RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 PURBQ96QR8 312 aaKnown RBP7.53□□□□□ -1.2
SNHG1-207ENST00000537965 TBC1D2BQ9UPU7 963 aa7.53□□□□□ -1.2
SNHG1-207ENST00000537965 PCDHB9Q9Y5E1 797 aa7.53□□□□□ -1.2
SNHG1-207ENST00000537965 MAP3K5Q99683 1374 aa7.53□□□□□ -1.2
SNHG1-207ENST00000537965 NFAT5O94916 1531 aa7.52□□□□□ -1.2
SNHG1-207ENST00000537965 USP31Q70CQ4 1352 aa7.52□□□□□ -1.21
SNHG1-207ENST00000537965 GPR162Q16538 588 aa7.52□□□□□ -1.21
SNHG1-207ENST00000537965 Q6ZVU0 165 aa7.52□□□□□ -1.21
SNHG1-207ENST00000537965 ZNF592Q92610 1267 aa7.52□□□□□ -1.21
SNHG1-207ENST00000537965 TSEN34Q9BSV6 310 aaKnown RBP7.52□□□□□ -1.21
SNHG1-207ENST00000537965 PDGFDQ9GZP0 370 aaPredicted RBP7.52□□□□□ -1.21
SNHG1-207ENST00000537965 TERF2IPQ9NYB0 399 aa7.52□□□□□ -1.21
SNHG1-207ENST00000537965 ZNF330Q9Y3S2 320 aaPredicted RBP7.52□□□□□ -1.21
SNHG1-207ENST00000537965 SBNO2Q9Y2G9 1366 aa7.51□□□□□ -1.21
SNHG1-207ENST00000537965 ERVH48-1M5A8F1 160 aa7.51□□□□□ -1.21
SNHG1-207ENST00000537965 GIGYF1O75420 1035 aaPredicted RBP7.51□□□□□ -1.21
SNHG1-207ENST00000537965 UPP2O95045 317 aa7.51□□□□□ -1.21
SNHG1-207ENST00000537965 MCM6Q14566 821 aa7.51□□□□□ -1.21
SNHG1-207ENST00000537965 TMEM132AQ24JP5 1023 aa7.51□□□□□ -1.21
SNHG1-207ENST00000537965 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.51□□□□□ -1.21
SNHG1-207ENST00000537965 LINC00528Q8N1L1 170 aa7.51□□□□□ -1.21
SNHG1-207ENST00000537965 ACSBG1Q96GR2 724 aa7.51□□□□□ -1.21
SNHG1-207ENST00000537965 PUS7Q96PZ0 661 aaKnown RBP7.51□□□□□ -1.21
SNHG1-207ENST00000537965 COL24A1Q17RW2 1714 aa7.51□□□□□ -1.21
SNHG1-207ENST00000537965 BMP2P12643 396 aa7.5□□□□□ -1.21
SNHG1-207ENST00000537965 RAB15P59190 212 aa7.5□□□□□ -1.21
SNHG1-207ENST00000537965 C1QTNF8P60827 252 aa7.5□□□□□ -1.21
SNHG1-207ENST00000537965 CBLBQ13191 982 aa7.5□□□□□ -1.21
SNHG1-207ENST00000537965 TMC1Q8TDI8 760 aa7.5□□□□□ -1.21
SNHG1-207ENST00000537965 ANKRD24Q8TF21 1146 aa7.5□□□□□ -1.21
SNHG1-207ENST00000537965 TMPRSS4Q9NRS4 437 aa7.5□□□□□ -1.21
SNHG1-207ENST00000537965 LY75O60449 1722 aa7.49□□□□□ -1.21
SNHG1-207ENST00000537965 PAPPAQ13219 1627 aa7.49□□□□□ -1.21
SNHG1-207ENST00000537965 SENP3-EIF4A1A0A087X0R7 540 aa7.49□□□□□ -1.21
SNHG1-207ENST00000537965 GRIN3BO60391 1043 aa7.49□□□□□ -1.21
SNHG1-207ENST00000537965 IRF5Q13568 498 aa7.49□□□□□ -1.21
SNHG1-207ENST00000537965 C6orf118Q5T5N4 469 aa7.49□□□□□ -1.21
SNHG1-207ENST00000537965 IP6K1Q92551 441 aa7.49□□□□□ -1.21
SNHG1-207ENST00000537965 TFCP2L1Q9NZI6 479 aa7.49□□□□□ -1.21
SNHG1-207ENST00000537965 TUBGCP6Q96RT7 1819 aa7.49□□□□□ -1.21
SNHG1-207ENST00000537965 EDC4Q6P2E9 1401 aaKnown RBP7.49□□□□□ -1.21
SNHG1-207ENST00000537965 RGPD2P0DJD1 1756 aa7.48□□□□□ -1.21
SNHG1-207ENST00000537965 LILRA1O75019 489 aa7.48□□□□□ -1.21
SNHG1-207ENST00000537965 NEUROD1Q13562 356 aa7.48□□□□□ -1.21
SNHG1-207ENST00000537965 RNF20Q5VTR2 975 aa7.48□□□□□ -1.21
SNHG1-207ENST00000537965 NME9Q86XW9 330 aa7.48□□□□□ -1.21
SNHG1-207ENST00000537965 DDX54Q8TDD1 881 aaKnown RBP7.48□□□□□ -1.21
SNHG1-207ENST00000537965 CARD11Q9BXL7 1154 aa7.48□□□□□ -1.21
SNHG1-207ENST00000537965 GDPD2Q9HCC8 539 aa7.48□□□□□ -1.21
SNHG1-207ENST00000537965 UTRNP46939 3433 aa7.47□□□□□ -1.21
SNHG1-207ENST00000537965 ADD1P35611 737 aaKnown RBP7.47□□□□□ -1.21
SNHG1-207ENST00000537965 LCE2AQ5TA79 106 aaPredicted RBP7.47□□□□□ -1.21
SNHG1-207ENST00000537965 TREML4Q6UXN2 200 aa7.47□□□□□ -1.21
SNHG1-207ENST00000537965 FLAD1Q8NFF5 587 aa7.47□□□□□ -1.21
SNHG1-207ENST00000537965 ZCRB1Q8TBF4 217 aaKnown RBP7.47□□□□□ -1.21
SNHG1-207ENST00000537965 SYTL4Q96C24 671 aaPredicted RBP7.47□□□□□ -1.21
SNHG1-207ENST00000537965 COG3Q96JB2 828 aa7.47□□□□□ -1.21
SNHG1-207ENST00000537965 LRRC4BQ9NT99 713 aa7.47□□□□□ -1.21
SNHG1-207ENST00000537965 TAF1LQ8IZX4 1826 aa7.47□□□□□ -1.21
SNHG1-207ENST00000537965 CGNL1Q0VF96 1302 aa7.47□□□□□ -1.21
SNHG1-207ENST00000537965 DOT1LQ8TEK3 1739 aa7.47□□□□□ -1.21
SNHG1-207ENST00000537965 TERTO14746 1132 aaKnown RBP7.46□□□□□ -1.22
SNHG1-207ENST00000537965 SPINT1O43278 529 aa7.46□□□□□ -1.22
SNHG1-207ENST00000537965 AMPHP49418 695 aa7.46□□□□□ -1.22
SNHG1-207ENST00000537965 NFX1Q12986 1120 aaKnown RBP7.46□□□□□ -1.22
SNHG1-207ENST00000537965 ZNF827Q17R98 1081 aa7.46□□□□□ -1.22
SNHG1-207ENST00000537965 SIN3AQ96ST3 1273 aa7.46□□□□□ -1.22
SNHG1-207ENST00000537965 SLC12A5Q9H2X9 1139 aa7.46□□□□□ -1.22
SNHG1-207ENST00000537965 GOLGB1Q14789 3259 aaKnown RBP7.46□□□□□ -1.22
SNHG1-207ENST00000537965 ANKRD36BQ8N2N9 1353 aa7.46□□□□□ -1.22
SNHG1-207ENST00000537965 ITGB4P16144 1822 aa7.45□□□□□ -1.22
SNHG1-207ENST00000537965 CD163L1Q9NR16 1453 aa7.45□□□□□ -1.22
SNHG1-207ENST00000537965 ABL2P42684 1182 aa7.45□□□□□ -1.22
SNHG1-207ENST00000537965 EIF4G2P78344 907 aaKnown RBP eCLIP7.45□□□□□ -1.22
SNHG1-207ENST00000537965 LTV1Q96GA3 475 aaPredicted RBP7.45□□□□□ -1.22
SNHG1-207ENST00000537965 AGBL1Q96MI9 1066 aa7.45□□□□□ -1.22
SNHG1-207ENST00000537965 CEP126Q9P2H0 1117 aa7.45□□□□□ -1.22
SNHG1-207ENST00000537965 NXF1Q9UBU9 619 aaKnown RBP7.45□□□□□ -1.22
SNHG1-207ENST00000537965 PNPLA7Q6ZV29 1317 aa7.45□□□□□ -1.22
SNHG1-207ENST00000537965 USP47Q96K76 1375 aa7.45□□□□□ -1.22
SNHG1-207ENST00000537965 CEP350Q5VT06 3117 aa7.44□□□□□ -1.22
SNHG1-207ENST00000537965 SOBPA7XYQ1 873 aa7.44□□□□□ -1.22
SNHG1-207ENST00000537965 MAN1A2O60476 641 aa7.44□□□□□ -1.22
SNHG1-207ENST00000537965 WFS1O76024 890 aa7.44□□□□□ -1.22
SNHG1-207ENST00000537965 ADH1AP07327 375 aa7.44□□□□□ -1.22
SNHG1-207ENST00000537965 FLIIQ13045 1269 aa7.44□□□□□ -1.22
SNHG1-207ENST00000537965 WASHC4Q2M389 1173 aa7.44□□□□□ -1.22
SNHG1-207ENST00000537965 KDF1Q8NAX2 398 aaPredicted RBP7.44□□□□□ -1.22
SNHG1-207ENST00000537965 RAPGEF4Q8WZA2 1011 aa7.44□□□□□ -1.22
SNHG1-207ENST00000537965 CCNL1Q9UK58 526 aaPredicted RBP7.44□□□□□ -1.22
SNHG1-207ENST00000537965 COG6Q9Y2V7 657 aa7.44□□□□□ -1.22
SNHG1-207ENST00000537965 A0A1W2PP64 1363 aa7.44□□□□□ -1.22
SNHG1-207ENST00000537965 SHANK3Q9BYB0 1731 aa7.44□□□□□ -1.22
SNHG1-207ENST00000537965 SMG6Q86US8 1419 aaKnown RBP7.44□□□□□ -1.22
SNHG1-207ENST00000537965 TTLL8A6PVC2 850 aa7.43□□□□□ -1.22
SNHG1-207ENST00000537965 HOXC9P31274 260 aa7.43□□□□□ -1.22
SNHG1-207ENST00000537965 ERVK-9P63128 1117 aa7.43□□□□□ -1.22
SNHG1-207ENST00000537965 RELBQ01201 579 aa7.43□□□□□ -1.22
SNHG1-207ENST00000537965 VAC14Q08AM6 782 aa7.43□□□□□ -1.22
SNHG1-207ENST00000537965 NPAS3Q8IXF0 933 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms