RNA–Protein interactions for RNA: ENST00000524057.3

SORBS3-222, Transcript of sorbin and SH3 domain containing 3, human

TSL 3

Gene SORBS3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS3-222	ENST00000524057	MKRN3	Q13064	507 aa	Known RBP	14.21	□□□□□ -0.13
SORBS3-222	ENST00000524057	PDIA6	Q15084	440 aa		14.21	□□□□□ -0.13
SORBS3-222	ENST00000524057	PRAMEF18	Q5VWM3	479 aa		14.21	□□□□□ -0.13
SORBS3-222	ENST00000524057	CELF1	Q92879	486 aa	Known RBP	14.21	□□□□□ -0.13
SORBS3-222	ENST00000524057	TRMT112	Q9UI30	125 aa	Known RBP	14.21	□□□□□ -0.13
SORBS3-222	ENST00000524057	NUDC	Q9Y266	331 aa		14.21	□□□□□ -0.13
SORBS3-222	ENST00000524057	SZT2	Q5T011	3432 aa		14.21	□□□□□ -0.13
SORBS3-222	ENST00000524057	TAF1	P21675	1872 aa		14.21	□□□□□ -0.14
SORBS3-222	ENST00000524057	LAMB4	A4D0S4	1761 aa		14.2	□□□□□ -0.14
SORBS3-222	ENST00000524057	DLL1	O00548	723 aa		14.2	□□□□□ -0.14
SORBS3-222	ENST00000524057	EN2	P19622	333 aa	Predicted RBP	14.2	□□□□□ -0.14
SORBS3-222	ENST00000524057	TBC1D16	Q8TBP0	767 aa		14.2	□□□□□ -0.14
SORBS3-222	ENST00000524057	PRKRIP1	Q9H875	184 aa	Predicted RBP	14.2	□□□□□ -0.14
SORBS3-222	ENST00000524057	TRIM17	Q9Y577	477 aa		14.2	□□□□□ -0.14
SORBS3-222	ENST00000524057	ERBB4	Q15303	1308 aa		14.19	□□□□□ -0.14
SORBS3-222	ENST00000524057	RALBP1	Q15311	655 aa		14.19	□□□□□ -0.14
SORBS3-222	ENST00000524057	OTOP1	Q7RTM1	612 aa		14.19	□□□□□ -0.14
SORBS3-222	ENST00000524057	CFAP53	Q96M91	514 aa		14.19	□□□□□ -0.14
SORBS3-222	ENST00000524057	EYA3	Q99504	573 aa		14.19	□□□□□ -0.14
SORBS3-222	ENST00000524057	ZC3H12C	Q9C0D7	883 aa	Known RBP	14.19	□□□□□ -0.14
SORBS3-222	ENST00000524057	ANKRD36C	Q5JPF3	1778 aa		14.19	□□□□□ -0.14
SORBS3-222	ENST00000524057	SH3TC1	Q8TE82	1336 aa		14.18	□□□□□ -0.14
SORBS3-222	ENST00000524057	HTT	P42858	3142 aa		14.18	□□□□□ -0.14
SORBS3-222	ENST00000524057	CENPF	P49454	3210 aa		14.18	□□□□□ -0.14
SORBS3-222	ENST00000524057	ANXA1	P04083	346 aa		14.18	□□□□□ -0.14
SORBS3-222	ENST00000524057	SREBF2	Q12772	1141 aa		14.18	□□□□□ -0.14
SORBS3-222	ENST00000524057	TCIRG1	Q13488	830 aa		14.18	□□□□□ -0.14
SORBS3-222	ENST00000524057	TTLL12	Q14166	644 aa	Predicted RBP	14.18	□□□□□ -0.14
SORBS3-222	ENST00000524057	PROSER3	Q2NL68	480 aa		14.18	□□□□□ -0.14
SORBS3-222	ENST00000524057	CCDC184	Q52MB2	194 aa		14.18	□□□□□ -0.14
SORBS3-222	ENST00000524057	AGBL3	Q8NEM8	1001 aa		14.18	□□□□□ -0.14
SORBS3-222	ENST00000524057	ZNF428	Q96B54	188 aa		14.18	□□□□□ -0.14
SORBS3-222	ENST00000524057	MYOZ2	Q9NPC6	264 aa		14.18	□□□□□ -0.14
SORBS3-222	ENST00000524057	LAMB2	P55268	1798 aa		14.18	□□□□□ -0.14
SORBS3-222	ENST00000524057	PAPPA2	Q9BXP8	1791 aa		14.18	□□□□□ -0.14
SORBS3-222	ENST00000524057	PITPNM2	Q9BZ72	1349 aa		14.17	□□□□□ -0.14
SORBS3-222	ENST00000524057	BRCA2	P51587	3418 aa		14.17	□□□□□ -0.14
SORBS3-222	ENST00000524057	EIF2S2	P20042	333 aa	Known RBP	14.17	□□□□□ -0.14
SORBS3-222	ENST00000524057	PTPN12	Q05209	780 aa	Known RBP	14.17	□□□□□ -0.14
SORBS3-222	ENST00000524057	HSP90AB3P	Q58FF7	597 aa		14.17	□□□□□ -0.14
SORBS3-222	ENST00000524057	RSBN1L	Q6PCB5	846 aa	Predicted RBP	14.17	□□□□□ -0.14
SORBS3-222	ENST00000524057	COPS6	Q7L5N1	327 aa		14.17	□□□□□ -0.14
SORBS3-222	ENST00000524057	GML	Q99445	158 aa		14.17	□□□□□ -0.14
SORBS3-222	ENST00000524057	PTPN22	Q9Y2R2	807 aa		14.17	□□□□□ -0.14
SORBS3-222	ENST00000524057	USP17L8	P0C7I0	530 aa		14.16	□□□□□ -0.14
SORBS3-222	ENST00000524057	SF3B3	Q15393	1217 aa	Known RBP	14.16	□□□□□ -0.14
SORBS3-222	ENST00000524057	PLEKHF1	Q96S99	279 aa		14.16	□□□□□ -0.14
SORBS3-222	ENST00000524057		G3V3G9	751 aa		14.15	□□□□□ -0.14
SORBS3-222	ENST00000524057	ALDH1A1	P00352	501 aa		14.15	□□□□□ -0.14
SORBS3-222	ENST00000524057	AIMP1	Q12904	312 aa	Known RBP	14.15	□□□□□ -0.14
SORBS3-222	ENST00000524057	NBPF9	Q3BBW0	867 aa		14.15	□□□□□ -0.14
SORBS3-222	ENST00000524057	DCAF8	Q5TAQ9	597 aa		14.15	□□□□□ -0.14
SORBS3-222	ENST00000524057	NECTIN2	Q92692	538 aa		14.15	□□□□□ -0.14
SORBS3-222	ENST00000524057	OTUD5	Q96G74	571 aa		14.15	□□□□□ -0.14
SORBS3-222	ENST00000524057	LRRC37A	A6NMS7	1700 aa		14.15	□□□□□ -0.14
SORBS3-222	ENST00000524057	MYBBP1A	Q9BQG0	1328 aa	Known RBP	14.15	□□□□□ -0.15
SORBS3-222	ENST00000524057	SCN9A	Q15858	1988 aa		14.14	□□□□□ -0.15
SORBS3-222	ENST00000524057	RPS8	P62241	208 aa	Known RBP	14.14	□□□□□ -0.15
SORBS3-222	ENST00000524057	SPRYD7	Q5W111	196 aa		14.14	□□□□□ -0.15
SORBS3-222	ENST00000524057	SLC17A8	Q8NDX2	589 aa		14.14	□□□□□ -0.15
SORBS3-222	ENST00000524057	XAGE3	Q8WTP9	111 aa		14.14	□□□□□ -0.15
SORBS3-222	ENST00000524057	ARMC5	Q96C12	935 aa		14.14	□□□□□ -0.15
SORBS3-222	ENST00000524057	PODXL2	Q9NZ53	605 aa		14.14	□□□□□ -0.15
SORBS3-222	ENST00000524057	KDM3B	Q7LBC6	1761 aa		14.14	□□□□□ -0.15
SORBS3-222	ENST00000524057		H0YGN5	161 aa		14.13	□□□□□ -0.15
SORBS3-222	ENST00000524057	PRKG1	Q13976	671 aa		14.13	□□□□□ -0.15
SORBS3-222	ENST00000524057	LDLRAD1	Q5T700	205 aa		14.13	□□□□□ -0.15
SORBS3-222	ENST00000524057	IFNL1	Q8IU54	200 aa		14.13	□□□□□ -0.15
SORBS3-222	ENST00000524057	FAM89A	Q96GI7	184 aa		14.13	□□□□□ -0.15
SORBS3-222	ENST00000524057	COL4A1	P02462	1669 aa		14.12	□□□□□ -0.15
SORBS3-222	ENST00000524057	NF2	P35240	595 aa		14.12	□□□□□ -0.15
SORBS3-222	ENST00000524057	INHBE	P58166	350 aa		14.12	□□□□□ -0.15
SORBS3-222	ENST00000524057	TMEM106C	Q9BVX2	250 aa		14.12	□□□□□ -0.15
SORBS3-222	ENST00000524057	ZNF609	O15014	1411 aa		14.12	□□□□□ -0.15
SORBS3-222	ENST00000524057	KIAA0100	Q14667	2235 aa	Known RBP	14.11	□□□□□ -0.15
SORBS3-222	ENST00000524057	UFL1	O94874	794 aa		14.11	□□□□□ -0.15
SORBS3-222	ENST00000524057	ARMC9	Q7Z3E5	817 aa		14.11	□□□□□ -0.15
SORBS3-222	ENST00000524057	CD99L2	Q8TCZ2	262 aa		14.11	□□□□□ -0.15
SORBS3-222	ENST00000524057	ERO1A	Q96HE7	468 aa		14.11	□□□□□ -0.15
SORBS3-222	ENST00000524057	ANKIB1	Q9P2G1	1089 aa		14.11	□□□□□ -0.15
SORBS3-222	ENST00000524057	USP17L3	A6NCW0	530 aa		14.1	□□□□□ -0.15
SORBS3-222	ENST00000524057	USP17L4	A6NCW7	530 aa		14.1	□□□□□ -0.15
SORBS3-222	ENST00000524057	MANSC4	A6NHS7	340 aa	Predicted RBP	14.1	□□□□□ -0.15
SORBS3-222	ENST00000524057	IGF2BP3	O00425	579 aa	Known RBP eCLIP	14.1	□□□□□ -0.15
SORBS3-222	ENST00000524057	WNT10B	O00744	389 aa		14.1	□□□□□ -0.15
SORBS3-222	ENST00000524057	CAP1	Q01518	475 aa		14.1	□□□□□ -0.15
SORBS3-222	ENST00000524057	USP17L1	Q7RTZ2	530 aa		14.1	□□□□□ -0.15
SORBS3-222	ENST00000524057	EFCC1	Q9HA90	598 aa		14.1	□□□□□ -0.15
SORBS3-222	ENST00000524057	GGA1	Q9UJY5	639 aa		14.1	□□□□□ -0.15
SORBS3-222	ENST00000524057	FZD1	Q9UP38	647 aa		14.1	□□□□□ -0.15
SORBS3-222	ENST00000524057	RBBP6	Q7Z6E9	1792 aa	Known RBP	14.09	□□□□□ -0.15
SORBS3-222	ENST00000524057	RTL5	Q5HYW3	569 aa	Predicted RBP	14.09	□□□□□ -0.15
SORBS3-222	ENST00000524057	PODN	Q7Z5L7	613 aa		14.09	□□□□□ -0.15
SORBS3-222	ENST00000524057	SLC10A4	Q96EP9	437 aa		14.09	□□□□□ -0.15
SORBS3-222	ENST00000524057	ISCA1	Q9BUE6	129 aa		14.09	□□□□□ -0.15
SORBS3-222	ENST00000524057	SEC31B	Q9NQW1	1179 aa		14.09	□□□□□ -0.15
SORBS3-222	ENST00000524057	TSPYL4	Q9UJ04	414 aa		14.09	□□□□□ -0.15
SORBS3-222	ENST00000524057	ANGEL1	Q9UNK9	670 aa	Known RBP	14.09	□□□□□ -0.15
SORBS3-222	ENST00000524057		A0A0C4DFX4	3053 aa		14.08	□□□□□ -0.16
SORBS3-222	ENST00000524057	DDX60	Q8IY21	1712 aa	Known RBP	14.08	□□□□□ -0.16

Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms