RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 GNAI2P04899 355 aa31.07■■■□□ 2.56
USP48-214ENST00000532737 RRP1P56182 461 aaKnown RBP31.07■■■□□ 2.56
USP48-214ENST00000532737 MVPQ14764 893 aaKnown RBP31.07■■■□□ 2.56
USP48-214ENST00000532737 MPHOSPH8Q99549 860 aa31.07■■■□□ 2.56
USP48-214ENST00000532737 RTFDC1Q9BY42 306 aaPredicted RBP31.07■■■□□ 2.56
USP48-214ENST00000532737 NMRK2Q9NPI5 230 aa31.07■■■□□ 2.56
USP48-214ENST00000532737 LRRC37AA6NMS7 1700 aa31.07■■■□□ 2.56
USP48-214ENST00000532737 TAF7LQ5H9L4 462 aa31.06■■■□□ 2.56
USP48-214ENST00000532737 CCDC88AQ3V6T2 1871 aa31.04■■■□□ 2.56
USP48-214ENST00000532737 TOMM70O94826 608 aa31.04■■■□□ 2.56
USP48-214ENST00000532737 RFX5P48382 616 aaPredicted RBP31.04■■■□□ 2.56
USP48-214ENST00000532737 PODXL2Q9NZ53 605 aa31.04■■■□□ 2.56
USP48-214ENST00000532737 IARSP41252 1262 aaKnown RBP31.03■■■□□ 2.56
USP48-214ENST00000532737 LDHAL6AQ6ZMR3 332 aa31.03■■■□□ 2.56
USP48-214ENST00000532737 SUPT20HQ8NEM7 779 aa31.02■■■□□ 2.56
USP48-214ENST00000532737 KLHDC4Q8TBB5 520 aa31.02■■■□□ 2.56
USP48-214ENST00000532737 PUS3Q9BZE2 481 aaKnown RBP31.02■■■□□ 2.56
USP48-214ENST00000532737 C1orf115Q9H7X2 142 aa31.02■■■□□ 2.56
USP48-214ENST00000532737 ANKIB1Q9P2G1 1089 aa31.02■■■□□ 2.56
USP48-214ENST00000532737 POLLQ9UGP5 575 aa31.02■■■□□ 2.56
USP48-214ENST00000532737 DDX19BQ9UMR2 479 aa31.02■■■□□ 2.56
USP48-214ENST00000532737 DUOX1Q9NRD9 1551 aa31.01■■■□□ 2.56
USP48-214ENST00000532737 TBC1D16Q8TBP0 767 aa31.01■■■□□ 2.55
USP48-214ENST00000532737 XDHP47989 1333 aa31■■■□□ 2.55
USP48-214ENST00000532737 C6orf229H3BNL8 230 aa31■■■□□ 2.55
USP48-214ENST00000532737 MTX1Q13505 466 aa31■■■□□ 2.55
USP48-214ENST00000532737 CNNM1Q9NRU3 951 aa31■■■□□ 2.55
USP48-214ENST00000532737 SPEF2Q9C093 1822 aa30.99■■■□□ 2.55
USP48-214ENST00000532737 CHRNDQ07001 517 aa30.99■■■□□ 2.55
USP48-214ENST00000532737 GGA1Q9UJY5 639 aa30.99■■■□□ 2.55
USP48-214ENST00000532737 WTIPA6NIX2 430 aaPredicted RBP30.98■■■□□ 2.55
USP48-214ENST00000532737 UFL1O94874 794 aa30.98■■■□□ 2.55
USP48-214ENST00000532737 PTPN12Q05209 780 aaKnown RBP30.98■■■□□ 2.55
USP48-214ENST00000532737 GPR101Q96P66 508 aaPredicted RBP30.98■■■□□ 2.55
USP48-214ENST00000532737 ANKRD2Q9GZV1 360 aa30.98■■■□□ 2.55
USP48-214ENST00000532737 SRGAP3O43295 1099 aa30.97■■■□□ 2.55
USP48-214ENST00000532737 PPIP5K2O43314 1243 aa30.97■■■□□ 2.55
USP48-214ENST00000532737 AOC3Q16853 763 aa30.97■■■□□ 2.55
USP48-214ENST00000532737 LRRC24Q50LG9 513 aa30.97■■■□□ 2.55
USP48-214ENST00000532737 LARGE2Q8N3Y3 721 aa30.97■■■□□ 2.55
USP48-214ENST00000532737 HELBQ8NG08 1087 aaPredicted RBP30.97■■■□□ 2.55
USP48-214ENST00000532737 RIPOR2Q9Y4F9 1068 aa30.97■■■□□ 2.55
USP48-214ENST00000532737 LTBP1Q14766 1721 aa30.97■■■□□ 2.55
USP48-214ENST00000532737 WDR90Q96KV7 1748 aa30.97■■■□□ 2.55
USP48-214ENST00000532737 ATP2B4P23634 1241 aa30.96■■■□□ 2.55
USP48-214ENST00000532737 VPS33BQ9H267 617 aa30.96■■■□□ 2.55
USP48-214ENST00000532737 ZBTB40Q9NUA8 1239 aa30.96■■■□□ 2.55
USP48-214ENST00000532737 TIAM2Q8IVF5 1701 aa30.95■■■□□ 2.55
USP48-214ENST00000532737 PNMA6EA0A0J9YXQ4 647 aa30.95■■■□□ 2.55
USP48-214ENST00000532737 KIAA2012Q0VF49 1180 aa30.95■■■□□ 2.55
USP48-214ENST00000532737 COL4A5P29400 1685 aa30.94■■■□□ 2.54
USP48-214ENST00000532737 RIMBP2O15034 1052 aa30.94■■■□□ 2.54
USP48-214ENST00000532737 TAF5LO75529 589 aa30.94■■■□□ 2.54
USP48-214ENST00000532737 APLP1P51693 650 aa30.94■■■□□ 2.54
USP48-214ENST00000532737 WASHC4Q2M389 1173 aa30.94■■■□□ 2.54
USP48-214ENST00000532737 PA2G4Q9UQ80 394 aaKnown RBP30.94■■■□□ 2.54
USP48-214ENST00000532737 EYA2O00167 538 aa30.93■■■□□ 2.54
USP48-214ENST00000532737 ATP8B2P98198 1209 aa30.93■■■□□ 2.54
USP48-214ENST00000532737 LEMD3Q9Y2U8 911 aa30.93■■■□□ 2.54
USP48-214ENST00000532737 SUPT16HQ9Y5B9 1047 aaKnown RBP30.93■■■□□ 2.54
USP48-214ENST00000532737 KDM2BQ8NHM5 1336 aa30.93■■■□□ 2.54
USP48-214ENST00000532737 RBM46Q8TBY0 533 aaKnown RBP30.92■■■□□ 2.54
USP48-214ENST00000532737 JDP2Q8WYK2 163 aa30.92■■■□□ 2.54
USP48-214ENST00000532737 EYA3Q99504 573 aa30.92■■■□□ 2.54
USP48-214ENST00000532737 COPRSQ9NQ92 184 aa30.92■■■□□ 2.54
USP48-214ENST00000532737 ZC3H4Q9UPT8 1303 aaKnown RBP30.92■■■□□ 2.54
USP48-214ENST00000532737 SNAP23O00161 211 aa30.91■■■□□ 2.54
USP48-214ENST00000532737 ZC3H12CQ9C0D7 883 aaKnown RBP30.91■■■□□ 2.54
USP48-214ENST00000532737 SIL1Q9H173 461 aa30.91■■■□□ 2.54
USP48-214ENST00000532737 CHMP4BQ9H444 224 aaKnown RBP30.91■■■□□ 2.54
USP48-214ENST00000532737 ZNF804BA4D1E1 1349 aa30.91■■■□□ 2.54
USP48-214ENST00000532737 CEP85Q6P2H3 762 aa30.9■■■□□ 2.54
USP48-214ENST00000532737 ATG9AQ7Z3C6 839 aa30.9■■■□□ 2.54
USP48-214ENST00000532737 NIM1KQ8IY84 436 aa30.9■■■□□ 2.54
USP48-214ENST00000532737 MROH5Q6ZUA9 1318 aa30.9■■■□□ 2.54
USP48-214ENST00000532737 DICER1Q9UPY3 1922 aaKnown RBP30.9■■■□□ 2.54
USP48-214ENST00000532737 POLA2Q14181 598 aa30.89■■■□□ 2.54
USP48-214ENST00000532737 FZD9O00144 591 aa30.88■■■□□ 2.53
USP48-214ENST00000532737 METTL24Q5JXM2 366 aa30.88■■■□□ 2.53
USP48-214ENST00000532737 IFFO2Q5TF58 517 aa30.88■■■□□ 2.53
USP48-214ENST00000532737 DNAJC5GQ8N7S2 189 aa30.88■■■□□ 2.53
USP48-214ENST00000532737 SSH3Q8TE77 659 aa30.88■■■□□ 2.53
USP48-214ENST00000532737 FBXO3Q9UK99 471 aa30.88■■■□□ 2.53
USP48-214ENST00000532737 CIAO1O76071 339 aa30.87■■■□□ 2.53
USP48-214ENST00000532737 KCNJ4P48050 445 aa30.87■■■□□ 2.53
USP48-214ENST00000532737 DOK7Q18PE1 504 aa30.87■■■□□ 2.53
USP48-214ENST00000532737 KLRK1P26718 216 aa30.86■■■□□ 2.53
USP48-214ENST00000532737 TXNRD3Q86VQ6 643 aa30.86■■■□□ 2.53
USP48-214ENST00000532737 VGLL2Q8N8G2 317 aa30.86■■■□□ 2.53
USP48-214ENST00000532737 CRBNQ96SW2 442 aa30.86■■■□□ 2.53
USP48-214ENST00000532737 ZNRF3Q9ULT6 936 aa30.86■■■□□ 2.53
USP48-214ENST00000532737 MED23Q9ULK4 1368 aa30.85■■■□□ 2.53
USP48-214ENST00000532737 ZNF541Q9H0D2 1346 aa30.85■■■□□ 2.53
USP48-214ENST00000532737 C16orf71Q8IYS4 520 aaPredicted RBP30.85■■■□□ 2.53
USP48-214ENST00000532737 DBNDD1Q9H9R9 158 aa30.85■■■□□ 2.53
USP48-214ENST00000532737 RRAGCQ9HB90 399 aa30.85■■■□□ 2.53
USP48-214ENST00000532737 IRS2Q9Y4H2 1338 aa30.83■■■□□ 2.53
USP48-214ENST00000532737 GLTPD2A6NH11 291 aa30.83■■■□□ 2.53
USP48-214ENST00000532737 PDE8BO95263 885 aa30.83■■■□□ 2.53
USP48-214ENST00000532737 IL15P40933 162 aaPredicted RBP30.83■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms