RNA–Protein interactions for RNA: ENST00000534010.1

SDHD-208, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 2

Gene SDHD, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-208ENST00000534010 WASHC4Q2M389 1173 aa13.81□□□□□ -0.2
SDHD-208ENST00000534010 USP50Q70EL3 339 aaPredicted RBP13.81□□□□□ -0.2
SDHD-208ENST00000534010 TMX4Q9H1E5 349 aaPredicted RBP13.81□□□□□ -0.2
SDHD-208ENST00000534010 MINPP1Q9UNW1 487 aa13.81□□□□□ -0.2
SDHD-208ENST00000534010 NSFL1CQ9UNZ2 370 aaKnown RBP13.81□□□□□ -0.2
SDHD-208ENST00000534010 POLR2AP24928 1970 aaKnown RBP13.8□□□□□ -0.2
SDHD-208ENST00000534010 ALDH1L1O75891 902 aa13.8□□□□□ -0.2
SDHD-208ENST00000534010 CIAPIN1Q6FI81 312 aa13.8□□□□□ -0.2
SDHD-208ENST00000534010 ANKRD18AQ8IVF6 992 aa13.8□□□□□ -0.2
SDHD-208ENST00000534010 DPF2Q92785 391 aa13.8□□□□□ -0.2
SDHD-208ENST00000534010 CDCA7LQ96GN5 454 aa13.8□□□□□ -0.2
SDHD-208ENST00000534010 KAZALD1Q96I82 304 aa13.8□□□□□ -0.2
SDHD-208ENST00000534010 CREBZFQ9NS37 354 aa13.8□□□□□ -0.2
SDHD-208ENST00000534010 XDHP47989 1333 aa13.8□□□□□ -0.2
SDHD-208ENST00000534010 THSD7BQ9C0I4 1608 aa13.79□□□□□ -0.2
SDHD-208ENST00000534010 WTIPA6NIX2 430 aaPredicted RBP13.79□□□□□ -0.2
SDHD-208ENST00000534010 GMPSP49915 693 aaPredicted RBP13.79□□□□□ -0.2
SDHD-208ENST00000534010 HIRAP54198 1017 aaPredicted RBP13.79□□□□□ -0.2
SDHD-208ENST00000534010 EPHA10Q5JZY3 1008 aa13.79□□□□□ -0.2
SDHD-208ENST00000534010 SSH1Q8WYL5 1049 aa13.79□□□□□ -0.2
SDHD-208ENST00000534010 CDC5LQ99459 802 aaKnown RBP13.79□□□□□ -0.2
SDHD-208ENST00000534010 KCNQ5Q9NR82 932 aa13.79□□□□□ -0.2
SDHD-208ENST00000534010 ADARB2Q9NS39 739 aaKnown RBP13.79□□□□□ -0.2
SDHD-208ENST00000534010 MED23Q9ULK4 1368 aa13.79□□□□□ -0.2
SDHD-208ENST00000534010 PSMD14O00487 310 aa13.78□□□□□ -0.2
SDHD-208ENST00000534010 VIL1P09327 827 aaKnown RBP13.78□□□□□ -0.2
SDHD-208ENST00000534010 CT47B1P0C2W7 299 aaPredicted RBP13.78□□□□□ -0.2
SDHD-208ENST00000534010 TNIP1Q15025 636 aa13.78□□□□□ -0.2
SDHD-208ENST00000534010 FAM161AQ3B820 660 aa13.78□□□□□ -0.2
SDHD-208ENST00000534010 ALDH1L2Q3SY69 923 aa13.78□□□□□ -0.2
SDHD-208ENST00000534010 GPR101Q96P66 508 aaPredicted RBP13.78□□□□□ -0.2
SDHD-208ENST00000534010 GMLQ99445 158 aa13.78□□□□□ -0.2
SDHD-208ENST00000534010 EYA3Q99504 573 aa13.78□□□□□ -0.2
SDHD-208ENST00000534010 GJA3Q9Y6H8 435 aa13.78□□□□□ -0.2
SDHD-208ENST00000534010 PTPRCP08575 1304 aa13.78□□□□□ -0.2
SDHD-208ENST00000534010 GRM8O00222 908 aa13.77□□□□□ -0.21
SDHD-208ENST00000534010 ECE2O60344 883 aa13.77□□□□□ -0.21
SDHD-208ENST00000534010 RAD17O75943 681 aa13.77□□□□□ -0.21
SDHD-208ENST00000534010 ITGA6P23229 1130 aa13.77□□□□□ -0.21
SDHD-208ENST00000534010 CNTROBQ8N137 903 aa13.77□□□□□ -0.21
SDHD-208ENST00000534010 ZC3H15Q8WU90 426 aaKnown RBP13.77□□□□□ -0.21
SDHD-208ENST00000534010 CCDC85AQ96PX6 553 aaPredicted RBP13.77□□□□□ -0.21
SDHD-208ENST00000534010 DBNDD1Q9H9R9 158 aa13.77□□□□□ -0.21
SDHD-208ENST00000534010 GGA1Q9UJY5 639 aa13.77□□□□□ -0.21
SDHD-208ENST00000534010 CNTNAP1P78357 1384 aa13.76□□□□□ -0.21
SDHD-208ENST00000534010 SHTN1A0MZ66 631 aa13.76□□□□□ -0.21
SDHD-208ENST00000534010 C6orf229H3BNL8 230 aa13.76□□□□□ -0.21
SDHD-208ENST00000534010 UFL1O94874 794 aa13.76□□□□□ -0.21
SDHD-208ENST00000534010 ATP2B4P23634 1241 aa13.76□□□□□ -0.21
SDHD-208ENST00000534010 RPS12P25398 132 aaKnown RBP13.76□□□□□ -0.21
SDHD-208ENST00000534010 RABL6Q3YEC7 729 aaPredicted RBP13.76□□□□□ -0.21
SDHD-208ENST00000534010 MAP1SQ66K74 1059 aaPredicted RBP13.76□□□□□ -0.21
SDHD-208ENST00000534010 C15orf52Q6ZUT6 534 aaKnown RBP13.76□□□□□ -0.21
SDHD-208ENST00000534010 LMOD1P29536 600 aaPredicted RBP13.75□□□□□ -0.21
SDHD-208ENST00000534010 CCT4P50991 539 aaKnown RBP13.75□□□□□ -0.21
SDHD-208ENST00000534010 EAPPQ56P03 285 aaPredicted RBP13.75□□□□□ -0.21
SDHD-208ENST00000534010 PODNQ7Z5L7 613 aa13.75□□□□□ -0.21
SDHD-208ENST00000534010 TRPM4Q8TD43 1214 aa13.75□□□□□ -0.21
SDHD-208ENST00000534010 ZC3H12CQ9C0D7 883 aaKnown RBP13.75□□□□□ -0.21
SDHD-208ENST00000534010 SRCIN1Q9C0H9 1055 aa13.75□□□□□ -0.21
SDHD-208ENST00000534010 LEMD3Q9Y2U8 911 aa13.75□□□□□ -0.21
SDHD-208ENST00000534010 RASSF10A6NK89 507 aa13.74□□□□□ -0.21
SDHD-208ENST00000534010 RIMBP2O15034 1052 aa13.74□□□□□ -0.21
SDHD-208ENST00000534010 NBPF7P0C2Y1 421 aaPredicted RBP13.74□□□□□ -0.21
SDHD-208ENST00000534010 ZNF280AP59817 542 aaPredicted RBP13.74□□□□□ -0.21
SDHD-208ENST00000534010 DOK7Q18PE1 504 aa13.74□□□□□ -0.21
SDHD-208ENST00000534010 TXNRD3Q86VQ6 643 aa13.74□□□□□ -0.21
SDHD-208ENST00000534010 ANKIB1Q9P2G1 1089 aa13.74□□□□□ -0.21
SDHD-208ENST00000534010 CNOT7Q9UIV1 285 aaKnown RBP13.74□□□□□ -0.21
SDHD-208ENST00000534010 ZBTB12Q9Y330 459 aaPredicted RBP13.74□□□□□ -0.21
SDHD-208ENST00000534010 TMEM88BA6NKF7 163 aa13.73□□□□□ -0.21
SDHD-208ENST00000534010 EGFRP00533 1210 aa13.73□□□□□ -0.21
SDHD-208ENST00000534010 CST9Q5W186 159 aa13.73□□□□□ -0.21
SDHD-208ENST00000534010 AGBL3Q8NEM8 1001 aa13.73□□□□□ -0.21
SDHD-208ENST00000534010 SUCLG2Q96I99 432 aa13.73□□□□□ -0.21
SDHD-208ENST00000534010 IGHMBP2P38935 993 aaKnown RBP13.72□□□□□ -0.21
SDHD-208ENST00000534010 CHRNDQ07001 517 aa13.72□□□□□ -0.21
SDHD-208ENST00000534010 LMBR1LQ6UX01 489 aa13.72□□□□□ -0.21
SDHD-208ENST00000534010 MICALL2Q8IY33 904 aa13.72□□□□□ -0.21
SDHD-208ENST00000534010 ANKRD44Q8N8A2 993 aa13.72□□□□□ -0.21
SDHD-208ENST00000534010 USP44Q9H0E7 712 aa13.72□□□□□ -0.21
SDHD-208ENST00000534010 ZNF804BA4D1E1 1349 aa13.71□□□□□ -0.21
SDHD-208ENST00000534010 ANKRD18BA2A2Z9 1011 aa13.71□□□□□ -0.21
SDHD-208ENST00000534010 KLRK1P26718 216 aa13.71□□□□□ -0.21
SDHD-208ENST00000534010 FMR1Q06787 632 aaKnown RBP eCLIP13.71□□□□□ -0.21
SDHD-208ENST00000534010 DACT2Q5SW24 774 aa13.71□□□□□ -0.21
SDHD-208ENST00000534010 RSBN1LQ6PCB5 846 aaPredicted RBP13.71□□□□□ -0.21
SDHD-208ENST00000534010 MIER1Q8N108 512 aa13.71□□□□□ -0.21
SDHD-208ENST00000534010 ANKRD2Q9GZV1 360 aa13.71□□□□□ -0.21
SDHD-208ENST00000534010 ARAP2Q8WZ64 1704 aa13.7□□□□□ -0.22
SDHD-208ENST00000534010 ECM29Q5VYK3 1845 aa13.7□□□□□ -0.22
SDHD-208ENST00000534010 RARSP54136 660 aaKnown RBP13.7□□□□□ -0.22
SDHD-208ENST00000534010 IFIT5Q13325 482 aaKnown RBP13.7□□□□□ -0.22
SDHD-208ENST00000534010 COA1Q9GZY4 146 aa13.7□□□□□ -0.22
SDHD-208ENST00000534010 CLEC11AQ9Y240 323 aa13.7□□□□□ -0.22
SDHD-208ENST00000534010 USP17L3A6NCW0 530 aa13.69□□□□□ -0.22
SDHD-208ENST00000534010 USP17L4A6NCW7 530 aa13.69□□□□□ -0.22
SDHD-208ENST00000534010 TRAF5O00463 557 aa13.69□□□□□ -0.22
SDHD-208ENST00000534010 STRIP1Q5VSL9 837 aa13.69□□□□□ -0.22
SDHD-208ENST00000534010 USP17L1Q7RTZ2 530 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 200.8 ms