RNA–Protein interactions for RNA: ENST00000534283.1

RELA-223, Transcript of RELA proto-oncogene, NF-kB subunit, human

TSL 5

Gene RELA, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RELA-223	ENST00000534283	STK31	Q9BXU1	1019 aa		31.2	■■■□□ 2.59
RELA-223	ENST00000534283	RTL9	Q8NET4	1388 aa		31.19	■■■□□ 2.58
RELA-223	ENST00000534283	ECE2	O60344	883 aa		31.19	■■■□□ 2.58
RELA-223	ENST00000534283	CCDC85A	Q96PX6	553 aa	Predicted RBP	31.19	■■■□□ 2.58
RELA-223	ENST00000534283	GLIS2	Q9BZE0	524 aa	Predicted RBP	31.19	■■■□□ 2.58
RELA-223	ENST00000534283		H7C1D1	291 aa		31.18	■■■□□ 2.58
RELA-223	ENST00000534283	SLC4A2	P04920	1241 aa		31.18	■■■□□ 2.58
RELA-223	ENST00000534283	TLL2	Q9Y6L7	1015 aa		31.18	■■■□□ 2.58
RELA-223	ENST00000534283	ZNF316	A6NFI3	1004 aa	Predicted RBP	31.17	■■■□□ 2.58
RELA-223	ENST00000534283	ZC3H12C	Q9C0D7	883 aa	Known RBP	31.17	■■■□□ 2.58
RELA-223	ENST00000534283	NEURL1B	A8MQ27	555 aa		31.15	■■■□□ 2.58
RELA-223	ENST00000534283	UFL1	O94874	794 aa		31.15	■■■□□ 2.58
RELA-223	ENST00000534283	RPS12	P25398	132 aa	Known RBP	31.15	■■■□□ 2.58
RELA-223	ENST00000534283	CTSW	P56202	376 aa		31.15	■■■□□ 2.58
RELA-223	ENST00000534283	CWF19L2	Q2TBE0	894 aa	Known RBP	31.15	■■■□□ 2.58
RELA-223	ENST00000534283	SAMD7	Q7Z3H4	446 aa		31.15	■■■□□ 2.58
RELA-223	ENST00000534283	TTLL11	Q8NHH1	800 aa		31.15	■■■□□ 2.58
RELA-223	ENST00000534283	PRDM10	Q9NQV6	1147 aa		31.15	■■■□□ 2.58
RELA-223	ENST00000534283	ANKIB1	Q9P2G1	1089 aa		31.15	■■■□□ 2.58
RELA-223	ENST00000534283	GGA1	Q9UJY5	639 aa		31.15	■■■□□ 2.58
RELA-223	ENST00000534283		H7C1W4	665 aa		31.14	■■■□□ 2.58
RELA-223	ENST00000534283	ANP32C	O43423	234 aa		31.14	■■■□□ 2.58
RELA-223	ENST00000534283	EGFR	P00533	1210 aa		31.14	■■■□□ 2.58
RELA-223	ENST00000534283	VIL1	P09327	827 aa	Known RBP	31.14	■■■□□ 2.58
RELA-223	ENST00000534283	CTCF	P49711	727 aa	Predicted RBP	31.14	■■■□□ 2.58
RELA-223	ENST00000534283	CDC37L1	Q7L3B6	337 aa		31.14	■■■□□ 2.58
RELA-223	ENST00000534283	ANKRD18A	Q8IVF6	992 aa		31.14	■■■□□ 2.58
RELA-223	ENST00000534283	WDR63	Q8IWG1	891 aa		31.14	■■■□□ 2.58
RELA-223	ENST00000534283	CAPNS2	Q96L46	248 aa		31.14	■■■□□ 2.58
RELA-223	ENST00000534283	FANCI	Q9NVI1	1328 aa		31.14	■■■□□ 2.58
RELA-223	ENST00000534283	CELF2	O95319	508 aa	Known RBP	31.13	■■■□□ 2.57
RELA-223	ENST00000534283	NEXN	Q0ZGT2	675 aa		31.13	■■■□□ 2.57
RELA-223	ENST00000534283	SAPCD2	Q86UD0	394 aa		31.13	■■■□□ 2.57
RELA-223	ENST00000534283	AIDA	Q96BJ3	306 aa		31.13	■■■□□ 2.57
RELA-223	ENST00000534283	CYP4F22	Q6NT55	531 aa		31.12	■■■□□ 2.57
RELA-223	ENST00000534283	VAMP4	O75379	141 aa		31.11	■■■□□ 2.57
RELA-223	ENST00000534283	MAP2K1	Q02750	393 aa	Predicted RBP	31.11	■■■□□ 2.57
RELA-223	ENST00000534283	GREM2	Q9H772	168 aa		31.11	■■■□□ 2.57
RELA-223	ENST00000534283	XDH	P47989	1333 aa		31.1	■■■□□ 2.57
RELA-223	ENST00000534283	WTIP	A6NIX2	430 aa	Predicted RBP	31.1	■■■□□ 2.57
RELA-223	ENST00000534283	ECE1	P42892	770 aa		31.1	■■■□□ 2.57
RELA-223	ENST00000534283	FLII	Q13045	1269 aa		31.1	■■■□□ 2.57
RELA-223	ENST00000534283	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	31.1	■■■□□ 2.57
RELA-223	ENST00000534283	USP48	Q86UV5	1035 aa		31.1	■■■□□ 2.57
RELA-223	ENST00000534283	DLK2	Q6UY11	383 aa		31.09	■■■□□ 2.57
RELA-223	ENST00000534283	CDC5L	Q99459	802 aa	Known RBP	31.09	■■■□□ 2.57
RELA-223	ENST00000534283	BSDC1	Q9NW68	430 aa	Predicted RBP	31.09	■■■□□ 2.57
RELA-223	ENST00000534283	ATP2B4	P23634	1241 aa		31.08	■■■□□ 2.57
RELA-223	ENST00000534283	CASP7	P55210	303 aa		31.08	■■■□□ 2.57
RELA-223	ENST00000534283	GCKR	Q14397	625 aa		31.08	■■■□□ 2.57
RELA-223	ENST00000534283	HHIPL1	Q96JK4	782 aa		31.08	■■■□□ 2.57
RELA-223	ENST00000534283	MINPP1	Q9UNW1	487 aa		31.08	■■■□□ 2.57
RELA-223	ENST00000534283	SALL2	Q9Y467	1007 aa	Predicted RBP	31.08	■■■□□ 2.57
RELA-223	ENST00000534283	HSPA8	P11142	646 aa	Known RBP	31.07	■■■□□ 2.56
RELA-223	ENST00000534283	UBE3B	Q7Z3V4	1068 aa		31.07	■■■□□ 2.56
RELA-223	ENST00000534283	PLA2G12B	Q9BX93	195 aa		31.07	■■■□□ 2.56
RELA-223	ENST00000534283	SPINK5	Q9NQ38	1064 aa	Predicted RBP	31.07	■■■□□ 2.56
RELA-223	ENST00000534283	LBX1	P52954	281 aa		31.06	■■■□□ 2.56
RELA-223	ENST00000534283	EXOSC9	Q06265	439 aa	Known RBP	31.06	■■■□□ 2.56
RELA-223	ENST00000534283	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	31.06	■■■□□ 2.56
RELA-223	ENST00000534283	CAPN15	O75808	1086 aa		31.05	■■■□□ 2.56
RELA-223	ENST00000534283	RBM26	Q5T8P6	1007 aa	Known RBP	31.05	■■■□□ 2.56
RELA-223	ENST00000534283	DNAAF4	Q8WXU2	420 aa		31.05	■■■□□ 2.56
RELA-223	ENST00000534283	GML	Q99445	158 aa		31.05	■■■□□ 2.56
RELA-223	ENST00000534283	MAP2K2	P36507	400 aa		31.04	■■■□□ 2.56
RELA-223	ENST00000534283	ZNF280A	P59817	542 aa	Predicted RBP	31.04	■■■□□ 2.56
RELA-223	ENST00000534283	RSBN1L	Q6PCB5	846 aa	Predicted RBP	31.04	■■■□□ 2.56
RELA-223	ENST00000534283	ZNF609	O15014	1411 aa		31.04	■■■□□ 2.56
RELA-223	ENST00000534283		G3V3G9	751 aa		31.03	■■■□□ 2.56
RELA-223	ENST00000534283	CSF1R	P07333	972 aa		31.03	■■■□□ 2.56
RELA-223	ENST00000534283	FKBP5	Q13451	457 aa	Predicted RBP	31.03	■■■□□ 2.56
RELA-223	ENST00000534283	DCAF8	Q5TAQ9	597 aa		31.03	■■■□□ 2.56
RELA-223	ENST00000534283	LINS1	Q8NG48	757 aa		31.03	■■■□□ 2.56
RELA-223	ENST00000534283	ZNF408	Q9H9D4	720 aa		31.03	■■■□□ 2.56
RELA-223	ENST00000534283	AOC2	O75106	756 aa		31.02	■■■□□ 2.56
RELA-223	ENST00000534283	GRM1	Q13255	1194 aa		31.02	■■■□□ 2.56
RELA-223	ENST00000534283	KRT26	Q7Z3Y9	468 aa		31.02	■■■□□ 2.56
RELA-223	ENST00000534283	PODN	Q7Z5L7	613 aa		31.02	■■■□□ 2.56
RELA-223	ENST00000534283	AGBL3	Q8NEM8	1001 aa		31.02	■■■□□ 2.56
RELA-223	ENST00000534283	KIF4B	Q2VIQ3	1234 aa		31.01	■■■□□ 2.55
RELA-223	ENST00000534283	THSD7B	Q9C0I4	1608 aa		31	■■■□□ 2.55
RELA-223	ENST00000534283	ASTN2	O75129	1339 aa	Predicted RBP	30.99	■■■□□ 2.55
RELA-223	ENST00000534283	CCT4	P50991	539 aa	Known RBP	30.99	■■■□□ 2.55
RELA-223	ENST00000534283	DCPS	Q96C86	337 aa	Known RBP	30.99	■■■□□ 2.55
RELA-223	ENST00000534283	MYH16	Q9H6N6	1097 aa		30.99	■■■□□ 2.55
RELA-223	ENST00000534283	MED23	Q9ULK4	1368 aa		30.98	■■■□□ 2.55
RELA-223	ENST00000534283	ADM5	C9JUS6	153 aa		30.98	■■■□□ 2.55
RELA-223	ENST00000534283	TRPM7	Q96QT4	1865 aa		30.97	■■■□□ 2.55
RELA-223	ENST00000534283	USP17L3	A6NCW0	530 aa		30.97	■■■□□ 2.55
RELA-223	ENST00000534283	USP17L4	A6NCW7	530 aa		30.97	■■■□□ 2.55
RELA-223	ENST00000534283	ITGA6	P23229	1130 aa		30.97	■■■□□ 2.55
RELA-223	ENST00000534283	FAM161A	Q3B820	660 aa		30.97	■■■□□ 2.55
RELA-223	ENST00000534283	USP17L1	Q7RTZ2	530 aa		30.97	■■■□□ 2.55
RELA-223	ENST00000534283	SCN9A	Q15858	1988 aa		30.97	■■■□□ 2.55
RELA-223	ENST00000534283	TXNRD3	Q86VQ6	643 aa		30.96	■■■□□ 2.55
RELA-223	ENST00000534283	IGHMBP2	P38935	993 aa	Known RBP	30.95	■■■□□ 2.55
RELA-223	ENST00000534283	BEND3	Q5T5X7	828 aa		30.95	■■■□□ 2.55
RELA-223	ENST00000534283	GGA3	Q9NZ52	723 aa		30.95	■■■□□ 2.55
RELA-223	ENST00000534283	LEMD3	Q9Y2U8	911 aa		30.95	■■■□□ 2.55
RELA-223	ENST00000534283		F6X3S4	739 aa		30.94	■■■□□ 2.54

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