LEMD3-202ENST00000539442 GPR108Q9NPR9 543 aa13.12□□□□□ -0.31
LEMD3-202ENST00000539442 KLRG2A4D1S0 409 aaPredicted RBP13.11□□□□□ -0.31
LEMD3-202ENST00000539442 LDHAL6AQ6ZMR3 332 aa13.11□□□□□ -0.31
LEMD3-202ENST00000539442 ZNF594Q96JF6 807 aaPredicted RBP13.11□□□□□ -0.31
LEMD3-202ENST00000539442 BRIP1Q9BX63 1249 aa13.11□□□□□ -0.31
LEMD3-202ENST00000539442 IL1RAPL2Q9NP60 686 aa13.11□□□□□ -0.31
LEMD3-202ENST00000539442 TNRC6CQ9HCJ0 1690 aaKnown RBP13.11□□□□□ -0.31
LEMD3-202ENST00000539442 LRRC24Q50LG9 513 aa13.1□□□□□ -0.31
LEMD3-202ENST00000539442 DDX46Q7L014 1031 aaKnown RBP13.1□□□□□ -0.31
LEMD3-202ENST00000539442 SKAP1Q86WV1 359 aa13.1□□□□□ -0.31
LEMD3-202ENST00000539442 ANKRD18AQ8IVF6 992 aa13.1□□□□□ -0.31
LEMD3-202ENST00000539442 CCDC24Q8N4L8 307 aa13.1□□□□□ -0.31
LEMD3-202ENST00000539442 MPHOSPH8Q99549 860 aa13.1□□□□□ -0.31
LEMD3-202ENST00000539442 PUS3Q9BZE2 481 aaKnown RBP13.1□□□□□ -0.31
LEMD3-202ENST00000539442 OSBPL3Q9H4L5 887 aa13.1□□□□□ -0.31
LEMD3-202ENST00000539442 SEC31BQ9NQW1 1179 aa13.1□□□□□ -0.31
LEMD3-202ENST00000539442 CNNM1Q9NRU3 951 aa13.1□□□□□ -0.31
LEMD3-202ENST00000539442 RIPOR2Q9Y4F9 1068 aa13.1□□□□□ -0.31
LEMD3-202ENST00000539442 AOX1Q06278 1338 aa13.1□□□□□ -0.31
LEMD3-202ENST00000539442 MROH5Q6ZUA9 1318 aa13.1□□□□□ -0.31
LEMD3-202ENST00000539442 SALL3Q9BXA9 1300 aa13.1□□□□□ -0.31
LEMD3-202ENST00000539442 CASZ1Q86V15 1759 aa13.09□□□□□ -0.31
LEMD3-202ENST00000539442 PDE6BP35913 854 aa13.09□□□□□ -0.31
LEMD3-202ENST00000539442 TFCP2Q12800 502 aa13.09□□□□□ -0.31
LEMD3-202ENST00000539442 ILDR2Q71H61 639 aa13.09□□□□□ -0.31
LEMD3-202ENST00000539442 PLEKHM2Q8IWE5 1019 aa13.09□□□□□ -0.31
LEMD3-202ENST00000539442 RPGRQ92834 1020 aaKnown RBP13.09□□□□□ -0.31
LEMD3-202ENST00000539442 PDGFDQ9GZP0 370 aaPredicted RBP13.09□□□□□ -0.31
LEMD3-202ENST00000539442 CEP126Q9P2H0 1117 aa13.09□□□□□ -0.31
LEMD3-202ENST00000539442 IFIT2P09913 472 aaKnown RBP13.08□□□□□ -0.32
LEMD3-202ENST00000539442 MX1P20591 662 aa13.08□□□□□ -0.32
LEMD3-202ENST00000539442 HOXA10P31260 410 aaPredicted RBP13.08□□□□□ -0.32
LEMD3-202ENST00000539442 GRAPQ13588 217 aa13.08□□□□□ -0.32
LEMD3-202ENST00000539442 TNNI3KQ59H18 835 aa13.08□□□□□ -0.32
LEMD3-202ENST00000539442 METTL24Q5JXM2 366 aa13.08□□□□□ -0.32
LEMD3-202ENST00000539442 AACSQ86V21 672 aa13.08□□□□□ -0.32
LEMD3-202ENST00000539442 C16orf71Q8IYS4 520 aaPredicted RBP13.08□□□□□ -0.32
LEMD3-202ENST00000539442 GRAPLQ8TC17 118 aaPredicted RBP13.08□□□□□ -0.32
LEMD3-202ENST00000539442 RBM17Q96I25 401 aaKnown RBP13.08□□□□□ -0.32
LEMD3-202ENST00000539442 GPATCH3Q96I76 525 aa13.08□□□□□ -0.32
LEMD3-202ENST00000539442 MTFR1LQ9H019 292 aa13.08□□□□□ -0.32
LEMD3-202ENST00000539442 BSDC1Q9NW68 430 aaPredicted RBP13.08□□□□□ -0.32
LEMD3-202ENST00000539442 STAP2Q9UGK3 403 aa13.08□□□□□ -0.32
LEMD3-202ENST00000539442 AKAP2Q9Y2D5 859 aa13.08□□□□□ -0.32
LEMD3-202ENST00000539442 FPGT-TNNI3KV9GXZ4 949 aa13.08□□□□□ -0.32
LEMD3-202ENST00000539442 ZNF609O15014 1411 aa13.07□□□□□ -0.32
LEMD3-202ENST00000539442 PDE1AP54750 535 aa13.07□□□□□ -0.32
LEMD3-202ENST00000539442 RPS8P62241 208 aaKnown RBP13.07□□□□□ -0.32
LEMD3-202ENST00000539442 R3HDM1Q15032 1099 aaKnown RBP13.07□□□□□ -0.32
LEMD3-202ENST00000539442 CELF1Q92879 486 aaKnown RBP13.07□□□□□ -0.32
LEMD3-202ENST00000539442 EAF2Q96CJ1 260 aaPredicted RBP13.07□□□□□ -0.32
LEMD3-202ENST00000539442 TTC41PQ6P2S7 1318 aa13.07□□□□□ -0.32
LEMD3-202ENST00000539442 C10orf71Q711Q0 1435 aa13.06□□□□□ -0.32
LEMD3-202ENST00000539442 PDE8BO95263 885 aa13.06□□□□□ -0.32
LEMD3-202ENST00000539442 NPR1P16066 1061 aa13.06□□□□□ -0.32
LEMD3-202ENST00000539442 BMP2KLQ5H9B9 411 aa13.06□□□□□ -0.32
LEMD3-202ENST00000539442 TMC4Q7Z404 712 aa13.06□□□□□ -0.32
LEMD3-202ENST00000539442 VGLL2Q8N8G2 317 aa13.06□□□□□ -0.32
LEMD3-202ENST00000539442 OTUD7AQ8TE49 926 aaPredicted RBP13.06□□□□□ -0.32
LEMD3-202ENST00000539442 CRAMP1Q96RY5 1269 aa13.06□□□□□ -0.32
LEMD3-202ENST00000539442 CREBZFQ9NS37 354 aa13.06□□□□□ -0.32
LEMD3-202ENST00000539442 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.06□□□□□ -0.32
LEMD3-202ENST00000539442 ERC2O15083 957 aa13.05□□□□□ -0.32
LEMD3-202ENST00000539442 SRGNP10124 158 aa13.05□□□□□ -0.32
LEMD3-202ENST00000539442 POLD1P28340 1107 aa13.05□□□□□ -0.32
LEMD3-202ENST00000539442 SPNS2Q8IVW8 549 aa13.05□□□□□ -0.32
LEMD3-202ENST00000539442 ECHDC1Q9NTX5 307 aa13.05□□□□□ -0.32
LEMD3-202ENST00000539442 ANKRD31Q8N7Z5 1873 aa13.05□□□□□ -0.32
LEMD3-202ENST00000539442 A0A1B0GUL7 405 aa13.04□□□□□ -0.32
LEMD3-202ENST00000539442 BBOX1O75936 387 aa13.04□□□□□ -0.32
LEMD3-202ENST00000539442 ZBTB7AO95365 584 aa13.04□□□□□ -0.32
LEMD3-202ENST00000539442 CHRNDQ07001 517 aa13.04□□□□□ -0.32
LEMD3-202ENST00000539442 PUM3Q15397 648 aaKnown RBP13.04□□□□□ -0.32
LEMD3-202ENST00000539442 ATP2B3Q16720 1220 aa13.04□□□□□ -0.32
LEMD3-202ENST00000539442 TTC22Q5TAA0 569 aa13.04□□□□□ -0.32
LEMD3-202ENST00000539442 MASTLQ96GX5 879 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms