RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 KAZALD1Q96I82 304 aa9.78□□□□□ -0.84
SSBP3-211ENST00000528787 GPR108Q9NPR9 543 aa9.78□□□□□ -0.84
SSBP3-211ENST00000528787 COL11A2P13942 1736 aaPredicted RBP9.78□□□□□ -0.84
SSBP3-211ENST00000528787 LRRC37AA6NMS7 1700 aa9.77□□□□□ -0.85
SSBP3-211ENST00000528787 A0A0G2JLW4 131 aa9.77□□□□□ -0.85
SSBP3-211ENST00000528787 G3V3G9 751 aa9.77□□□□□ -0.85
SSBP3-211ENST00000528787 PTPN12Q05209 780 aaKnown RBP9.77□□□□□ -0.85
SSBP3-211ENST00000528787 UBE4AQ14139 1066 aa9.77□□□□□ -0.85
SSBP3-211ENST00000528787 PUM3Q15397 648 aaKnown RBP9.77□□□□□ -0.85
SSBP3-211ENST00000528787 CAVIN4Q5BKX8 364 aa9.77□□□□□ -0.85
SSBP3-211ENST00000528787 EPHA10Q5JZY3 1008 aa9.77□□□□□ -0.85
SSBP3-211ENST00000528787 DCAF8Q5TAQ9 597 aa9.77□□□□□ -0.85
SSBP3-211ENST00000528787 DPP8Q6V1X1 898 aaPredicted RBP9.77□□□□□ -0.85
SSBP3-211ENST00000528787 CENPQQ7L2Z9 268 aaPredicted RBP9.77□□□□□ -0.85
SSBP3-211ENST00000528787 SYNE4Q8N205 404 aa9.77□□□□□ -0.85
SSBP3-211ENST00000528787 MPNDQ8N594 471 aa9.77□□□□□ -0.85
SSBP3-211ENST00000528787 PSMD1Q99460 953 aa9.77□□□□□ -0.85
SSBP3-211ENST00000528787 LRRCC1Q9C099 1032 aa9.77□□□□□ -0.85
SSBP3-211ENST00000528787 DCTPP1Q9H773 170 aa9.77□□□□□ -0.85
SSBP3-211ENST00000528787 C1orf115Q9H7X2 142 aa9.77□□□□□ -0.85
SSBP3-211ENST00000528787 GNL3LQ9NVN8 582 aaKnown RBP9.77□□□□□ -0.85
SSBP3-211ENST00000528787 PODXL2Q9NZ53 605 aa9.77□□□□□ -0.85
SSBP3-211ENST00000528787 GGA1Q9UJY5 639 aa9.77□□□□□ -0.85
SSBP3-211ENST00000528787 SPEF2Q9C093 1822 aa9.77□□□□□ -0.85
SSBP3-211ENST00000528787 IGSF3O75054 1194 aa9.76□□□□□ -0.85
SSBP3-211ENST00000528787 PDE8BO95263 885 aa9.76□□□□□ -0.85
SSBP3-211ENST00000528787 SLC5A1P13866 664 aa9.76□□□□□ -0.85
SSBP3-211ENST00000528787 CHRNA5P30532 468 aa9.76□□□□□ -0.85
SSBP3-211ENST00000528787 CCDC24Q8N4L8 307 aa9.76□□□□□ -0.85
SSBP3-211ENST00000528787 CCDC85AQ96PX6 553 aaPredicted RBP9.76□□□□□ -0.85
SSBP3-211ENST00000528787 SEC31BQ9NQW1 1179 aa9.76□□□□□ -0.85
SSBP3-211ENST00000528787 BCS1LQ9Y276 419 aa9.76□□□□□ -0.85
SSBP3-211ENST00000528787 LTBP3Q9NS15 1303 aa9.76□□□□□ -0.85
SSBP3-211ENST00000528787 KIAA1551Q9HCM1 1747 aa9.76□□□□□ -0.85
SSBP3-211ENST00000528787 SLX4Q8IY92 1834 aa9.75□□□□□ -0.85
SSBP3-211ENST00000528787 PNMA6EA0A0J9YXQ4 647 aa9.75□□□□□ -0.85
SSBP3-211ENST00000528787 RFX5P48382 616 aaPredicted RBP9.75□□□□□ -0.85
SSBP3-211ENST00000528787 IRX6P78412 446 aaPredicted RBP9.75□□□□□ -0.85
SSBP3-211ENST00000528787 CHRNDQ07001 517 aa9.75□□□□□ -0.85
SSBP3-211ENST00000528787 GPR162Q16538 588 aa9.75□□□□□ -0.85
SSBP3-211ENST00000528787 GORABQ5T7V8 394 aa9.75□□□□□ -0.85
SSBP3-211ENST00000528787 VPS37DQ86XT2 251 aa9.75□□□□□ -0.85
SSBP3-211ENST00000528787 LPIN2Q92539 896 aa9.75□□□□□ -0.85
SSBP3-211ENST00000528787 CELF1Q92879 486 aaKnown RBP9.75□□□□□ -0.85
SSBP3-211ENST00000528787 ZC3H12CQ9C0D7 883 aaKnown RBP9.75□□□□□ -0.85
SSBP3-211ENST00000528787 TAOK3Q9H2K8 898 aa9.75□□□□□ -0.85
SSBP3-211ENST00000528787 MINPP1Q9UNW1 487 aa9.75□□□□□ -0.85
SSBP3-211ENST00000528787 NSFL1CQ9UNZ2 370 aaKnown RBP9.75□□□□□ -0.85
SSBP3-211ENST00000528787 RIPOR2Q9Y4F9 1068 aa9.75□□□□□ -0.85
SSBP3-211ENST00000528787 IFIT2P09913 472 aaKnown RBP9.74□□□□□ -0.85
SSBP3-211ENST00000528787 KCNA3P22001 575 aa9.74□□□□□ -0.85
SSBP3-211ENST00000528787 MMP14P50281 582 aa9.74□□□□□ -0.85
SSBP3-211ENST00000528787 FKBP4Q02790 459 aaKnown RBP eCLIP9.74□□□□□ -0.85
SSBP3-211ENST00000528787 CCDC158Q5M9N0 1113 aa9.74□□□□□ -0.85
SSBP3-211ENST00000528787 C3orf67Q6ZVT6 689 aa9.74□□□□□ -0.85
SSBP3-211ENST00000528787 ZNF804AQ7Z570 1209 aa9.74□□□□□ -0.85
SSBP3-211ENST00000528787 JDP2Q8WYK2 163 aa9.74□□□□□ -0.85
SSBP3-211ENST00000528787 SIL1Q9H173 461 aa9.74□□□□□ -0.85
SSBP3-211ENST00000528787 PCDHB15Q9Y5E8 787 aa9.74□□□□□ -0.85
SSBP3-211ENST00000528787 ZNF804BA4D1E1 1349 aa9.74□□□□□ -0.85
SSBP3-211ENST00000528787 CHD4Q14839 1912 aa9.74□□□□□ -0.85
SSBP3-211ENST00000528787 FER1L6Q2WGJ9 1857 aa9.73□□□□□ -0.85
SSBP3-211ENST00000528787 C6orf229H3BNL8 230 aa9.73□□□□□ -0.85
SSBP3-211ENST00000528787 SEMA3EO15041 775 aa9.73□□□□□ -0.85
SSBP3-211ENST00000528787 ERC2O15083 957 aa9.73□□□□□ -0.85
SSBP3-211ENST00000528787 ZBTB22O15209 634 aa9.73□□□□□ -0.85
SSBP3-211ENST00000528787 C21orf2O43822 256 aa9.73□□□□□ -0.85
SSBP3-211ENST00000528787 UFL1O94874 794 aa9.73□□□□□ -0.85
SSBP3-211ENST00000528787 ATP2B3Q16720 1220 aa9.73□□□□□ -0.85
SSBP3-211ENST00000528787 WASHC4Q2M389 1173 aa9.73□□□□□ -0.85
SSBP3-211ENST00000528787 TMED8Q6PL24 325 aaPredicted RBP9.73□□□□□ -0.85
SSBP3-211ENST00000528787 C15orf52Q6ZUT6 534 aaKnown RBP9.73□□□□□ -0.85
SSBP3-211ENST00000528787 SMC5Q8IY18 1101 aa9.73□□□□□ -0.85
SSBP3-211ENST00000528787 RHPN1Q8TCX5 695 aa9.73□□□□□ -0.85
SSBP3-211ENST00000528787 RTFDC1Q9BY42 306 aaPredicted RBP9.73□□□□□ -0.85
SSBP3-211ENST00000528787 ZC3H4Q9UPT8 1303 aaKnown RBP9.73□□□□□ -0.85
SSBP3-211ENST00000528787 MED23Q9ULK4 1368 aa9.73□□□□□ -0.85
SSBP3-211ENST00000528787 TAF1P21675 1872 aa9.72□□□□□ -0.85
SSBP3-211ENST00000528787 UQCRFS1P1P0C7P4 283 aa9.72□□□□□ -0.85
SSBP3-211ENST00000528787 LRRFIP1Q32MZ4 808 aaKnown RBP9.72□□□□□ -0.85
SSBP3-211ENST00000528787 PELP1Q8IZL8 1130 aaKnown RBP9.72□□□□□ -0.85
SSBP3-211ENST00000528787 ZGPATQ8N5A5 531 aaKnown RBP9.72□□□□□ -0.85
SSBP3-211ENST00000528787 NLGN2Q8NFZ4 835 aa9.72□□□□□ -0.85
SSBP3-211ENST00000528787 C7orf43Q8WVR3 580 aa9.72□□□□□ -0.85
SSBP3-211ENST00000528787 ZNF594Q96JF6 807 aaPredicted RBP9.72□□□□□ -0.85
SSBP3-211ENST00000528787 COA1Q9GZY4 146 aa9.72□□□□□ -0.85
SSBP3-211ENST00000528787 EXOC6BQ9Y2D4 811 aa9.72□□□□□ -0.85
SSBP3-211ENST00000528787 ARAP2Q8WZ64 1704 aa9.71□□□□□ -0.85
SSBP3-211ENST00000528787 A0A1B0GUL6 1792 aa9.71□□□□□ -0.85
SSBP3-211ENST00000528787 EIF5BO60841 1220 aaKnown RBP9.71□□□□□ -0.86
SSBP3-211ENST00000528787 FRAT2O75474 233 aaPredicted RBP9.71□□□□□ -0.86
SSBP3-211ENST00000528787 ANKRD45Q5TZF3 282 aa9.71□□□□□ -0.86
SSBP3-211ENST00000528787 ARHGAP27Q6ZUM4 889 aa9.71□□□□□ -0.86
SSBP3-211ENST00000528787 ATG9AQ7Z3C6 839 aa9.71□□□□□ -0.86
SSBP3-211ENST00000528787 PODNQ7Z5L7 613 aa9.71□□□□□ -0.86
SSBP3-211ENST00000528787 TICAM2Q86XR7 235 aa9.71□□□□□ -0.86
SSBP3-211ENST00000528787 SIRT2Q8IXJ6 389 aa9.71□□□□□ -0.86
SSBP3-211ENST00000528787 TBC1D16Q8TBP0 767 aa9.71□□□□□ -0.86
SSBP3-211ENST00000528787 TTC41PQ6P2S7 1318 aa9.71□□□□□ -0.86
SSBP3-211ENST00000528787 MYH13Q9UKX3 1938 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms