RNA–Protein interactions for RNA: ENST00000534204.1

KNL1-212, Transcript of kinetochore scaffold 1, humanhuman

TSL 4

Gene KNL1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-212ENST00000534204 ARMC5Q96C12 935 aa16.14■□□□□ 0.17
KNL1-212ENST00000534204 RRP7AQ9Y3A4 280 aaKnown RBP16.14■□□□□ 0.17
KNL1-212ENST00000534204 HCLS1P14317 486 aaPredicted RBP16.13■□□□□ 0.17
KNL1-212ENST00000534204 MYL6BP14649 208 aa16.13■□□□□ 0.17
KNL1-212ENST00000534204 WASHC4Q2M389 1173 aa16.13■□□□□ 0.17
KNL1-212ENST00000534204 UTP14AQ9BVJ6 771 aaKnown RBP16.13■□□□□ 0.17
KNL1-212ENST00000534204 TRIM17Q9Y577 477 aa16.13■□□□□ 0.17
KNL1-212ENST00000534204 A0A0C4DFX4 3053 aa16.13■□□□□ 0.17
KNL1-212ENST00000534204 RIMBP2O15034 1052 aa16.12■□□□□ 0.17
KNL1-212ENST00000534204 SCARF1Q14162 830 aa16.12■□□□□ 0.17
KNL1-212ENST00000534204 DOK7Q18PE1 504 aa16.12■□□□□ 0.17
KNL1-212ENST00000534204 PRAMEF18Q5VWM3 479 aa16.12■□□□□ 0.17
KNL1-212ENST00000534204 PITPNM2Q9BZ72 1349 aa16.12■□□□□ 0.17
KNL1-212ENST00000534204 H0YGN5 161 aa16.11■□□□□ 0.17
KNL1-212ENST00000534204 MKRN3Q13064 507 aaKnown RBP16.11■□□□□ 0.17
KNL1-212ENST00000534204 PDIA6Q15084 440 aa16.11■□□□□ 0.17
KNL1-212ENST00000534204 GMLQ99445 158 aa16.11■□□□□ 0.17
KNL1-212ENST00000534204 PTPN22Q9Y2R2 807 aa16.11■□□□□ 0.17
KNL1-212ENST00000534204 ZSWIM8A7E2V4 1837 aa16.1■□□□□ 0.17
KNL1-212ENST00000534204 EIF4A1P60842 406 aaKnown RBP16.1■□□□□ 0.17
KNL1-212ENST00000534204 GPSM2P81274 684 aa16.1■□□□□ 0.17
KNL1-212ENST00000534204 TAF7Q15545 349 aaPredicted RBP16.1■□□□□ 0.17
KNL1-212ENST00000534204 CC2D1BQ5T0F9 858 aaKnown RBP16.1■□□□□ 0.17
KNL1-212ENST00000534204 SLC17A8Q8NDX2 589 aa16.1■□□□□ 0.17
KNL1-212ENST00000534204 CELF1Q92879 486 aaKnown RBP16.1■□□□□ 0.17
KNL1-212ENST00000534204 EIF4G2P78344 907 aaKnown RBP eCLIP16.09■□□□□ 0.17
KNL1-212ENST00000534204 DDX46Q7L014 1031 aaKnown RBP16.09■□□□□ 0.17
KNL1-212ENST00000534204 TMC4Q7Z404 712 aa16.09■□□□□ 0.17
KNL1-212ENST00000534204 NLRP10Q86W26 655 aa16.09■□□□□ 0.17
KNL1-212ENST00000534204 THUMPD2Q9BTF0 503 aaKnown RBP16.09■□□□□ 0.17
KNL1-212ENST00000534204 PRO3102Q9H379 93 aa16.09■□□□□ 0.17
KNL1-212ENST00000534204 PTPN12Q05209 780 aaKnown RBP16.08■□□□□ 0.16
KNL1-212ENST00000534204 SREBF2Q12772 1141 aa16.08■□□□□ 0.16
KNL1-212ENST00000534204 NSFL1CQ9UNZ2 370 aaKnown RBP16.08■□□□□ 0.16
KNL1-212ENST00000534204 LAMA3Q16787 3333 aa16.07■□□□□ 0.16
KNL1-212ENST00000534204 HTATSF1O43719 755 aaKnown RBP16.07■□□□□ 0.16
KNL1-212ENST00000534204 PROSER3Q2NL68 480 aa16.07■□□□□ 0.16
KNL1-212ENST00000534204 SPRYD7Q5W111 196 aa16.07■□□□□ 0.16
KNL1-212ENST00000534204 TBC1D16Q8TBP0 767 aa16.07■□□□□ 0.16
KNL1-212ENST00000534204 RTF1Q92541 710 aaKnown RBP16.07■□□□□ 0.16
KNL1-212ENST00000534204 ZNF333Q96JL9 665 aa16.07■□□□□ 0.16
KNL1-212ENST00000534204 RBM27Q9P2N5 1060 aaKnown RBP16.07■□□□□ 0.16
KNL1-212ENST00000534204 ERBB4Q15303 1308 aa16.07■□□□□ 0.16
KNL1-212ENST00000534204 OTOFQ9HC10 1997 aa16.07■□□□□ 0.16
KNL1-212ENST00000534204 IGF2BP3O00425 579 aaKnown RBP eCLIP16.06■□□□□ 0.16
KNL1-212ENST00000534204 CHRDL2Q6WN34 429 aa16.06■□□□□ 0.16
KNL1-212ENST00000534204 MYOZ2Q9NPC6 264 aa16.06■□□□□ 0.16
KNL1-212ENST00000534204 SSC5DA1L4H1 1573 aa16.05■□□□□ 0.16
KNL1-212ENST00000534204 NBPF9Q3BBW0 867 aa16.05■□□□□ 0.16
KNL1-212ENST00000534204 LDLRAD1Q5T700 205 aa16.05■□□□□ 0.16
KNL1-212ENST00000534204 RSBN1LQ6PCB5 846 aaPredicted RBP16.05■□□□□ 0.16
KNL1-212ENST00000534204 IFNL1Q8IU54 200 aa16.05■□□□□ 0.16
KNL1-212ENST00000534204 AGBL3Q8NEM8 1001 aa16.05■□□□□ 0.16
KNL1-212ENST00000534204 CD99L2Q8TCZ2 262 aa16.05■□□□□ 0.16
KNL1-212ENST00000534204 ECM29Q5VYK3 1845 aa16.05■□□□□ 0.16
KNL1-212ENST00000534204 SH3TC1Q8TE82 1336 aa16.04■□□□□ 0.16
KNL1-212ENST00000534204 C6orf229H3BNL8 230 aa16.04■□□□□ 0.16
KNL1-212ENST00000534204 ANXA1P04083 346 aa16.04■□□□□ 0.16
KNL1-212ENST00000534204 TIMELESSQ9UNS1 1208 aa16.04■□□□□ 0.16
KNL1-212ENST00000534204 ALDH1A1P00352 501 aa16.02■□□□□ 0.16
KNL1-212ENST00000534204 SF3B3Q15393 1217 aaKnown RBP16.02■□□□□ 0.16
KNL1-212ENST00000534204 NECTIN2Q92692 538 aa16.02■□□□□ 0.16
KNL1-212ENST00000534204 ZNF428Q96B54 188 aa16.02■□□□□ 0.16
KNL1-212ENST00000534204 PODXL2Q9NZ53 605 aa16.02■□□□□ 0.16
KNL1-212ENST00000534204 FZD1Q9UP38 647 aa16.02■□□□□ 0.16
KNL1-212ENST00000534204 USP17L8P0C7I0 530 aa16.01■□□□□ 0.15
KNL1-212ENST00000534204 EYA3Q99504 573 aa16.01■□□□□ 0.15
KNL1-212ENST00000534204 TRMT112Q9UI30 125 aaKnown RBP16.01■□□□□ 0.15
KNL1-212ENST00000534204 UNC80Q8N2C7 3258 aa16■□□□□ 0.15
KNL1-212ENST00000534204 CRHR2Q13324 411 aa16■□□□□ 0.15
KNL1-212ENST00000534204 TCIRG1Q13488 830 aa16■□□□□ 0.15
KNL1-212ENST00000534204 TTLL12Q14166 644 aaPredicted RBP16■□□□□ 0.15
KNL1-212ENST00000534204 ERO1AQ96HE7 468 aa16■□□□□ 0.15
KNL1-212ENST00000534204 SPEF2Q9C093 1822 aa16■□□□□ 0.15
KNL1-212ENST00000534204 SOX1O00570 391 aaPredicted RBP15.99■□□□□ 0.15
KNL1-212ENST00000534204 WNT10BO00744 389 aa15.99■□□□□ 0.15
KNL1-212ENST00000534204 MNX1P50219 401 aaPredicted RBP15.99■□□□□ 0.15
KNL1-212ENST00000534204 SHISA4Q96DD7 197 aa15.99■□□□□ 0.15
KNL1-212ENST00000534204 MANSC4A6NHS7 340 aaPredicted RBP15.98■□□□□ 0.15
KNL1-212ENST00000534204 GJA5P36382 358 aa15.98■□□□□ 0.15
KNL1-212ENST00000534204 PRKG1Q13976 671 aa15.98■□□□□ 0.15
KNL1-212ENST00000534204 PNISRQ8TF01 805 aaKnown RBP15.98■□□□□ 0.15
KNL1-212ENST00000534204 EFCC1Q9HA90 598 aa15.98■□□□□ 0.15
KNL1-212ENST00000534204 ALPK3Q96L96 1907 aa15.98■□□□□ 0.15
KNL1-212ENST00000534204 MAP3K11Q16584 847 aa15.97■□□□□ 0.15
KNL1-212ENST00000534204 HSP90AB3PQ58FF7 597 aa15.97■□□□□ 0.15
KNL1-212ENST00000534204 WNK4Q96J92 1243 aa15.97■□□□□ 0.15
KNL1-212ENST00000534204 CLMNQ96JQ2 1002 aa15.97■□□□□ 0.15
KNL1-212ENST00000534204 PTPN18Q99952 460 aa15.97■□□□□ 0.15
KNL1-212ENST00000534204 TMEM106CQ9BVX2 250 aa15.97■□□□□ 0.15
KNL1-212ENST00000534204 MXD3Q9BW11 206 aa15.97■□□□□ 0.15
KNL1-212ENST00000534204 ZC3H12CQ9C0D7 883 aaKnown RBP15.97■□□□□ 0.15
KNL1-212ENST00000534204 PTCH2Q9Y6C5 1203 aa15.97■□□□□ 0.15
KNL1-212ENST00000534204 UFL1O94874 794 aa15.96■□□□□ 0.15
KNL1-212ENST00000534204 ZBTB48P10074 688 aaPredicted RBP15.96■□□□□ 0.15
KNL1-212ENST00000534204 INHBEP58166 350 aa15.96■□□□□ 0.15
KNL1-212ENST00000534204 COPS6Q7L5N1 327 aa15.96■□□□□ 0.15
KNL1-212ENST00000534204 ZBED3Q96IU2 234 aaPredicted RBP15.96■□□□□ 0.15
KNL1-212ENST00000534204 WTIPA6NIX2 430 aaPredicted RBP15.95■□□□□ 0.14
KNL1-212ENST00000534204 U2AF1L5P0DN76 240 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 181.3 ms