RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 VAMP4O75379 141 aa12.09□□□□□ -0.47
SF3B2-204ENST00000525207 RAD17O75943 681 aa12.09□□□□□ -0.47
SF3B2-204ENST00000525207 FKBP5Q13451 457 aaPredicted RBP12.09□□□□□ -0.47
SF3B2-204ENST00000525207 CNTROBQ8N137 903 aa12.09□□□□□ -0.47
SF3B2-204ENST00000525207 TBC1D16Q8TBP0 767 aa12.09□□□□□ -0.47
SF3B2-204ENST00000525207 DNAAF4Q8WXU2 420 aa12.09□□□□□ -0.47
SF3B2-204ENST00000525207 CCDC85AQ96PX6 553 aaPredicted RBP12.09□□□□□ -0.47
SF3B2-204ENST00000525207 EYA3Q99504 573 aa12.09□□□□□ -0.47
SF3B2-204ENST00000525207 MYH16Q9H6N6 1097 aa12.09□□□□□ -0.47
SF3B2-204ENST00000525207 DBNDD1Q9H9R9 158 aa12.09□□□□□ -0.47
SF3B2-204ENST00000525207 U3KPZ7 1027 aaPredicted RBP12.09□□□□□ -0.47
SF3B2-204ENST00000525207 C6orf229H3BNL8 230 aa12.08□□□□□ -0.48
SF3B2-204ENST00000525207 ECE2O60344 883 aa12.08□□□□□ -0.48
SF3B2-204ENST00000525207 UFL1O94874 794 aa12.08□□□□□ -0.48
SF3B2-204ENST00000525207 TNIP1Q15025 636 aa12.08□□□□□ -0.48
SF3B2-204ENST00000525207 UBE3BQ7Z3V4 1068 aa12.08□□□□□ -0.48
SF3B2-204ENST00000525207 ANKRD18AQ8IVF6 992 aa12.08□□□□□ -0.48
SF3B2-204ENST00000525207 GPR101Q96P66 508 aaPredicted RBP12.08□□□□□ -0.48
SF3B2-204ENST00000525207 CDC5LQ99459 802 aaKnown RBP12.08□□□□□ -0.48
SF3B2-204ENST00000525207 MKRN1Q9UHC7 482 aaKnown RBP12.08□□□□□ -0.48
SF3B2-204ENST00000525207 XDHP47989 1333 aa12.08□□□□□ -0.48
SF3B2-204ENST00000525207 PSMD14O00487 310 aa12.07□□□□□ -0.48
SF3B2-204ENST00000525207 HSPA1AP0DMV8 641 aaKnown RBP12.07□□□□□ -0.48
SF3B2-204ENST00000525207 HSPA1BP0DMV9 641 aaKnown RBP12.07□□□□□ -0.48
SF3B2-204ENST00000525207 CASP7P55210 303 aa12.07□□□□□ -0.48
SF3B2-204ENST00000525207 GCKRQ14397 625 aa12.07□□□□□ -0.48
SF3B2-204ENST00000525207 LINS1Q8NG48 757 aa12.07□□□□□ -0.48
SF3B2-204ENST00000525207 TTLL11Q8NHH1 800 aa12.07□□□□□ -0.48
SF3B2-204ENST00000525207 TRPM4Q8TD43 1214 aa12.07□□□□□ -0.48
SF3B2-204ENST00000525207 PLA2G12BQ9BX93 195 aa12.07□□□□□ -0.48
SF3B2-204ENST00000525207 BCL2L13Q9BXK5 485 aa12.07□□□□□ -0.48
SF3B2-204ENST00000525207 GREM2Q9H772 168 aa12.07□□□□□ -0.48
SF3B2-204ENST00000525207 GGA1Q9UJY5 639 aa12.07□□□□□ -0.48
SF3B2-204ENST00000525207 SHTN1A0MZ66 631 aa12.06□□□□□ -0.48
SF3B2-204ENST00000525207 H7C1W4 665 aa12.06□□□□□ -0.48
SF3B2-204ENST00000525207 RIMBP2O15034 1052 aa12.06□□□□□ -0.48
SF3B2-204ENST00000525207 MICALL2Q8IY33 904 aa12.06□□□□□ -0.48
SF3B2-204ENST00000525207 RNF39Q9H2S5 420 aa12.06□□□□□ -0.48
SF3B2-204ENST00000525207 ANKIB1Q9P2G1 1089 aa12.06□□□□□ -0.48
SF3B2-204ENST00000525207 MED23Q9ULK4 1368 aa12.05□□□□□ -0.48
SF3B2-204ENST00000525207 RASSF10A6NK89 507 aa12.05□□□□□ -0.48
SF3B2-204ENST00000525207 FAM161AQ3B820 660 aa12.05□□□□□ -0.48
SF3B2-204ENST00000525207 DPF2Q92785 391 aa12.05□□□□□ -0.48
SF3B2-204ENST00000525207 ZBTB12Q9Y330 459 aaPredicted RBP12.05□□□□□ -0.48
SF3B2-204ENST00000525207 F6X3S4 739 aa12.04□□□□□ -0.48
SF3B2-204ENST00000525207 TRAF5O00463 557 aa12.04□□□□□ -0.48
SF3B2-204ENST00000525207 RPS12P25398 132 aaKnown RBP12.04□□□□□ -0.48
SF3B2-204ENST00000525207 HIRAP54198 1017 aaPredicted RBP12.04□□□□□ -0.48
SF3B2-204ENST00000525207 FMR1Q06787 632 aaKnown RBP eCLIP12.04□□□□□ -0.484e-11■■□□□ 14.4
SF3B2-204ENST00000525207 DOK7Q18PE1 504 aa12.04□□□□□ -0.48
SF3B2-204ENST00000525207 IFFO2Q5TF58 517 aa12.04□□□□□ -0.48
SF3B2-204ENST00000525207 ZC3H15Q8WU90 426 aaKnown RBP12.04□□□□□ -0.48
SF3B2-204ENST00000525207 ZC3H12CQ9C0D7 883 aaKnown RBP12.04□□□□□ -0.48
SF3B2-204ENST00000525207 BSDC1Q9NW68 430 aaPredicted RBP12.04□□□□□ -0.48
SF3B2-204ENST00000525207 CNOT7Q9UIV1 285 aaKnown RBP12.04□□□□□ -0.48
SF3B2-204ENST00000525207 ITGA6P23229 1130 aa12.03□□□□□ -0.48
SF3B2-204ENST00000525207 ATP2B4P23634 1241 aa12.03□□□□□ -0.48
SF3B2-204ENST00000525207 VEGFBP49765 207 aa12.03□□□□□ -0.48
SF3B2-204ENST00000525207 BEND3Q5T5X7 828 aa12.03□□□□□ -0.48
SF3B2-204ENST00000525207 KCNQ5Q9NR82 932 aa12.03□□□□□ -0.48
SF3B2-204ENST00000525207 PGAP2Q9UHJ9 254 aa12.03□□□□□ -0.48
SF3B2-204ENST00000525207 ABT1Q9ULW3 272 aaKnown RBP12.03□□□□□ -0.48
SF3B2-204ENST00000525207 MINPP1Q9UNW1 487 aa12.03□□□□□ -0.48
SF3B2-204ENST00000525207 POLR2AP24928 1970 aaKnown RBP12.03□□□□□ -0.48
SF3B2-204ENST00000525207 H7C1D1 291 aa12.02□□□□□ -0.49
SF3B2-204ENST00000525207 EGFRP00533 1210 aa12.02□□□□□ -0.49
SF3B2-204ENST00000525207 CSF1RP07333 972 aa12.02□□□□□ -0.49
SF3B2-204ENST00000525207 VIL1P09327 827 aaKnown RBP12.02□□□□□ -0.49
SF3B2-204ENST00000525207 IGHMBP2P38935 993 aaKnown RBP12.02□□□□□ -0.49
SF3B2-204ENST00000525207 GLIS2Q9BZE0 524 aaPredicted RBP12.02□□□□□ -0.49
SF3B2-204ENST00000525207 ARAP2Q8WZ64 1704 aa12.01□□□□□ -0.49
SF3B2-204ENST00000525207 MYCNP04198 464 aaPredicted RBP12.01□□□□□ -0.49
SF3B2-204ENST00000525207 CCT4P50991 539 aaKnown RBP12.01□□□□□ -0.49
SF3B2-204ENST00000525207 CST9Q5W186 159 aa12.01□□□□□ -0.49
SF3B2-204ENST00000525207 SAMD7Q7Z3H4 446 aa12.01□□□□□ -0.49
SF3B2-204ENST00000525207 TLL2Q9Y6L7 1015 aa12.01□□□□□ -0.49
SF3B2-204ENST00000525207 WTIPA6NIX2 430 aaPredicted RBP12□□□□□ -0.49
SF3B2-204ENST00000525207 E9PSI1 815 aa12□□□□□ -0.49
SF3B2-204ENST00000525207 G3V3G9 751 aa12□□□□□ -0.49
SF3B2-204ENST00000525207 GRM8O00222 908 aa12□□□□□ -0.49
SF3B2-204ENST00000525207 KIF4BQ2VIQ3 1234 aa12□□□□□ -0.49
SF3B2-204ENST00000525207 DEFB115Q30KQ5 88 aa12□□□□□ -0.49
SF3B2-204ENST00000525207 TBC1D10BQ4KMP7 808 aaPredicted RBP12□□□□□ -0.49
SF3B2-204ENST00000525207 DCAF8Q5TAQ9 597 aa12□□□□□ -0.49
SF3B2-204ENST00000525207 COL13A1Q5TAT6 717 aaPredicted RBP12□□□□□ -0.49
SF3B2-204ENST00000525207 RSBN1LQ6PCB5 846 aaPredicted RBP12□□□□□ -0.49
SF3B2-204ENST00000525207 PODNQ7Z5L7 613 aa12□□□□□ -0.49
SF3B2-204ENST00000525207 AGBL3Q8NEM8 1001 aa12□□□□□ -0.49
SF3B2-204ENST00000525207 ECM29Q5VYK3 1845 aa12□□□□□ -0.49
SF3B2-204ENST00000525207 ANKRD18BA2A2Z9 1011 aa11.99□□□□□ -0.49
SF3B2-204ENST00000525207 ALDH1L1O75891 902 aa11.99□□□□□ -0.49
SF3B2-204ENST00000525207 CELF2O95319 508 aaKnown RBP11.99□□□□□ -0.49
SF3B2-204ENST00000525207 ZNF280AP59817 542 aaPredicted RBP11.99□□□□□ -0.49
SF3B2-204ENST00000525207 FOXO4P98177 505 aa11.99□□□□□ -0.49
SF3B2-204ENST00000525207 CDC37L1Q7L3B6 337 aa11.99□□□□□ -0.49
SF3B2-204ENST00000525207 GMLQ99445 158 aa11.99□□□□□ -0.49
SF3B2-204ENST00000525207 MPHOSPH8Q99549 860 aa11.99□□□□□ -0.49
SF3B2-204ENST00000525207 GGA3Q9NZ52 723 aa11.99□□□□□ -0.49
SF3B2-204ENST00000525207 LEMD3Q9Y2U8 911 aa11.99□□□□□ -0.49
SF3B2-204ENST00000525207 WDR33Q9C0J8 1336 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms