RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 SUPT20HQ8NEM7 779 aa11.31□□□□□ -0.6
CHD4-204ENST00000535810 SCN4AP35499 1836 aa11.3□□□□□ -0.6
CHD4-204ENST00000535810 LTBP1Q14766 1721 aa11.3□□□□□ -0.6
CHD4-204ENST00000535810 CCER2I3L3R5 266 aa11.3□□□□□ -0.6
CHD4-204ENST00000535810 PDE8AO60658 829 aa11.3□□□□□ -0.6
CHD4-204ENST00000535810 POTEIP0CG38 1075 aa11.3□□□□□ -0.6
CHD4-204ENST00000535810 POTEJP0CG39 1038 aa11.3□□□□□ -0.6
CHD4-204ENST00000535810 EIF6P56537 245 aaKnown RBP11.3□□□□□ -0.6
CHD4-204ENST00000535810 CCDC152Q4G0S7 254 aa11.3□□□□□ -0.6
CHD4-204ENST00000535810 CHRDL2Q6WN34 429 aa11.3□□□□□ -0.6
CHD4-204ENST00000535810 NIM1KQ8IY84 436 aa11.3□□□□□ -0.6
CHD4-204ENST00000535810 DNAAF4Q8WXU2 420 aa11.3□□□□□ -0.6
CHD4-204ENST00000535810 VPS33BQ9H267 617 aa11.3□□□□□ -0.6
CHD4-204ENST00000535810 TAF1DQ9H5J8 278 aaPredicted RBP11.3□□□□□ -0.6
CHD4-204ENST00000535810 SEC31BQ9NQW1 1179 aa11.3□□□□□ -0.6
CHD4-204ENST00000535810 FARP1Q9Y4F1 1045 aaPredicted RBP11.3□□□□□ -0.6
CHD4-204ENST00000535810 FXR2P51116 673 aaKnown RBP eCLIP11.29□□□□□ -0.67e-15■■■■■ 29
CHD4-204ENST00000535810 CTSWP56202 376 aa11.29□□□□□ -0.6
CHD4-204ENST00000535810 RPS8P62241 208 aaKnown RBP11.29□□□□□ -0.6
CHD4-204ENST00000535810 PLCB2Q00722 1185 aa11.29□□□□□ -0.6
CHD4-204ENST00000535810 KIAA2012Q0VF49 1180 aa11.29□□□□□ -0.6
CHD4-204ENST00000535810 UBE3BQ7Z3V4 1068 aa11.29□□□□□ -0.6
CHD4-204ENST00000535810 AIDAQ96BJ3 306 aa11.29□□□□□ -0.6
CHD4-204ENST00000535810 ABHD8Q96I13 439 aa11.29□□□□□ -0.6
CHD4-204ENST00000535810 CCDC85AQ96PX6 553 aaPredicted RBP11.29□□□□□ -0.6
CHD4-204ENST00000535810 MKRN1Q9UHC7 482 aaKnown RBP11.29□□□□□ -0.6
CHD4-204ENST00000535810 HACL1Q9UJ83 578 aa11.29□□□□□ -0.6
CHD4-204ENST00000535810 E9PSI1 815 aa11.28□□□□□ -0.6
CHD4-204ENST00000535810 H7C1W4 665 aa11.28□□□□□ -0.6
CHD4-204ENST00000535810 RGS19P49795 217 aa11.28□□□□□ -0.6
CHD4-204ENST00000535810 GPSM2P81274 684 aa11.28□□□□□ -0.6
CHD4-204ENST00000535810 MLLT1Q03111 559 aaPredicted RBP11.28□□□□□ -0.6
CHD4-204ENST00000535810 GCKRQ14397 625 aa11.28□□□□□ -0.6
CHD4-204ENST00000535810 LINS1Q8NG48 757 aa11.28□□□□□ -0.6
CHD4-204ENST00000535810 RNF25Q96BH1 459 aaPredicted RBP11.28□□□□□ -0.6
CHD4-204ENST00000535810 ZNRF3Q9ULT6 936 aa11.28□□□□□ -0.6
CHD4-204ENST00000535810 NSFL1CQ9UNZ2 370 aaKnown RBP11.28□□□□□ -0.6
CHD4-204ENST00000535810 GJA3Q9Y6H8 435 aa11.28□□□□□ -0.6
CHD4-204ENST00000535810 ADAMTSL1Q8N6G6 1762 aa11.27□□□□□ -0.61
CHD4-204ENST00000535810 F6X3S4 739 aa11.27□□□□□ -0.61
CHD4-204ENST00000535810 EPHX2P34913 555 aa11.27□□□□□ -0.61
CHD4-204ENST00000535810 SCNN1DP51172 638 aa11.27□□□□□ -0.61
CHD4-204ENST00000535810 LDHDQ86WU2 507 aa11.27□□□□□ -0.61
CHD4-204ENST00000535810 TTLL11Q8NHH1 800 aa11.27□□□□□ -0.61
CHD4-204ENST00000535810 POLLQ9UGP5 575 aa11.27□□□□□ -0.61
CHD4-204ENST00000535810 MYH3P11055 1940 aa11.27□□□□□ -0.61
CHD4-204ENST00000535810 CNTNAP1P78357 1384 aa11.27□□□□□ -0.61
CHD4-204ENST00000535810 RTL9Q8NET4 1388 aa11.27□□□□□ -0.61
CHD4-204ENST00000535810 CASP7P55210 303 aa11.26□□□□□ -0.61
CHD4-204ENST00000535810 CXCL9Q07325 125 aa11.26□□□□□ -0.61
CHD4-204ENST00000535810 EAPPQ56P03 285 aaPredicted RBP11.26□□□□□ -0.61
CHD4-204ENST00000535810 BEND3Q5T5X7 828 aa11.26□□□□□ -0.61
CHD4-204ENST00000535810 TBC1D16Q8TBP0 767 aa11.26□□□□□ -0.61
CHD4-204ENST00000535810 PLA2G12BQ9BX93 195 aa11.26□□□□□ -0.61
CHD4-204ENST00000535810 GREM2Q9H772 168 aa11.26□□□□□ -0.61
CHD4-204ENST00000535810 PODXL2Q9NZ53 605 aa11.26□□□□□ -0.61
CHD4-204ENST00000535810 YDJCA8MPS7 323 aa11.25□□□□□ -0.61
CHD4-204ENST00000535810 LMOD1P29536 600 aaPredicted RBP11.25□□□□□ -0.61
CHD4-204ENST00000535810 SLFN5Q08AF3 891 aa11.25□□□□□ -0.61
CHD4-204ENST00000535810 WASHC4Q2M389 1173 aa11.25□□□□□ -0.61
CHD4-204ENST00000535810 PNMA8AQ86V59 439 aaPredicted RBP11.25□□□□□ -0.61
CHD4-204ENST00000535810 ANKRD18AQ8IVF6 992 aa11.25□□□□□ -0.61
CHD4-204ENST00000535810 PIP4P2Q8N4L2 257 aa11.25□□□□□ -0.61
CHD4-204ENST00000535810 CDCA7LQ96GN5 454 aa11.25□□□□□ -0.61
CHD4-204ENST00000535810 GPR101Q96P66 508 aaPredicted RBP11.25□□□□□ -0.61
CHD4-204ENST00000535810 CDC5LQ99459 802 aaKnown RBP11.25□□□□□ -0.61
CHD4-204ENST00000535810 TSPYL2Q9H2G4 693 aaPredicted RBP11.25□□□□□ -0.61
CHD4-204ENST00000535810 WBP1LQ9NX94 342 aa11.25□□□□□ -0.61
CHD4-204ENST00000535810 ANKIB1Q9P2G1 1089 aa11.25□□□□□ -0.61
CHD4-204ENST00000535810 C6orf229H3BNL8 230 aa11.24□□□□□ -0.61
CHD4-204ENST00000535810 RAD17O75943 681 aa11.24□□□□□ -0.61
CHD4-204ENST00000535810 UFL1O94874 794 aa11.24□□□□□ -0.61
CHD4-204ENST00000535810 PYGBP11216 843 aa11.24□□□□□ -0.61
CHD4-204ENST00000535810 EPS15P42566 896 aa11.24□□□□□ -0.61
CHD4-204ENST00000535810 LBX1P52954 281 aa11.24□□□□□ -0.61
CHD4-204ENST00000535810 CIAPIN1Q6FI81 312 aa11.24□□□□□ -0.61
CHD4-204ENST00000535810 EYA3Q99504 573 aa11.24□□□□□ -0.61
CHD4-204ENST00000535810 DBNDD1Q9H9R9 158 aa11.24□□□□□ -0.61
CHD4-204ENST00000535810 GPRC5DQ9NZD1 345 aa11.24□□□□□ -0.61
CHD4-204ENST00000535810 RIMBP2O15034 1052 aa11.23□□□□□ -0.61
CHD4-204ENST00000535810 GMPSP49915 693 aaPredicted RBP11.23□□□□□ -0.61
CHD4-204ENST00000535810 MRPL50Q8N5N7 158 aaKnown RBP11.23□□□□□ -0.61
CHD4-204ENST00000535810 BSDC1Q9NW68 430 aaPredicted RBP11.23□□□□□ -0.61
CHD4-204ENST00000535810 GGA1Q9UJY5 639 aa11.23□□□□□ -0.61
CHD4-204ENST00000535810 XDHP47989 1333 aa11.23□□□□□ -0.61
CHD4-204ENST00000535810 PASKQ96RG2 1323 aa11.23□□□□□ -0.61
CHD4-204ENST00000535810 GRM8O00222 908 aa11.22□□□□□ -0.61
CHD4-204ENST00000535810 ECE2O60344 883 aa11.22□□□□□ -0.61
CHD4-204ENST00000535810 ALDH1L1O75891 902 aa11.22□□□□□ -0.61
CHD4-204ENST00000535810 ITGBL1O95965 494 aaPredicted RBP11.22□□□□□ -0.61
CHD4-204ENST00000535810 CSF1RP07333 972 aa11.22□□□□□ -0.61
CHD4-204ENST00000535810 ITGA6P23229 1130 aa11.22□□□□□ -0.61
CHD4-204ENST00000535810 VEGFBP49765 207 aa11.22□□□□□ -0.61
CHD4-204ENST00000535810 TNIP1Q15025 636 aa11.22□□□□□ -0.61
CHD4-204ENST00000535810 DOK7Q18PE1 504 aa11.22□□□□□ -0.61
CHD4-204ENST00000535810 MAP1SQ66K74 1059 aaPredicted RBP11.22□□□□□ -0.61
CHD4-204ENST00000535810 USP50Q70EL3 339 aaPredicted RBP11.22□□□□□ -0.61
CHD4-204ENST00000535810 TRMT2AQ8IZ69 625 aaKnown RBP11.22□□□□□ -0.61
CHD4-204ENST00000535810 BBXQ8WY36 941 aaPredicted RBP11.22□□□□□ -0.61
CHD4-204ENST00000535810 SSH1Q8WYL5 1049 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms