RNA–Protein interactions for RNA: ENST00000536661.1

UBC-204, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-204ENST00000536661 TRPM7Q96QT4 1865 aa19.06■□□□□ 0.64
UBC-204ENST00000536661 GMPSP49915 693 aaPredicted RBP19.06■□□□□ 0.64
UBC-204ENST00000536661 MAP1SQ66K74 1059 aaPredicted RBP19.06■□□□□ 0.64
UBC-204ENST00000536661 CDC5LQ99459 802 aaKnown RBP19.06■□□□□ 0.64
UBC-204ENST00000536661 EYA3Q99504 573 aa19.06■□□□□ 0.64
UBC-204ENST00000536661 UFL1O94874 794 aa19.05■□□□□ 0.64
UBC-204ENST00000536661 PLA2G12BQ9BX93 195 aa19.05■□□□□ 0.64
UBC-204ENST00000536661 ANKIB1Q9P2G1 1089 aa19.05■□□□□ 0.64
UBC-204ENST00000536661 ECE2O60344 883 aa19.04■□□□□ 0.64
UBC-204ENST00000536661 TNIP1Q15025 636 aa19.04■□□□□ 0.64
UBC-204ENST00000536661 DOK7Q18PE1 504 aa19.04■□□□□ 0.64
UBC-204ENST00000536661 BEND3Q5T5X7 828 aa19.04■□□□□ 0.64
UBC-204ENST00000536661 USP50Q70EL3 339 aaPredicted RBP19.04■□□□□ 0.64
UBC-204ENST00000536661 CNTROBQ8N137 903 aa19.04■□□□□ 0.64
UBC-204ENST00000536661 GGA1Q9UJY5 639 aa19.04■□□□□ 0.64
UBC-204ENST00000536661 ZNF646O15015 1829 aaPredicted RBP19.03■□□□□ 0.64
UBC-204ENST00000536661 CCER2I3L3R5 266 aa19.03■□□□□ 0.64
UBC-204ENST00000536661 FAM161AQ3B820 660 aa19.03■□□□□ 0.64
UBC-204ENST00000536661 BCL2L13Q9BXK5 485 aa19.03■□□□□ 0.64
UBC-204ENST00000536661 ADARB2Q9NS39 739 aaKnown RBP19.03■□□□□ 0.64
UBC-204ENST00000536661 MKRN1Q9UHC7 482 aaKnown RBP19.03■□□□□ 0.64
UBC-204ENST00000536661 XDHP47989 1333 aa19.02■□□□□ 0.64
UBC-204ENST00000536661 E9PSI1 815 aa19.02■□□□□ 0.64
UBC-204ENST00000536661 PSMD14O00487 310 aa19.02■□□□□ 0.64
UBC-204ENST00000536661 ZC3H12CQ9C0D7 883 aaKnown RBP19.02■□□□□ 0.64
UBC-204ENST00000536661 SHTN1A0MZ66 631 aa19.01■□□□□ 0.63
UBC-204ENST00000536661 SLFN5Q08AF3 891 aa19.01■□□□□ 0.63
UBC-204ENST00000536661 KCNQ5Q9NR82 932 aa19.01■□□□□ 0.63
UBC-204ENST00000536661 BSDC1Q9NW68 430 aaPredicted RBP19.01■□□□□ 0.63
UBC-204ENST00000536661 ZBTB12Q9Y330 459 aaPredicted RBP19.01■□□□□ 0.63
UBC-204ENST00000536661 CSF1RP07333 972 aa19■□□□□ 0.63
UBC-204ENST00000536661 ITGA6P23229 1130 aa19■□□□□ 0.63
UBC-204ENST00000536661 MINPP1Q9UNW1 487 aa19■□□□□ 0.63
UBC-204ENST00000536661 CNTNAP1P78357 1384 aa19■□□□□ 0.63
UBC-204ENST00000536661 WTIPA6NIX2 430 aaPredicted RBP18.99■□□□□ 0.63
UBC-204ENST00000536661 TMEM88BA6NKF7 163 aa18.99■□□□□ 0.63
UBC-204ENST00000536661 ATP2B4P23634 1241 aa18.99■□□□□ 0.63
UBC-204ENST00000536661 FMR1Q06787 632 aaKnown RBP eCLIP18.99■□□□□ 0.632e-39■□□□□ 10.8
UBC-204ENST00000536661 COL13A1Q5TAT6 717 aaPredicted RBP18.99■□□□□ 0.63
UBC-204ENST00000536661 TRPM4Q8TD43 1214 aa18.99■□□□□ 0.63
UBC-204ENST00000536661 CDCA7LQ96GN5 454 aa18.99■□□□□ 0.63
UBC-204ENST00000536661 CNOT7Q9UIV1 285 aaKnown RBP18.99■□□□□ 0.63
UBC-204ENST00000536661 GRM8O00222 908 aa18.98■□□□□ 0.63
UBC-204ENST00000536661 HSPA1AP0DMV8 641 aaKnown RBP18.98■□□□□ 0.63
UBC-204ENST00000536661 HSPA1BP0DMV9 641 aaKnown RBP18.98■□□□□ 0.63
UBC-204ENST00000536661 IGHMBP2P38935 993 aaKnown RBP18.98■□□□□ 0.63
UBC-204ENST00000536661 FOXO4P98177 505 aa18.98■□□□□ 0.63
UBC-204ENST00000536661 SLC4A10Q6U841 1118 aa18.98■□□□□ 0.63
UBC-204ENST00000536661 MICALL2Q8IY33 904 aa18.98■□□□□ 0.63
UBC-204ENST00000536661 MRPL50Q8N5N7 158 aaKnown RBP18.98■□□□□ 0.63
UBC-204ENST00000536661 POLR2AP24928 1970 aaKnown RBP18.98■□□□□ 0.63
UBC-204ENST00000536661 MED23Q9ULK4 1368 aa18.97■□□□□ 0.63
UBC-204ENST00000536661 G3V3G9 751 aa18.97■□□□□ 0.63
UBC-204ENST00000536661 HIRAP54198 1017 aaPredicted RBP18.97■□□□□ 0.63
UBC-204ENST00000536661 DCAF8Q5TAQ9 597 aa18.97■□□□□ 0.63
UBC-204ENST00000536661 DPF2Q92785 391 aa18.97■□□□□ 0.63
UBC-204ENST00000536661 H7C1D1 291 aa18.96■□□□□ 0.63
UBC-204ENST00000536661 TRAF5O00463 557 aa18.96■□□□□ 0.63
UBC-204ENST00000536661 ALDH1L1O75891 902 aa18.96■□□□□ 0.63
UBC-204ENST00000536661 CCT4P50991 539 aaKnown RBP18.96■□□□□ 0.63
UBC-204ENST00000536661 EPHA10Q5JZY3 1008 aa18.96■□□□□ 0.63
UBC-204ENST00000536661 SSH1Q8WYL5 1049 aa18.96■□□□□ 0.63
UBC-204ENST00000536661 ZNF609O15014 1411 aa18.96■□□□□ 0.63
UBC-204ENST00000536661 ANKRD18BA2A2Z9 1011 aa18.95■□□□□ 0.62
UBC-204ENST00000536661 RPS12P25398 132 aaKnown RBP18.95■□□□□ 0.62
UBC-204ENST00000536661 VEGFBP49765 207 aa18.95■□□□□ 0.62
UBC-204ENST00000536661 MPHOSPH8Q99549 860 aa18.95■□□□□ 0.62
UBC-204ENST00000536661 SRCIN1Q9C0H9 1055 aa18.95■□□□□ 0.62
UBC-204ENST00000536661 PGAP2Q9UHJ9 254 aa18.95■□□□□ 0.62
UBC-204ENST00000536661 VIL1P09327 827 aaKnown RBP18.94■□□□□ 0.62
UBC-204ENST00000536661 SAMD7Q7Z3H4 446 aa18.94■□□□□ 0.62
UBC-204ENST00000536661 TRMT2AQ8IZ69 625 aaKnown RBP18.94■□□□□ 0.62
UBC-204ENST00000536661 C9orf78Q9NZ63 289 aaPredicted RBP18.94■□□□□ 0.62
UBC-204ENST00000536661 CHMP3Q9Y3E7 222 aa18.94■□□□□ 0.62
UBC-204ENST00000536661 PTPRCP08575 1304 aa18.94■□□□□ 0.62
UBC-204ENST00000536661 EGFRP00533 1210 aa18.93■□□□□ 0.62
UBC-204ENST00000536661 IFIT5Q13325 482 aaKnown RBP18.93■□□□□ 0.62
UBC-204ENST00000536661 CST9Q5W186 159 aa18.93■□□□□ 0.62
UBC-204ENST00000536661 LMBR1LQ6UX01 489 aa18.93■□□□□ 0.62
UBC-204ENST00000536661 ZC3H15Q8WU90 426 aaKnown RBP18.93■□□□□ 0.62
UBC-204ENST00000536661 GLIS2Q9BZE0 524 aaPredicted RBP18.93■□□□□ 0.62
UBC-204ENST00000536661 LEMD3Q9Y2U8 911 aa18.93■□□□□ 0.62
UBC-204ENST00000536661 RASSF10A6NK89 507 aa18.92■□□□□ 0.62
UBC-204ENST00000536661 CHRNDQ07001 517 aa18.92■□□□□ 0.62
UBC-204ENST00000536661 TBC1D10BQ4KMP7 808 aaPredicted RBP18.92■□□□□ 0.62
UBC-204ENST00000536661 PODNQ7Z5L7 613 aa18.92■□□□□ 0.62
UBC-204ENST00000536661 TXNRD3Q86VQ6 643 aa18.92■□□□□ 0.62
UBC-204ENST00000536661 ANKRD2Q9GZV1 360 aa18.92■□□□□ 0.62
UBC-204ENST00000536661 ZNF804BA4D1E1 1349 aa18.92■□□□□ 0.62
UBC-204ENST00000536661 KLRK1P26718 216 aa18.91■□□□□ 0.62
UBC-204ENST00000536661 RSBN1LQ6PCB5 846 aaPredicted RBP18.91■□□□□ 0.62
UBC-204ENST00000536661 SUCLG2Q96I99 432 aa18.91■□□□□ 0.62
UBC-204ENST00000536661 THSD7BQ9C0I4 1608 aa18.91■□□□□ 0.62
UBC-204ENST00000536661 NBPF7P0C2Y1 421 aaPredicted RBP18.9■□□□□ 0.62
UBC-204ENST00000536661 KIF4BQ2VIQ3 1234 aa18.9■□□□□ 0.62
UBC-204ENST00000536661 DEFB115Q30KQ5 88 aa18.9■□□□□ 0.62
UBC-204ENST00000536661 ALDH1L2Q3SY69 923 aa18.9■□□□□ 0.62
UBC-204ENST00000536661 RBM26Q5T8P6 1007 aaKnown RBP18.9■□□□□ 0.62
UBC-204ENST00000536661 KAZALD1Q96I82 304 aa18.9■□□□□ 0.62
UBC-204ENST00000536661 ZNF594Q96JF6 807 aaPredicted RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms