RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 DPF2Q92785 391 aa17.12■□□□□ 0.33
CAPN1-207ENST00000527189 JARID2Q92833 1246 aaPredicted RBP17.12■□□□□ 0.33
CAPN1-207ENST00000527189 CDC5LQ99459 802 aaKnown RBP17.12■□□□□ 0.33
CAPN1-207ENST00000527189 BCL2L13Q9BXK5 485 aa17.12■□□□□ 0.33
CAPN1-207ENST00000527189 ANKIB1Q9P2G1 1089 aa17.12■□□□□ 0.33
CAPN1-207ENST00000527189 LTBP1Q14766 1721 aa17.12■□□□□ 0.33
CAPN1-207ENST00000527189 LINS1Q8NG48 757 aa17.11■□□□□ 0.33
CAPN1-207ENST00000527189 DNAAF4Q8WXU2 420 aa17.11■□□□□ 0.33
CAPN1-207ENST00000527189 ABHD8Q96I13 439 aa17.11■□□□□ 0.33
CAPN1-207ENST00000527189 PLA2G12BQ9BX93 195 aa17.11■□□□□ 0.33
CAPN1-207ENST00000527189 PGAP2Q9UHJ9 254 aa17.11■□□□□ 0.33
CAPN1-207ENST00000527189 GGA1Q9UJY5 639 aa17.11■□□□□ 0.33
CAPN1-207ENST00000527189 CNTNAP1P78357 1384 aa17.11■□□□□ 0.33
CAPN1-207ENST00000527189 RTL9Q8NET4 1388 aa17.11■□□□□ 0.33
CAPN1-207ENST00000527189 H7C1D1 291 aa17.1■□□□□ 0.33
CAPN1-207ENST00000527189 RIMBP2O15034 1052 aa17.1■□□□□ 0.33
CAPN1-207ENST00000527189 RPS12P25398 132 aaKnown RBP17.1■□□□□ 0.33
CAPN1-207ENST00000527189 GCKRQ14397 625 aa17.1■□□□□ 0.33
CAPN1-207ENST00000527189 BSDC1Q9NW68 430 aaPredicted RBP17.1■□□□□ 0.33
CAPN1-207ENST00000527189 CNOT7Q9UIV1 285 aaKnown RBP17.1■□□□□ 0.33
CAPN1-207ENST00000527189 PDE4DIPQ5VU43 2346 aa17.1■□□□□ 0.33
CAPN1-207ENST00000527189 CTCFP49711 727 aaPredicted RBP17.09■□□□□ 0.33
CAPN1-207ENST00000527189 UBE3BQ7Z3V4 1068 aa17.09■□□□□ 0.33
CAPN1-207ENST00000527189 DBNDD1Q9H9R9 158 aa17.09■□□□□ 0.33
CAPN1-207ENST00000527189 SPINK5Q9NQ38 1064 aaPredicted RBP17.09■□□□□ 0.33
CAPN1-207ENST00000527189 XDHP47989 1333 aa17.09■□□□□ 0.33
CAPN1-207ENST00000527189 COL4A1P02462 1669 aa17.08■□□□□ 0.32
CAPN1-207ENST00000527189 PSMD14O00487 310 aa17.08■□□□□ 0.32
CAPN1-207ENST00000527189 ECE2O60344 883 aa17.08■□□□□ 0.32
CAPN1-207ENST00000527189 UFL1O94874 794 aa17.08■□□□□ 0.32
CAPN1-207ENST00000527189 ATP2B4P23634 1241 aa17.08■□□□□ 0.32
CAPN1-207ENST00000527189 CCDC85AQ96PX6 553 aaPredicted RBP17.08■□□□□ 0.32
CAPN1-207ENST00000527189 RASSF10A6NK89 507 aa17.07■□□□□ 0.32
CAPN1-207ENST00000527189 G3V3G9 751 aa17.07■□□□□ 0.32
CAPN1-207ENST00000527189 LBX1P52954 281 aa17.07■□□□□ 0.32
CAPN1-207ENST00000527189 DOK7Q18PE1 504 aa17.07■□□□□ 0.32
CAPN1-207ENST00000527189 DEFB115Q30KQ5 88 aa17.07■□□□□ 0.32
CAPN1-207ENST00000527189 DCAF8Q5TAQ9 597 aa17.07■□□□□ 0.32
CAPN1-207ENST00000527189 GREM2Q9H772 168 aa17.07■□□□□ 0.32
CAPN1-207ENST00000527189 ZNF521Q96K83 1311 aa17.06■□□□□ 0.32
CAPN1-207ENST00000527189 CSF1RP07333 972 aa17.06■□□□□ 0.32
CAPN1-207ENST00000527189 VIL1P09327 827 aaKnown RBP17.06■□□□□ 0.32
CAPN1-207ENST00000527189 CASP7P55210 303 aa17.06■□□□□ 0.32
CAPN1-207ENST00000527189 MICALL2Q8IY33 904 aa17.06■□□□□ 0.32
CAPN1-207ENST00000527189 MINPP1Q9UNW1 487 aa17.06■□□□□ 0.32
CAPN1-207ENST00000527189 ZBTB12Q9Y330 459 aaPredicted RBP17.06■□□□□ 0.32
CAPN1-207ENST00000527189 IGHMBP2P38935 993 aaKnown RBP17.05■□□□□ 0.32
CAPN1-207ENST00000527189 HIRAP54198 1017 aaPredicted RBP17.05■□□□□ 0.32
CAPN1-207ENST00000527189 CDC37L1Q7L3B6 337 aa17.05■□□□□ 0.32
CAPN1-207ENST00000527189 PODNQ7Z5L7 613 aa17.05■□□□□ 0.32
CAPN1-207ENST00000527189 VEGFBP49765 207 aa17.04■□□□□ 0.32
CAPN1-207ENST00000527189 MLLT1Q03111 559 aaPredicted RBP17.04■□□□□ 0.32
CAPN1-207ENST00000527189 BEND3Q5T5X7 828 aa17.04■□□□□ 0.32
CAPN1-207ENST00000527189 GPR101Q96P66 508 aaPredicted RBP17.04■□□□□ 0.32
CAPN1-207ENST00000527189 KCNQ5Q9NR82 932 aa17.04■□□□□ 0.32
CAPN1-207ENST00000527189 WBP1LQ9NX94 342 aa17.04■□□□□ 0.32
CAPN1-207ENST00000527189 ABT1Q9ULW3 272 aaKnown RBP17.04■□□□□ 0.32
CAPN1-207ENST00000527189 MYH3P11055 1940 aa17.04■□□□□ 0.32
CAPN1-207ENST00000527189 ITGA6P23229 1130 aa17.03■□□□□ 0.32
CAPN1-207ENST00000527189 RGS19P49795 217 aa17.03■□□□□ 0.32
CAPN1-207ENST00000527189 CST9Q5W186 159 aa17.03■□□□□ 0.32
CAPN1-207ENST00000527189 AGBL3Q8NEM8 1001 aa17.03■□□□□ 0.32
CAPN1-207ENST00000527189 TRPM4Q8TD43 1214 aa17.03■□□□□ 0.32
CAPN1-207ENST00000527189 AIDAQ96BJ3 306 aa17.03■□□□□ 0.32
CAPN1-207ENST00000527189 ANKRD2Q9GZV1 360 aa17.03■□□□□ 0.32
CAPN1-207ENST00000527189 LEMD3Q9Y2U8 911 aa17.03■□□□□ 0.32
CAPN1-207ENST00000527189 TRAF5O00463 557 aa17.02■□□□□ 0.32
CAPN1-207ENST00000527189 HSPA8P11142 646 aaKnown RBP17.02■□□□□ 0.32
CAPN1-207ENST00000527189 CCT4P50991 539 aaKnown RBP17.02■□□□□ 0.32
CAPN1-207ENST00000527189 MPHOSPH8Q99549 860 aa17.02■□□□□ 0.32
CAPN1-207ENST00000527189 ZNF609O15014 1411 aa17.02■□□□□ 0.31
CAPN1-207ENST00000527189 MED23Q9ULK4 1368 aa17.02■□□□□ 0.31
CAPN1-207ENST00000527189 E9PSI1 815 aa17.01■□□□□ 0.31
CAPN1-207ENST00000527189 F6X3S4 739 aa17.01■□□□□ 0.31
CAPN1-207ENST00000527189 ECE1P42892 770 aa17.01■□□□□ 0.31
CAPN1-207ENST00000527189 RSBN1LQ6PCB5 846 aaPredicted RBP17.01■□□□□ 0.31
CAPN1-207ENST00000527189 SAMD7Q7Z3H4 446 aa17.01■□□□□ 0.31
CAPN1-207ENST00000527189 TLL2Q9Y6L7 1015 aa17.01■□□□□ 0.31
CAPN1-207ENST00000527189 WDR33Q9C0J8 1336 aaKnown RBP17■□□□□ 0.31
CAPN1-207ENST00000527189 SHTN1A0MZ66 631 aa17■□□□□ 0.31
CAPN1-207ENST00000527189 ANKRD18BA2A2Z9 1011 aa17■□□□□ 0.31
CAPN1-207ENST00000527189 USP17L3A6NCW0 530 aa17■□□□□ 0.31
CAPN1-207ENST00000527189 USP17L4A6NCW7 530 aa17■□□□□ 0.31
CAPN1-207ENST00000527189 ALDH1L1O75891 902 aa17■□□□□ 0.31
CAPN1-207ENST00000527189 FMR1Q06787 632 aaKnown RBP eCLIP17■□□□□ 0.311e-6■□□□□ 10.5
CAPN1-207ENST00000527189 USP17L1Q7RTZ2 530 aa17■□□□□ 0.31
CAPN1-207ENST00000527189 HHIPL1Q96JK4 782 aa17■□□□□ 0.31
CAPN1-207ENST00000527189 GLIS2Q9BZE0 524 aaPredicted RBP17■□□□□ 0.31
CAPN1-207ENST00000527189 THSD7BQ9C0I4 1608 aa16.99■□□□□ 0.31
CAPN1-207ENST00000527189 TRPM7Q96QT4 1865 aa16.99■□□□□ 0.31
CAPN1-207ENST00000527189 GRM8O00222 908 aa16.99■□□□□ 0.31
CAPN1-207ENST00000527189 CELF2O95319 508 aaKnown RBP16.99■□□□□ 0.31
CAPN1-207ENST00000527189 MMP14P50281 582 aa16.99■□□□□ 0.31
CAPN1-207ENST00000527189 ZNF280AP59817 542 aaPredicted RBP16.99■□□□□ 0.31
CAPN1-207ENST00000527189 FOXO4P98177 505 aa16.99■□□□□ 0.31
CAPN1-207ENST00000527189 MAP2K1Q02750 393 aaPredicted RBP16.99■□□□□ 0.31
CAPN1-207ENST00000527189 IFIT5Q13325 482 aaKnown RBP16.99■□□□□ 0.31
CAPN1-207ENST00000527189 TBC1D10BQ4KMP7 808 aaPredicted RBP16.99■□□□□ 0.31
CAPN1-207ENST00000527189 COA1Q9GZY4 146 aa16.99■□□□□ 0.31
CAPN1-207ENST00000527189 SAPCD2Q86UD0 394 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms