RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 C9orf78Q9NZ63 289 aaPredicted RBP15.34■□□□□ 0.05
TRAPPC4-209ENST00000528230 GGA1Q9UJY5 639 aa15.34■□□□□ 0.05
TRAPPC4-209ENST00000528230 XDHP47989 1333 aa15.34■□□□□ 0.05
TRAPPC4-209ENST00000528230 SPEF2Q9C093 1822 aa15.33■□□□□ 0.05
TRAPPC4-209ENST00000528230 ITGA6P23229 1130 aa15.33■□□□□ 0.04
TRAPPC4-209ENST00000528230 ATP2B4P23634 1241 aa15.33■□□□□ 0.04
TRAPPC4-209ENST00000528230 LMOD1P29536 600 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC4-209ENST00000528230 IGHMBP2P38935 993 aaKnown RBP15.33■□□□□ 0.04
TRAPPC4-209ENST00000528230 FOXO4P98177 505 aa15.33■□□□□ 0.04
TRAPPC4-209ENST00000528230 CIAPIN1Q6FI81 312 aa15.33■□□□□ 0.04
TRAPPC4-209ENST00000528230 MINPP1Q9UNW1 487 aa15.33■□□□□ 0.04
TRAPPC4-209ENST00000528230 ANKRD18BA2A2Z9 1011 aa15.32■□□□□ 0.04
TRAPPC4-209ENST00000528230 RIMBP2O15034 1052 aa15.32■□□□□ 0.04
TRAPPC4-209ENST00000528230 SCNN1DP51172 638 aa15.32■□□□□ 0.04
TRAPPC4-209ENST00000528230 SMC4Q9NTJ3 1288 aa15.32■□□□□ 0.04
TRAPPC4-209ENST00000528230 UTYO14607 1347 aa15.32■□□□□ 0.04
TRAPPC4-209ENST00000528230 YDJCA8MPS7 323 aa15.31■□□□□ 0.04
TRAPPC4-209ENST00000528230 UFL1O94874 794 aa15.31■□□□□ 0.04
TRAPPC4-209ENST00000528230 FAM161AQ3B820 660 aa15.31■□□□□ 0.04
TRAPPC4-209ENST00000528230 MPHOSPH8Q99549 860 aa15.31■□□□□ 0.04
TRAPPC4-209ENST00000528230 ADAMTSL1Q8N6G6 1762 aa15.31■□□□□ 0.04
TRAPPC4-209ENST00000528230 RAD17O75943 681 aa15.3■□□□□ 0.04
TRAPPC4-209ENST00000528230 POTEIP0CG38 1075 aa15.3■□□□□ 0.04
TRAPPC4-209ENST00000528230 POTEJP0CG39 1038 aa15.3■□□□□ 0.04
TRAPPC4-209ENST00000528230 EPS15P42566 896 aa15.3■□□□□ 0.04
TRAPPC4-209ENST00000528230 IFIT5Q13325 482 aaKnown RBP15.3■□□□□ 0.04
TRAPPC4-209ENST00000528230 BCL2L13Q9BXK5 485 aa15.3■□□□□ 0.04
TRAPPC4-209ENST00000528230 ANKRD2Q9GZV1 360 aa15.3■□□□□ 0.04
TRAPPC4-209ENST00000528230 DBNDD1Q9H9R9 158 aa15.3■□□□□ 0.04
TRAPPC4-209ENST00000528230 GPRC5DQ9NZD1 345 aa15.3■□□□□ 0.04
TRAPPC4-209ENST00000528230 LEMD3Q9Y2U8 911 aa15.3■□□□□ 0.04
TRAPPC4-209ENST00000528230 ECE2O60344 883 aa15.29■□□□□ 0.04
TRAPPC4-209ENST00000528230 CCT4P50991 539 aaKnown RBP15.29■□□□□ 0.04
TRAPPC4-209ENST00000528230 RARSP54136 660 aaKnown RBP15.29■□□□□ 0.04
TRAPPC4-209ENST00000528230 HNRNPUQ00839 825 aaKnown RBP eCLIP15.29■□□□□ 0.04
TRAPPC4-209ENST00000528230 EAPPQ56P03 285 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC4-209ENST00000528230 EPHA10Q5JZY3 1008 aa15.29■□□□□ 0.04
TRAPPC4-209ENST00000528230 LMBR1LQ6UX01 489 aa15.29■□□□□ 0.04
TRAPPC4-209ENST00000528230 USP50Q70EL3 339 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC4-209ENST00000528230 G3V3G9 751 aa15.28■□□□□ 0.04
TRAPPC4-209ENST00000528230 NBPF7P0C2Y1 421 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC4-209ENST00000528230 GMPSP49915 693 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC4-209ENST00000528230 DOK7Q18PE1 504 aa15.28■□□□□ 0.04
TRAPPC4-209ENST00000528230 CCDC57Q2TAC2 916 aa15.28■□□□□ 0.04
TRAPPC4-209ENST00000528230 DCAF8Q5TAQ9 597 aa15.28■□□□□ 0.04
TRAPPC4-209ENST00000528230 DPF2Q92785 391 aa15.28■□□□□ 0.04
TRAPPC4-209ENST00000528230 ADARB2Q9NS39 739 aaKnown RBP15.28■□□□□ 0.04
TRAPPC4-209ENST00000528230 CLEC11AQ9Y240 323 aa15.28■□□□□ 0.04
TRAPPC4-209ENST00000528230 PSME4Q14997 1843 aa15.28■□□□□ 0.04
TRAPPC4-209ENST00000528230 SCN9AQ15858 1988 aa15.27■□□□□ 0.04
TRAPPC4-209ENST00000528230 MED23Q9ULK4 1368 aa15.27■□□□□ 0.04
TRAPPC4-209ENST00000528230 PSMD14O00487 310 aa15.27■□□□□ 0.04
TRAPPC4-209ENST00000528230 ITGBL1O95965 494 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC4-209ENST00000528230 RPS12P25398 132 aaKnown RBP15.27■□□□□ 0.04
TRAPPC4-209ENST00000528230 PODNQ7Z5L7 613 aa15.27■□□□□ 0.04
TRAPPC4-209ENST00000528230 DNAJC5GQ8N7S2 189 aa15.27■□□□□ 0.04
TRAPPC4-209ENST00000528230 ARHGAP45Q92619 1136 aa15.27■□□□□ 0.04
TRAPPC4-209ENST00000528230 KAZALD1Q96I82 304 aa15.27■□□□□ 0.04
TRAPPC4-209ENST00000528230 SUCLG2Q96I99 432 aa15.27■□□□□ 0.04
TRAPPC4-209ENST00000528230 GPR101Q96P66 508 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC4-209ENST00000528230 API5Q9BZZ5 524 aaKnown RBP15.27■□□□□ 0.04
TRAPPC4-209ENST00000528230 USP44Q9H0E7 712 aa15.27■□□□□ 0.04
TRAPPC4-209ENST00000528230 NOB1Q9ULX3 412 aaKnown RBP15.27■□□□□ 0.04
TRAPPC4-209ENST00000528230 CHMP3Q9Y3E7 222 aa15.27■□□□□ 0.04
TRAPPC4-209ENST00000528230 PASKQ96RG2 1323 aa15.26■□□□□ 0.03
TRAPPC4-209ENST00000528230 VIL1P09327 827 aaKnown RBP15.26■□□□□ 0.03
TRAPPC4-209ENST00000528230 RABL6Q3YEC7 729 aaPredicted RBP15.26■□□□□ 0.03
TRAPPC4-209ENST00000528230 CNOT7Q9UIV1 285 aaKnown RBP15.26■□□□□ 0.03
TRAPPC4-209ENST00000528230 ZNF804BA4D1E1 1349 aa15.25■□□□□ 0.03
TRAPPC4-209ENST00000528230 H7C1D1 291 aa15.25■□□□□ 0.03
TRAPPC4-209ENST00000528230 CHRNDQ07001 517 aa15.25■□□□□ 0.03
TRAPPC4-209ENST00000528230 CNTROBQ8N137 903 aa15.25■□□□□ 0.03
TRAPPC4-209ENST00000528230 KCNQ5Q9NR82 932 aa15.25■□□□□ 0.03
TRAPPC4-209ENST00000528230 A0A1B0GUL6 1792 aa15.24■□□□□ 0.03
TRAPPC4-209ENST00000528230 KIF16BQ96L93 1317 aa15.24■□□□□ 0.03
TRAPPC4-209ENST00000528230 WTIPA6NIX2 430 aaPredicted RBP15.24■□□□□ 0.03
TRAPPC4-209ENST00000528230 TAF7LQ5H9L4 462 aa15.24■□□□□ 0.03
TRAPPC4-209ENST00000528230 LDHAL6AQ6ZMR3 332 aa15.24■□□□□ 0.03
TRAPPC4-209ENST00000528230 ZC3H15Q8WU90 426 aaKnown RBP15.24■□□□□ 0.03
TRAPPC4-209ENST00000528230 COA1Q9GZY4 146 aa15.24■□□□□ 0.03
TRAPPC4-209ENST00000528230 PGAP2Q9UHJ9 254 aa15.24■□□□□ 0.03
TRAPPC4-209ENST00000528230 ZBTB12Q9Y330 459 aaPredicted RBP15.24■□□□□ 0.03
TRAPPC4-209ENST00000528230 ZNF609O15014 1411 aa15.24■□□□□ 0.03
TRAPPC4-209ENST00000528230 ZBED9Q6R2W3 1325 aa15.23■□□□□ 0.03
TRAPPC4-209ENST00000528230 IPO8O15397 1037 aaKnown RBP15.23■□□□□ 0.03
TRAPPC4-209ENST00000528230 MAP1SQ66K74 1059 aaPredicted RBP15.23■□□□□ 0.03
TRAPPC4-209ENST00000528230 C15orf52Q6ZUT6 534 aaKnown RBP15.23■□□□□ 0.03
TRAPPC4-209ENST00000528230 AGBL3Q8NEM8 1001 aa15.23■□□□□ 0.03
TRAPPC4-209ENST00000528230 ZNF594Q96JF6 807 aaPredicted RBP15.23■□□□□ 0.03
TRAPPC4-209ENST00000528230 BICC1Q9H694 974 aaKnown RBP15.23■□□□□ 0.03
TRAPPC4-209ENST00000528230 CREBZFQ9NS37 354 aa15.23■□□□□ 0.03
TRAPPC4-209ENST00000528230 HDAC5Q9UQL6 1122 aa15.23■□□□□ 0.03
TRAPPC4-209ENST00000528230 USP17L3A6NCW0 530 aa15.22■□□□□ 0.03
TRAPPC4-209ENST00000528230 USP17L4A6NCW7 530 aa15.22■□□□□ 0.03
TRAPPC4-209ENST00000528230 KCNJ4P48050 445 aa15.22■□□□□ 0.03
TRAPPC4-209ENST00000528230 HTRA3P83110 453 aa15.22■□□□□ 0.03
TRAPPC4-209ENST00000528230 PPP4R3CPQ6ZMV5 832 aa15.22■□□□□ 0.03
TRAPPC4-209ENST00000528230 USP17L1Q7RTZ2 530 aa15.22■□□□□ 0.03
TRAPPC4-209ENST00000528230 MICALL2Q8IY33 904 aa15.22■□□□□ 0.03
TRAPPC4-209ENST00000528230 ANKRD44Q8N8A2 993 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms