RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 ZC3H12CQ9C0D7 883 aaKnown RBP23.62■■□□□ 1.37
CAPN1-203ENST00000525013 PODXL2Q9NZ53 605 aa23.62■■□□□ 1.37
CAPN1-203ENST00000525013 G3V3G9 751 aa23.61■■□□□ 1.37
CAPN1-203ENST00000525013 DCAF8Q5TAQ9 597 aa23.61■■□□□ 1.37
CAPN1-203ENST00000525013 USP50Q70EL3 339 aaPredicted RBP23.61■■□□□ 1.37
CAPN1-203ENST00000525013 CREBZFQ9NS37 354 aa23.61■■□□□ 1.37
CAPN1-203ENST00000525013 PASKQ96RG2 1323 aa23.6■■□□□ 1.37
CAPN1-203ENST00000525013 ECE2O60344 883 aa23.6■■□□□ 1.37
CAPN1-203ENST00000525013 ADARB2Q9NS39 739 aaKnown RBP23.6■■□□□ 1.37
CAPN1-203ENST00000525013 E9PSI1 815 aa23.59■■□□□ 1.37
CAPN1-203ENST00000525013 PLA2G12BQ9BX93 195 aa23.59■■□□□ 1.37
CAPN1-203ENST00000525013 XDHP47989 1333 aa23.59■■□□□ 1.37
CAPN1-203ENST00000525013 RTL9Q8NET4 1388 aa23.58■■□□□ 1.37
CAPN1-203ENST00000525013 CCER2I3L3R5 266 aa23.58■■□□□ 1.37
CAPN1-203ENST00000525013 PSMD14O00487 310 aa23.58■■□□□ 1.37
CAPN1-203ENST00000525013 CASP7P55210 303 aa23.58■■□□□ 1.37
CAPN1-203ENST00000525013 BEND3Q5T5X7 828 aa23.58■■□□□ 1.37
CAPN1-203ENST00000525013 BSDC1Q9NW68 430 aaPredicted RBP23.58■■□□□ 1.37
CAPN1-203ENST00000525013 SLC4A10Q6U841 1118 aa23.57■■□□□ 1.36
CAPN1-203ENST00000525013 JMYQ8N9B5 988 aa23.57■■□□□ 1.36
CAPN1-203ENST00000525013 KCNQ5Q9NR82 932 aa23.57■■□□□ 1.36
CAPN1-203ENST00000525013 CNOT7Q9UIV1 285 aaKnown RBP23.57■■□□□ 1.36
CAPN1-203ENST00000525013 ZBTB12Q9Y330 459 aaPredicted RBP23.57■■□□□ 1.36
CAPN1-203ENST00000525013 TMEM88BA6NKF7 163 aa23.56■■□□□ 1.36
CAPN1-203ENST00000525013 ITGA6P23229 1130 aa23.56■■□□□ 1.36
CAPN1-203ENST00000525013 ATP2B4P23634 1241 aa23.56■■□□□ 1.36
CAPN1-203ENST00000525013 IGHMBP2P38935 993 aaKnown RBP23.56■■□□□ 1.36
CAPN1-203ENST00000525013 FAM161AQ3B820 660 aa23.56■■□□□ 1.36
CAPN1-203ENST00000525013 MKRN1Q9UHC7 482 aaKnown RBP23.56■■□□□ 1.36
CAPN1-203ENST00000525013 SCN9AQ15858 1988 aa23.56■■□□□ 1.36
CAPN1-203ENST00000525013 H7C1D1 291 aa23.55■■□□□ 1.36
CAPN1-203ENST00000525013 SLFN5Q08AF3 891 aa23.55■■□□□ 1.36
CAPN1-203ENST00000525013 MINPP1Q9UNW1 487 aa23.55■■□□□ 1.36
CAPN1-203ENST00000525013 PCNTO95613 3336 aa23.54■■□□□ 1.36
CAPN1-203ENST00000525013 MICALL2Q8IY33 904 aa23.54■■□□□ 1.36
CAPN1-203ENST00000525013 MPHOSPH8Q99549 860 aa23.54■■□□□ 1.36
CAPN1-203ENST00000525013 CHMP3Q9Y3E7 222 aa23.54■■□□□ 1.36
CAPN1-203ENST00000525013 SHTN1A0MZ66 631 aa23.53■■□□□ 1.36
CAPN1-203ENST00000525013 CSF1RP07333 972 aa23.53■■□□□ 1.36
CAPN1-203ENST00000525013 DPF2Q92785 391 aa23.53■■□□□ 1.36
CAPN1-203ENST00000525013 CDCA7LQ96GN5 454 aa23.53■■□□□ 1.36
CAPN1-203ENST00000525013 C9orf78Q9NZ63 289 aaPredicted RBP23.53■■□□□ 1.36
CAPN1-203ENST00000525013 GRM8O00222 908 aa23.52■■□□□ 1.36
CAPN1-203ENST00000525013 SRCIN1Q9C0H9 1055 aa23.52■■□□□ 1.36
CAPN1-203ENST00000525013 ANKRD18BA2A2Z9 1011 aa23.51■■□□□ 1.35
CAPN1-203ENST00000525013 WTIPA6NIX2 430 aaPredicted RBP23.51■■□□□ 1.35
CAPN1-203ENST00000525013 ALDH1L1O75891 902 aa23.51■■□□□ 1.35
CAPN1-203ENST00000525013 RPS12P25398 132 aaKnown RBP23.51■■□□□ 1.35
CAPN1-203ENST00000525013 MRPL50Q8N5N7 158 aaKnown RBP23.51■■□□□ 1.35
CAPN1-203ENST00000525013 TRPM4Q8TD43 1214 aa23.51■■□□□ 1.35
CAPN1-203ENST00000525013 TRPM7Q96QT4 1865 aa23.51■■□□□ 1.35
CAPN1-203ENST00000525013 TRAF5O00463 557 aa23.5■■□□□ 1.35
CAPN1-203ENST00000525013 CCT4P50991 539 aaKnown RBP23.5■■□□□ 1.35
CAPN1-203ENST00000525013 HIRAP54198 1017 aaPredicted RBP23.5■■□□□ 1.35
CAPN1-203ENST00000525013 FOXO4P98177 505 aa23.5■■□□□ 1.35
CAPN1-203ENST00000525013 FMR1Q06787 632 aaKnown RBP eCLIP23.5■■□□□ 1.355e-7■□□□□ 10.1
CAPN1-203ENST00000525013 IFIT5Q13325 482 aaKnown RBP23.5■■□□□ 1.35
CAPN1-203ENST00000525013 SAMD7Q7Z3H4 446 aa23.49■■□□□ 1.35
CAPN1-203ENST00000525013 SSH1Q8WYL5 1049 aa23.49■■□□□ 1.35
CAPN1-203ENST00000525013 ANKRD2Q9GZV1 360 aa23.49■■□□□ 1.35
CAPN1-203ENST00000525013 POLR2AP24928 1970 aaKnown RBP23.49■■□□□ 1.35
CAPN1-203ENST00000525013 VIL1P09327 827 aaKnown RBP23.48■■□□□ 1.35
CAPN1-203ENST00000525013 TBC1D10BQ4KMP7 808 aaPredicted RBP23.48■■□□□ 1.35
CAPN1-203ENST00000525013 RBM26Q5T8P6 1007 aaKnown RBP23.48■■□□□ 1.35
CAPN1-203ENST00000525013 LMBR1LQ6UX01 489 aa23.48■■□□□ 1.35
CAPN1-203ENST00000525013 ZC3H15Q8WU90 426 aaKnown RBP23.48■■□□□ 1.35
CAPN1-203ENST00000525013 ABT1Q9ULW3 272 aaKnown RBP23.48■■□□□ 1.35
CAPN1-203ENST00000525013 CNTNAP1P78357 1384 aa23.48■■□□□ 1.35
CAPN1-203ENST00000525013 KCNJ4P48050 445 aa23.47■■□□□ 1.35
CAPN1-203ENST00000525013 EPHA10Q5JZY3 1008 aa23.47■■□□□ 1.35
CAPN1-203ENST00000525013 PODNQ7Z5L7 613 aa23.47■■□□□ 1.35
CAPN1-203ENST00000525013 GLIS2Q9BZE0 524 aaPredicted RBP23.47■■□□□ 1.35
CAPN1-203ENST00000525013 LEMD3Q9Y2U8 911 aa23.47■■□□□ 1.35
CAPN1-203ENST00000525013 MED23Q9ULK4 1368 aa23.47■■□□□ 1.35
CAPN1-203ENST00000525013 PSME4Q14997 1843 aa23.47■■□□□ 1.35
CAPN1-203ENST00000525013 PTPRCP08575 1304 aa23.46■■□□□ 1.35
CAPN1-203ENST00000525013 PGAP2Q9UHJ9 254 aa23.46■■□□□ 1.35
CAPN1-203ENST00000525013 ZNF804BA4D1E1 1349 aa23.45■■□□□ 1.34
CAPN1-203ENST00000525013 CHRNDQ07001 517 aa23.45■■□□□ 1.34
CAPN1-203ENST00000525013 CCDC57Q2TAC2 916 aa23.45■■□□□ 1.34
CAPN1-203ENST00000525013 TAF7LQ5H9L4 462 aa23.45■■□□□ 1.34
CAPN1-203ENST00000525013 RSBN1LQ6PCB5 846 aaPredicted RBP23.45■■□□□ 1.34
CAPN1-203ENST00000525013 USP17L3A6NCW0 530 aa23.44■■□□□ 1.34
CAPN1-203ENST00000525013 USP17L4A6NCW7 530 aa23.44■■□□□ 1.34
CAPN1-203ENST00000525013 EGFRP00533 1210 aa23.44■■□□□ 1.34
CAPN1-203ENST00000525013 VEGFBP49765 207 aa23.44■■□□□ 1.34
CAPN1-203ENST00000525013 DEFB115Q30KQ5 88 aa23.44■■□□□ 1.34
CAPN1-203ENST00000525013 USP17L1Q7RTZ2 530 aa23.44■■□□□ 1.34
CAPN1-203ENST00000525013 FBXW7Q969H0 707 aa23.44■■□□□ 1.34
CAPN1-203ENST00000525013 HSPA1AP0DMV8 641 aaKnown RBP23.43■■□□□ 1.34
CAPN1-203ENST00000525013 HSPA1BP0DMV9 641 aaKnown RBP23.43■■□□□ 1.34
CAPN1-203ENST00000525013 CST9Q5W186 159 aa23.43■■□□□ 1.34
CAPN1-203ENST00000525013 CDC37L1Q7L3B6 337 aa23.43■■□□□ 1.34
CAPN1-203ENST00000525013 TXNRD3Q86VQ6 643 aa23.43■■□□□ 1.34
CAPN1-203ENST00000525013 TRMT2AQ8IZ69 625 aaKnown RBP23.43■■□□□ 1.34
CAPN1-203ENST00000525013 AGBL3Q8NEM8 1001 aa23.43■■□□□ 1.34
CAPN1-203ENST00000525013 HELBQ8NG08 1087 aaPredicted RBP23.43■■□□□ 1.34
CAPN1-203ENST00000525013 ZNF594Q96JF6 807 aaPredicted RBP23.43■■□□□ 1.34
CAPN1-203ENST00000525013 SMC4Q9NTJ3 1288 aa23.43■■□□□ 1.34
CAPN1-203ENST00000525013 RASSF10A6NK89 507 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms