RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 PRM3Q9NNZ6 103 aa2.44□□□□□ -2.02
COPB1-212ENST00000534771 SERTAD1Q9UHV2 236 aa2.44□□□□□ -2.02
COPB1-212ENST00000534771 TNFRSF18Q9Y5U5 241 aa2.44□□□□□ -2.02
COPB1-212ENST00000534771 RNASE1P07998 156 aaKnown RBP2.43□□□□□ -2.02
COPB1-212ENST00000534771 BRPF1P55201 1214 aaPredicted RBP2.43□□□□□ -2.02
COPB1-212ENST00000534771 PLAURQ03405 335 aa2.43□□□□□ -2.02
COPB1-212ENST00000534771 UVSSAQ2YD98 709 aa2.43□□□□□ -2.02
COPB1-212ENST00000534771 PRR23BQ6ZRT6 265 aa2.43□□□□□ -2.02
COPB1-212ENST00000534771 ZC3HAV1Q7Z2W4 902 aaKnown RBP2.43□□□□□ -2.02
COPB1-212ENST00000534771 SPRED2Q7Z698 418 aa2.43□□□□□ -2.02
COPB1-212ENST00000534771 SHISA5Q8N114 240 aa2.43□□□□□ -2.02
COPB1-212ENST00000534771 MTMR14Q8NCE2 650 aa2.43□□□□□ -2.02
COPB1-212ENST00000534771 SNRKQ9NRH2 765 aa2.43□□□□□ -2.02
COPB1-212ENST00000534771 CHIC2Q9UKJ5 165 aa2.43□□□□□ -2.02
COPB1-212ENST00000534771 SLC5A6Q9Y289 635 aa2.43□□□□□ -2.02
COPB1-212ENST00000534771 PARP3Q9Y6F1 533 aa2.43□□□□□ -2.02
COPB1-212ENST00000534771 TMEM229AB2RXF0 380 aa2.42□□□□□ -2.02
COPB1-212ENST00000534771 BACH1O14867 736 aa2.42□□□□□ -2.02
COPB1-212ENST00000534771 GPR37L1O60883 481 aa2.42□□□□□ -2.02
COPB1-212ENST00000534771 NOS2P35228 1153 aa2.42□□□□□ -2.02
COPB1-212ENST00000534771 TXLNAP40222 546 aa2.42□□□□□ -2.02
COPB1-212ENST00000534771 RTN1Q16799 776 aa2.42□□□□□ -2.02
COPB1-212ENST00000534771 SPATS1Q496A3 300 aa2.42□□□□□ -2.02
COPB1-212ENST00000534771 ATG14Q6ZNE5 492 aa2.42□□□□□ -2.02
COPB1-212ENST00000534771 LRRC69Q6ZNQ3 347 aa2.42□□□□□ -2.02
COPB1-212ENST00000534771 ZNF295-AS1Q8N0V1 137 aa2.42□□□□□ -2.02
COPB1-212ENST00000534771 L3MBTL2Q969R5 705 aa2.42□□□□□ -2.02
COPB1-212ENST00000534771 MBNL3Q9NUK0 354 aaKnown RBP2.42□□□□□ -2.02
COPB1-212ENST00000534771 DNAJB12Q9NXW2 375 aaKnown RBP2.42□□□□□ -2.02
COPB1-212ENST00000534771 RTEL1Q9NZ71 1219 aa2.42□□□□□ -2.02
COPB1-212ENST00000534771 IQSEC3Q9UPP2 1182 aaPredicted RBP2.42□□□□□ -2.02
COPB1-212ENST00000534771 EML1O00423 815 aa2.41□□□□□ -2.02
COPB1-212ENST00000534771 CPB1P15086 417 aa2.41□□□□□ -2.02
COPB1-212ENST00000534771 TEAD4Q15561 434 aa2.41□□□□□ -2.02
COPB1-212ENST00000534771 KCNMB1Q16558 191 aa2.41□□□□□ -2.02
COPB1-212ENST00000534771 ERICH6BQ5W0A0 696 aa2.41□□□□□ -2.02
COPB1-212ENST00000534771 FAM35AQ86V20 835 aa2.41□□□□□ -2.02
COPB1-212ENST00000534771 ZSWIM9Q86XI8 627 aa2.41□□□□□ -2.02
COPB1-212ENST00000534771 PLPP7Q8NBV4 271 aa2.41□□□□□ -2.02
COPB1-212ENST00000534771 LRRN4CLQ8ND94 238 aa2.41□□□□□ -2.02
COPB1-212ENST00000534771 BCL7CQ8WUZ0 217 aaPredicted RBP2.41□□□□□ -2.02
COPB1-212ENST00000534771 C7orf43Q8WVR3 580 aa2.41□□□□□ -2.02
COPB1-212ENST00000534771 ANKIB1Q9P2G1 1089 aa2.41□□□□□ -2.02
COPB1-212ENST00000534771 USP3Q9Y6I4 520 aa2.41□□□□□ -2.02
COPB1-212ENST00000534771 SFI1A8K8P3 1242 aa2.4□□□□□ -2.03
COPB1-212ENST00000534771 ZBTB42B2RXF5 422 aa2.4□□□□□ -2.03
COPB1-212ENST00000534771 SEMA3FQ13275 785 aa2.4□□□□□ -2.03
COPB1-212ENST00000534771 FAM117BQ6P1L5 589 aa2.4□□□□□ -2.03
COPB1-212ENST00000534771 CEP63Q96MT8 703 aa2.4□□□□□ -2.03
COPB1-212ENST00000534771 KCNC2Q96PR1 638 aa2.4□□□□□ -2.03
COPB1-212ENST00000534771 CD320Q9NPF0 282 aa2.4□□□□□ -2.03
COPB1-212ENST00000534771 BRD7Q9NPI1 651 aa2.4□□□□□ -2.03
COPB1-212ENST00000534771 SCHIP1Q9P0W5 487 aaPredicted RBP2.4□□□□□ -2.03
COPB1-212ENST00000534771 ZC3H7BQ9UGR2 993 aaKnown RBP2.4□□□□□ -2.03
COPB1-212ENST00000534771 ADAMTS6Q9UKP5 1117 aa2.4□□□□□ -2.03
COPB1-212ENST00000534771 ZNF232Q9UNY5 417 aa2.4□□□□□ -2.03
COPB1-212ENST00000534771 SMG5Q9UPR3 1016 aaKnown RBP2.4□□□□□ -2.03
COPB1-212ENST00000534771 TBC1D2BQ9UPU7 963 aa2.4□□□□□ -2.03
COPB1-212ENST00000534771 KCNH4Q9UQ05 1017 aa2.4□□□□□ -2.03
COPB1-212ENST00000534771 PCDHGA11Q9Y5H2 935 aa2.4□□□□□ -2.03
COPB1-212ENST00000534771 GPC6Q9Y625 555 aaPredicted RBP2.4□□□□□ -2.03
COPB1-212ENST00000534771 SERTM1A2A2V5 107 aa2.39□□□□□ -2.03
COPB1-212ENST00000534771 SART1O43290 800 aaKnown RBP2.39□□□□□ -2.03
COPB1-212ENST00000534771 LZTS3O60299 673 aaPredicted RBP2.39□□□□□ -2.03
COPB1-212ENST00000534771 KCNQ4P56696 695 aa2.39□□□□□ -2.03
COPB1-212ENST00000534771 VAC14Q08AM6 782 aa2.39□□□□□ -2.03
COPB1-212ENST00000534771 BNIP3Q12983 259 aa2.39□□□□□ -2.03
COPB1-212ENST00000534771 CPSF6Q16630 551 aaKnown RBP eCLIP2.39□□□□□ -2.03
COPB1-212ENST00000534771 WASHC4Q2M389 1173 aa2.39□□□□□ -2.03
COPB1-212ENST00000534771 SERBP1Q8NC51 408 aaKnown RBP eCLIP2.39□□□□□ -2.03
COPB1-212ENST00000534771 PI4K2BQ8TCG2 481 aa2.39□□□□□ -2.03
COPB1-212ENST00000534771 ZDHHC1Q8WTX9 485 aa2.39□□□□□ -2.03
COPB1-212ENST00000534771 SCAND2PQ9GZW5 306 aaPredicted RBP2.39□□□□□ -2.03
COPB1-212ENST00000534771 EFCC1Q9HA90 598 aa2.39□□□□□ -2.03
COPB1-212ENST00000534771 TCAF2A6NFQ2 919 aa2.38□□□□□ -2.03
COPB1-212ENST00000534771 IQCJ-SCHIP1C9J366 451 aaPredicted RBP2.38□□□□□ -2.03
COPB1-212ENST00000534771 WISP1O95388 367 aa2.38□□□□□ -2.03
COPB1-212ENST00000534771 PSME1Q06323 249 aa2.38□□□□□ -2.03
COPB1-212ENST00000534771 IRF5Q13568 498 aa2.38□□□□□ -2.03
COPB1-212ENST00000534771 NEUROD2Q15784 382 aa2.38□□□□□ -2.03
COPB1-212ENST00000534771 EML3Q32P44 896 aa2.38□□□□□ -2.03
COPB1-212ENST00000534771 C1orf53Q5VUE5 145 aa2.38□□□□□ -2.03
COPB1-212ENST00000534771 ACAD11Q709F0 780 aa2.38□□□□□ -2.03
COPB1-212ENST00000534771 MARCH10Q8NA82 808 aaPredicted RBP2.38□□□□□ -2.03
COPB1-212ENST00000534771 RHPN1Q8TCX5 695 aa2.38□□□□□ -2.03
COPB1-212ENST00000534771 LPIN3Q9BQK8 851 aa2.38□□□□□ -2.03
COPB1-212ENST00000534771 LRRC4CQ9HCJ2 640 aa2.38□□□□□ -2.03
COPB1-212ENST00000534771 NOD1Q9Y239 953 aa2.38□□□□□ -2.03
COPB1-212ENST00000534771 CHMP3Q9Y3E7 222 aa2.38□□□□□ -2.03
COPB1-212ENST00000534771 HCN4Q9Y3Q4 1203 aa2.38□□□□□ -2.03
COPB1-212ENST00000534771 SLPIP03973 132 aa2.37□□□□□ -2.03
COPB1-212ENST00000534771 TNFRSF1AP19438 455 aa2.37□□□□□ -2.03
COPB1-212ENST00000534771 FUT4P22083 530 aa2.37□□□□□ -2.03
COPB1-212ENST00000534771 SOX11P35716 441 aa2.37□□□□□ -2.03
COPB1-212ENST00000534771 GTF2IP78347 998 aa2.37□□□□□ -2.03
COPB1-212ENST00000534771 EFEMP1Q12805 493 aa2.37□□□□□ -2.03
COPB1-212ENST00000534771 SETDB1Q15047 1291 aa2.37□□□□□ -2.03
COPB1-212ENST00000534771 TBCELQ5QJ74 424 aa2.37□□□□□ -2.03
COPB1-212ENST00000534771 PERM1Q5SV97 790 aa2.37□□□□□ -2.03
COPB1-212ENST00000534771 ELMSAN1Q6PJG2 1045 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms