RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 TTC21BQ7Z4L5 1316 aa7.96□□□□□ -1.13
TGFBR3-210ENST00000533089 TMED8Q6PL24 325 aaPredicted RBP7.96□□□□□ -1.13
TGFBR3-210ENST00000533089 VCXQ9H320 206 aa7.96□□□□□ -1.13
TGFBR3-210ENST00000533089 RABEP2Q9H5N1 569 aa7.96□□□□□ -1.13
TGFBR3-210ENST00000533089 BMP2KQ9NSY1 1161 aaPredicted RBP7.96□□□□□ -1.13
TGFBR3-210ENST00000533089 TMOD3Q9NYL9 352 aa7.96□□□□□ -1.13
TGFBR3-210ENST00000533089 ODF2LQ9ULJ1 636 aa7.96□□□□□ -1.13
TGFBR3-210ENST00000533089 ZNF652Q9Y2D9 606 aa7.96□□□□□ -1.13
TGFBR3-210ENST00000533089 ANKRD36BQ8N2N9 1353 aa7.96□□□□□ -1.14
TGFBR3-210ENST00000533089 POLR3DP05423 398 aaPredicted RBP7.96□□□□□ -1.14
TGFBR3-210ENST00000533089 AMOTQ4VCS5 1084 aa7.96□□□□□ -1.14
TGFBR3-210ENST00000533089 UPF3BQ9BZI7 483 aaKnown RBP7.96□□□□□ -1.14
TGFBR3-210ENST00000533089 MKRN1Q9UHC7 482 aaKnown RBP7.96□□□□□ -1.14
TGFBR3-210ENST00000533089 ADCY10Q96PN6 1610 aa7.96□□□□□ -1.14
TGFBR3-210ENST00000533089 HSF2BPO75031 334 aa7.96□□□□□ -1.14
TGFBR3-210ENST00000533089 TRIM21P19474 475 aaKnown RBP7.96□□□□□ -1.14
TGFBR3-210ENST00000533089 CEP85LQ5SZL2 805 aa7.96□□□□□ -1.14
TGFBR3-210ENST00000533089 KLHL10Q6JEL2 608 aa7.96□□□□□ -1.14
TGFBR3-210ENST00000533089 B4GALNT4Q76KP1 1039 aa7.96□□□□□ -1.14
TGFBR3-210ENST00000533089 MAATS1Q7Z4T9 603 aa7.96□□□□□ -1.14
TGFBR3-210ENST00000533089 SERPINA10Q9UK55 444 aa7.96□□□□□ -1.14
TGFBR3-210ENST00000533089 IFFO1Q0D2I5 559 aa7.96□□□□□ -1.14
TGFBR3-210ENST00000533089 METTL24Q5JXM2 366 aa7.95□□□□□ -1.14
TGFBR3-210ENST00000533089 G3BP2Q9UN86 482 aaKnown RBP7.95□□□□□ -1.14
TGFBR3-210ENST00000533089 EPB41L2O43491 1005 aaKnown RBP7.95□□□□□ -1.14
TGFBR3-210ENST00000533089 ELF2Q15723 593 aa7.95□□□□□ -1.14
TGFBR3-210ENST00000533089 CEP57L1Q8IYX8 460 aa7.95□□□□□ -1.14
TGFBR3-210ENST00000533089 GOLGA5Q8TBA6 731 aa7.95□□□□□ -1.14
TGFBR3-210ENST00000533089 BIN2Q9UBW5 565 aaPredicted RBP7.95□□□□□ -1.14
TGFBR3-210ENST00000533089 AFAP1L1Q8TED9 768 aa7.95□□□□□ -1.14
TGFBR3-210ENST00000533089 AIDAQ96BJ3 306 aa7.95□□□□□ -1.14
TGFBR3-210ENST00000533089 SRGAP3O43295 1099 aa7.95□□□□□ -1.14
TGFBR3-210ENST00000533089 BCAR3O75815 825 aa7.95□□□□□ -1.14
TGFBR3-210ENST00000533089 HNRNPH2P55795 449 aaKnown RBP7.95□□□□□ -1.14
TGFBR3-210ENST00000533089 UBE4AQ14139 1066 aa7.95□□□□□ -1.14
TGFBR3-210ENST00000533089 SYT10Q6XYQ8 523 aa7.95□□□□□ -1.14
TGFBR3-210ENST00000533089 USP6NLQ92738 828 aa7.95□□□□□ -1.14
TGFBR3-210ENST00000533089 TRIM6Q9C030 488 aaPredicted RBP7.95□□□□□ -1.14
TGFBR3-210ENST00000533089 WWC3Q9ULE0 1092 aa7.95□□□□□ -1.14
TGFBR3-210ENST00000533089 PPIP5K1Q6PFW1 1433 aa7.95□□□□□ -1.14
TGFBR3-210ENST00000533089 TNIP1Q15025 636 aa7.95□□□□□ -1.14
TGFBR3-210ENST00000533089 LUC7LQ9NQ29 371 aaKnown RBP7.95□□□□□ -1.14
TGFBR3-210ENST00000533089 DACH1Q9UI36 760 aa7.95□□□□□ -1.14
TGFBR3-210ENST00000533089 PLEKHG1Q9ULL1 1385 aa7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 ERCC3P19447 782 aa7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 ANKRD1Q15327 319 aa7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 EP400NLQ6ZTU2 488 aa7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 C17orf53Q8N3J3 647 aaPredicted RBP7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 FAM76AQ8TAV0 307 aa7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 DNAI1Q9UI46 699 aa7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 NPHP4O75161 1426 aaPredicted RBP7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 LACTBP83111 547 aaPredicted RBP7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 ANKS4BQ8N8V4 417 aa7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 RPGRQ92834 1020 aaKnown RBP7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 RABGAP1Q9Y3P9 1069 aa7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 PRIM1P49642 420 aaKnown RBP7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 CAVIN4Q5BKX8 364 aa7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 PPP4R3AQ6IN85 833 aa7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 DDX46Q7L014 1031 aaKnown RBP7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 ERO1AQ96HE7 468 aa7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 GBP5Q96PP8 586 aa7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 RNF216Q9NWF9 866 aaPredicted RBP7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 SEC63Q9UGP8 760 aaKnown RBP7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 EFCAB6Q5THR3 1501 aa7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 IRX1P78414 480 aaPredicted RBP7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 C6orf163Q5TEZ5 329 aa7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 CWC27Q6UX04 472 aaKnown RBP7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 GCC1Q96CN9 775 aa7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 CDKL5O76039 1030 aa7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 TRIM68Q6AZZ1 485 aa7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 MPRIPQ6WCQ1 1025 aa7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 CCDC186Q7Z3E2 898 aa7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 CDCA7LQ96GN5 454 aa7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 ARHGAP31Q2M1Z3 1444 aa7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 ABCA9Q8IUA7 1624 aa7.94□□□□□ -1.14
TGFBR3-210ENST00000533089 MINDY4BA8MYZ0 360 aa7.93□□□□□ -1.14
TGFBR3-210ENST00000533089 BAG4O95429 457 aaKnown RBP7.93□□□□□ -1.14
TGFBR3-210ENST00000533089 MCM2P49736 904 aa7.93□□□□□ -1.14
TGFBR3-210ENST00000533089 ATP11AP98196 1134 aa7.93□□□□□ -1.14
TGFBR3-210ENST00000533089 CFAP100Q494V2 611 aa7.93□□□□□ -1.14
TGFBR3-210ENST00000533089 CCDC12Q8WUD4 166 aaPredicted RBP7.93□□□□□ -1.14
TGFBR3-210ENST00000533089 TSPYL2Q9H2G4 693 aaPredicted RBP7.93□□□□□ -1.14
TGFBR3-210ENST00000533089 MKNK2Q9HBH9 465 aa7.93□□□□□ -1.14
TGFBR3-210ENST00000533089 TMEM51Q9NW97 253 aa7.93□□□□□ -1.14
TGFBR3-210ENST00000533089 RIPOR2Q9Y4F9 1068 aa7.93□□□□□ -1.14
TGFBR3-210ENST00000533089 PDE6BP35913 854 aa7.93□□□□□ -1.14
TGFBR3-210ENST00000533089 GNG11P61952 73 aa7.93□□□□□ -1.14
TGFBR3-210ENST00000533089 HDXQ7Z353 690 aa7.93□□□□□ -1.14
TGFBR3-210ENST00000533089 LRRC43Q8N309 656 aa7.93□□□□□ -1.14
TGFBR3-210ENST00000533089 TACO1Q9BSH4 297 aaKnown RBP7.93□□□□□ -1.14
TGFBR3-210ENST00000533089 HCLS1P14317 486 aaPredicted RBP7.93□□□□□ -1.14
TGFBR3-210ENST00000533089 ARHGAP25P42331 645 aa7.93□□□□□ -1.14
TGFBR3-210ENST00000533089 CCDC96Q2M329 555 aa7.93□□□□□ -1.14
TGFBR3-210ENST00000533089 NBPF3Q9H094 633 aa7.93□□□□□ -1.14
TGFBR3-210ENST00000533089 IL1RAPL2Q9NP60 686 aa7.93□□□□□ -1.14
TGFBR3-210ENST00000533089 BAIAP2L1Q9UHR4 511 aa7.93□□□□□ -1.14
TGFBR3-210ENST00000533089 ABCC11Q96J66 1382 aa7.93□□□□□ -1.14
TGFBR3-210ENST00000533089 CREB3O43889 395 aa7.93□□□□□ -1.14
TGFBR3-210ENST00000533089 GBP7Q8N8V2 638 aaPredicted RBP7.93□□□□□ -1.14
TGFBR3-210ENST00000533089 GOLGA1Q92805 767 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms