RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 CSRNP1Q96S65 589 aa16.98■□□□□ 0.31
COPB1-209ENST00000533096 ISCA1Q9BUE6 129 aa16.98■□□□□ 0.31
COPB1-209ENST00000533096 NUP98P52948 1817 aa16.98■□□□□ 0.31
COPB1-209ENST00000533096 SCARF1Q14162 830 aa16.97■□□□□ 0.31
COPB1-209ENST00000533096 RIC3Q7Z5B4 369 aa16.97■□□□□ 0.31
COPB1-209ENST00000533096 SEC31BQ9NQW1 1179 aa16.97■□□□□ 0.31
COPB1-209ENST00000533096 DBF4Q9UBU7 674 aaPredicted RBP16.97■□□□□ 0.31
COPB1-209ENST00000533096 SCAF8Q9UPN6 1271 aaKnown RBP16.97■□□□□ 0.31
COPB1-209ENST00000533096 UFL1O94874 794 aa16.96■□□□□ 0.31
COPB1-209ENST00000533096 GGA3Q9NZ52 723 aa16.96■□□□□ 0.31
COPB1-209ENST00000533096 RTL9Q8NET4 1388 aa16.95■□□□□ 0.3
COPB1-209ENST00000533096 ELL2O00472 640 aaPredicted RBP16.95■□□□□ 0.3
COPB1-209ENST00000533096 VIL1P09327 827 aaKnown RBP16.95■□□□□ 0.3
COPB1-209ENST00000533096 ANGEL2Q5VTE6 544 aaKnown RBP16.95■□□□□ 0.3
COPB1-209ENST00000533096 DUSP27Q5VZP5 1158 aa16.95■□□□□ 0.3
COPB1-209ENST00000533096 CDCA5Q96FF9 252 aa16.95■□□□□ 0.3
COPB1-209ENST00000533096 HYPKQ9NX55 129 aa16.95■□□□□ 0.3
COPB1-209ENST00000533096 PRAMEF18Q5VWM3 479 aa16.94■□□□□ 0.3
COPB1-209ENST00000533096 GGA1Q9UJY5 639 aa16.94■□□□□ 0.3
COPB1-209ENST00000533096 TRIM35Q9UPQ4 493 aa16.94■□□□□ 0.3
COPB1-209ENST00000533096 LAMB4A4D0S4 1761 aa16.93■□□□□ 0.3
COPB1-209ENST00000533096 UBE2Q2LH0YL09 131 aa16.93■□□□□ 0.3
COPB1-209ENST00000533096 MYD88Q99836 296 aa16.93■□□□□ 0.3
COPB1-209ENST00000533096 SAGE1Q9NXZ1 904 aa16.93■□□□□ 0.3
COPB1-209ENST00000533096 KDM3BQ7LBC6 1761 aa16.92■□□□□ 0.3
COPB1-209ENST00000533096 TTLL12Q14166 644 aaPredicted RBP16.92■□□□□ 0.3
COPB1-209ENST00000533096 RALBP1Q15311 655 aa16.92■□□□□ 0.3
COPB1-209ENST00000533096 MOB2Q70IA6 237 aa16.92■□□□□ 0.3
COPB1-209ENST00000533096 PHAXQ9H814 394 aaKnown RBP16.92■□□□□ 0.3
COPB1-209ENST00000533096 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.92■□□□□ 0.3
COPB1-209ENST00000533096 TBC1D8O95759 1140 aa16.91■□□□□ 0.3
COPB1-209ENST00000533096 SLC10A3P09131 477 aa16.91■□□□□ 0.3
COPB1-209ENST00000533096 GOLGA2Q08379 1002 aa16.91■□□□□ 0.3
COPB1-209ENST00000533096 TRIM28Q13263 835 aaKnown RBP16.91■□□□□ 0.3
COPB1-209ENST00000533096 WDR43Q15061 677 aaKnown RBP eCLIP16.91■□□□□ 0.3
COPB1-209ENST00000533096 RSBN1LQ6PCB5 846 aaPredicted RBP16.91■□□□□ 0.3
COPB1-209ENST00000533096 ZBTB38Q8NAP3 1195 aaPredicted RBP16.91■□□□□ 0.3
COPB1-209ENST00000533096 FBXW7Q969H0 707 aa16.91■□□□□ 0.3
COPB1-209ENST00000533096 RUNDC1Q96C34 613 aa16.91■□□□□ 0.3
COPB1-209ENST00000533096 HDAC9Q9UKV0 1011 aa16.91■□□□□ 0.3
COPB1-209ENST00000533096 WTIPA6NIX2 430 aaPredicted RBP16.9■□□□□ 0.3
COPB1-209ENST00000533096 USP17L8P0C7I0 530 aa16.9■□□□□ 0.3
COPB1-209ENST00000533096 MKRN3Q13064 507 aaKnown RBP16.9■□□□□ 0.3
COPB1-209ENST00000533096 CTU1Q7Z7A3 348 aaKnown RBP16.9■□□□□ 0.3
COPB1-209ENST00000533096 ADAMTS8Q9UP79 889 aa16.9■□□□□ 0.3
COPB1-209ENST00000533096 HSP90B1P14625 803 aaKnown RBP16.89■□□□□ 0.29
COPB1-209ENST00000533096 ZNF280AP59817 542 aaPredicted RBP16.89■□□□□ 0.29
COPB1-209ENST00000533096 CCDC152Q4G0S7 254 aa16.89■□□□□ 0.29
COPB1-209ENST00000533096 AGBL3Q8NEM8 1001 aa16.89■□□□□ 0.29
COPB1-209ENST00000533096 MYOZ2Q9NPC6 264 aa16.89■□□□□ 0.29
COPB1-209ENST00000533096 PODXL2Q9NZ53 605 aa16.89■□□□□ 0.29
COPB1-209ENST00000533096 THSD7BQ9C0I4 1608 aa16.88■□□□□ 0.29
COPB1-209ENST00000533096 DDX10Q13206 875 aaKnown RBP16.88■□□□□ 0.29
COPB1-209ENST00000533096 RASAL3Q86YV0 1011 aa16.88■□□□□ 0.29
COPB1-209ENST00000533096 ANKRD18AQ8IVF6 992 aa16.88■□□□□ 0.29
COPB1-209ENST00000533096 MXD3Q9BW11 206 aa16.88■□□□□ 0.29
COPB1-209ENST00000533096 MBIPQ9NS73 344 aa16.88■□□□□ 0.29
COPB1-209ENST00000533096 TRPM7Q96QT4 1865 aa16.88■□□□□ 0.29
COPB1-209ENST00000533096 CASP8AP2Q9UKL3 1982 aa16.88■□□□□ 0.29
COPB1-209ENST00000533096 USP17L3A6NCW0 530 aa16.87■□□□□ 0.29
COPB1-209ENST00000533096 USP17L4A6NCW7 530 aa16.87■□□□□ 0.29
COPB1-209ENST00000533096 PDE8AO60658 829 aa16.87■□□□□ 0.29
COPB1-209ENST00000533096 HOXB7P09629 217 aa16.87■□□□□ 0.29
COPB1-209ENST00000533096 PRKG1Q13976 671 aa16.87■□□□□ 0.29
COPB1-209ENST00000533096 NBPF9Q3BBW0 867 aa16.87■□□□□ 0.29
COPB1-209ENST00000533096 USP17L1Q7RTZ2 530 aa16.87■□□□□ 0.29
COPB1-209ENST00000533096 DUOX1Q9NRD9 1551 aa16.86■□□□□ 0.29
COPB1-209ENST00000533096 ATP2B4P23634 1241 aa16.86■□□□□ 0.29
COPB1-209ENST00000533096 REM2Q8IYK8 340 aaPredicted RBP16.86■□□□□ 0.29
COPB1-209ENST00000533096 HPS5Q9UPZ3 1129 aa16.86■□□□□ 0.29
COPB1-209ENST00000533096 PCCAP05165 728 aaPredicted RBP16.85■□□□□ 0.29
COPB1-209ENST00000533096 CCDC191Q8NCU4 936 aa16.85■□□□□ 0.29
COPB1-209ENST00000533096 ZNF296Q8WUU4 475 aaPredicted RBP16.85■□□□□ 0.29
COPB1-209ENST00000533096 CWC25Q9NXE8 425 aaPredicted RBP16.85■□□□□ 0.29
COPB1-209ENST00000533096 DLG5Q8TDM6 1919 aa16.85■□□□□ 0.29
COPB1-209ENST00000533096 FKBP1BP68106 108 aa16.84■□□□□ 0.29
COPB1-209ENST00000533096 PODNQ7Z5L7 613 aa16.84■□□□□ 0.29
COPB1-209ENST00000533096 OGFOD1Q8N543 542 aa16.84■□□□□ 0.29
COPB1-209ENST00000533096 GMLQ99445 158 aa16.84■□□□□ 0.29
COPB1-209ENST00000533096 PCDH10Q9P2E7 1040 aa16.84■□□□□ 0.29
COPB1-209ENST00000533096 XDHP47989 1333 aa16.84■□□□□ 0.29
COPB1-209ENST00000533096 C8orf58Q8NAV2 365 aa16.83■□□□□ 0.28
COPB1-209ENST00000533096 TAF1P21675 1872 aa16.82■□□□□ 0.28
COPB1-209ENST00000533096 MYBBP1AQ9BQG0 1328 aaKnown RBP16.82■□□□□ 0.28
COPB1-209ENST00000533096 APAF1O14727 1248 aa16.82■□□□□ 0.28
COPB1-209ENST00000533096 DDX58O95786 925 aaKnown RBP16.82■□□□□ 0.28
COPB1-209ENST00000533096 METTL22Q9BUU2 404 aaPredicted RBP16.82■□□□□ 0.28
COPB1-209ENST00000533096 MAP3K2Q9Y2U5 619 aa16.82■□□□□ 0.28
COPB1-209ENST00000533096 NF2P35240 595 aa16.81■□□□□ 0.28
COPB1-209ENST00000533096 CDC5LQ99459 802 aaKnown RBP16.81■□□□□ 0.28
COPB1-209ENST00000533096 MINPP1Q9UNW1 487 aa16.81■□□□□ 0.28
COPB1-209ENST00000533096 COL4A1P02462 1669 aa16.81■□□□□ 0.28
COPB1-209ENST00000533096 GPR25O00155 361 aa16.8■□□□□ 0.28
COPB1-209ENST00000533096 SASH1O94885 1247 aa16.8■□□□□ 0.28
COPB1-209ENST00000533096 GNAI1P63096 354 aa16.8■□□□□ 0.28
COPB1-209ENST00000533096 PTPN12Q05209 780 aaKnown RBP16.8■□□□□ 0.28
COPB1-209ENST00000533096 PKN2Q16513 984 aaKnown RBP16.8■□□□□ 0.28
COPB1-209ENST00000533096 GREM2Q9H772 168 aa16.8■□□□□ 0.28
COPB1-209ENST00000533096 WNT10BO00744 389 aa16.79■□□□□ 0.28
COPB1-209ENST00000533096 TM4SF4P48230 202 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms