RNA–Protein interactions for RNA: ENST00000523752.5

TNFRSF10B-208, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 1 (best)

Gene TNFRSF10B, Length 3,328 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-208ENST00000523752 PDCP20941 246 aa9.48□□□□□ -0.89
TNFRSF10B-208ENST00000523752 CEBPZQ03701 1054 aaKnown RBP9.48□□□□□ -0.89
TNFRSF10B-208ENST00000523752 LRMPQ12912 555 aa9.48□□□□□ -0.89
TNFRSF10B-208ENST00000523752 RESTQ13127 1097 aa9.48□□□□□ -0.89
TNFRSF10B-208ENST00000523752 TSGA10IPQ3SY00 556 aa9.48□□□□□ -0.89
TNFRSF10B-208ENST00000523752 ANKRD13DQ6ZTN6 518 aa9.48□□□□□ -0.89
TNFRSF10B-208ENST00000523752 KRT28Q7Z3Y7 464 aa9.48□□□□□ -0.89
TNFRSF10B-208ENST00000523752 NEK1Q96PY6 1258 aa9.48□□□□□ -0.89
TNFRSF10B-208ENST00000523752 SCRN1Q12765 414 aa9.48□□□□□ -0.89
TNFRSF10B-208ENST00000523752 ALDH8A1Q9H2A2 487 aaPredicted RBP9.48□□□□□ -0.89
TNFRSF10B-208ENST00000523752 HMG20BQ9P0W2 317 aa9.48□□□□□ -0.89
TNFRSF10B-208ENST00000523752 ZNF330Q9Y3S2 320 aaPredicted RBP9.48□□□□□ -0.89
TNFRSF10B-208ENST00000523752 A0A087WWV3 80 aa9.47□□□□□ -0.89
TNFRSF10B-208ENST00000523752 HSP90B1P14625 803 aaKnown RBP9.47□□□□□ -0.89
TNFRSF10B-208ENST00000523752 DRC7Q8IY82 874 aa9.47□□□□□ -0.89
TNFRSF10B-208ENST00000523752 RAPGEF4Q8WZA2 1011 aa9.47□□□□□ -0.89
TNFRSF10B-208ENST00000523752 GLI3P10071 1580 aa9.47□□□□□ -0.89
TNFRSF10B-208ENST00000523752 CSB-PGBD3P0DP91 1061 aa9.47□□□□□ -0.89
TNFRSF10B-208ENST00000523752 BICD2Q8TD16 824 aa9.47□□□□□ -0.89
TNFRSF10B-208ENST00000523752 SCAND2PQ9GZW5 306 aaPredicted RBP9.47□□□□□ -0.89
TNFRSF10B-208ENST00000523752 DNAJC25Q9H1X3 360 aa9.47□□□□□ -0.89
TNFRSF10B-208ENST00000523752 CLSTN2Q9H4D0 955 aa9.47□□□□□ -0.89
TNFRSF10B-208ENST00000523752 MYH15Q9Y2K3 1946 aa9.47□□□□□ -0.89
TNFRSF10B-208ENST00000523752 A0A087WZG4 1122 aa9.46□□□□□ -0.89
TNFRSF10B-208ENST00000523752 CYP27B1O15528 508 aa9.46□□□□□ -0.89
TNFRSF10B-208ENST00000523752 RBM43Q6ZSC3 357 aaKnown RBP9.46□□□□□ -0.89
TNFRSF10B-208ENST00000523752 CABLES1Q8TDN4 633 aa9.46□□□□□ -0.89
TNFRSF10B-208ENST00000523752 PRIMPOLQ96LW4 560 aa9.46□□□□□ -0.89
TNFRSF10B-208ENST00000523752 ZNF142P52746 1687 aaPredicted RBP9.46□□□□□ -0.89
TNFRSF10B-208ENST00000523752 A0A0G2JS52 829 aa9.46□□□□□ -0.9
TNFRSF10B-208ENST00000523752 CASP7P55210 303 aa9.46□□□□□ -0.9
TNFRSF10B-208ENST00000523752 HMGN5P82970 282 aaKnown RBP9.46□□□□□ -0.9
TNFRSF10B-208ENST00000523752 RABL6Q3YEC7 729 aaPredicted RBP9.46□□□□□ -0.9
TNFRSF10B-208ENST00000523752 ZNF335Q9H4Z2 1342 aaPredicted RBP9.46□□□□□ -0.9
TNFRSF10B-208ENST00000523752 CTDNEP1O95476 244 aa9.46□□□□□ -0.9
TNFRSF10B-208ENST00000523752 GTF2F1P35269 517 aaKnown RBP eCLIP9.46□□□□□ -0.9
TNFRSF10B-208ENST00000523752 CCDC186Q7Z3E2 898 aa9.46□□□□□ -0.9
TNFRSF10B-208ENST00000523752 MAP7D2Q96T17 732 aa9.46□□□□□ -0.9
TNFRSF10B-208ENST00000523752 HAUS7Q99871 368 aa9.46□□□□□ -0.9
TNFRSF10B-208ENST00000523752 BCL11BQ9C0K0 894 aaPredicted RBP9.46□□□□□ -0.9
TNFRSF10B-208ENST00000523752 NCOA5Q9HCD5 579 aaKnown RBP9.46□□□□□ -0.9
TNFRSF10B-208ENST00000523752 ALS2Q96Q42 1657 aa9.45□□□□□ -0.9
TNFRSF10B-208ENST00000523752 ADD1P35611 737 aaKnown RBP9.45□□□□□ -0.9
TNFRSF10B-208ENST00000523752 APOBRQ0VD83 1088 aa9.45□□□□□ -0.9
TNFRSF10B-208ENST00000523752 CHRNA2Q15822 529 aa9.45□□□□□ -0.9
TNFRSF10B-208ENST00000523752 LMBR1LQ6UX01 489 aa9.45□□□□□ -0.9
TNFRSF10B-208ENST00000523752 CHST3Q7LGC8 479 aa9.45□□□□□ -0.9
TNFRSF10B-208ENST00000523752 HOMEZQ8IX15 550 aa9.45□□□□□ -0.9
TNFRSF10B-208ENST00000523752 GOLIM4O00461 696 aa9.45□□□□□ -0.9
TNFRSF10B-208ENST00000523752 RIOK3O14730 519 aaKnown RBP9.45□□□□□ -0.9
TNFRSF10B-208ENST00000523752 MCMDC2Q4G0Z9 681 aa9.45□□□□□ -0.9
TNFRSF10B-208ENST00000523752 BCL2L12Q9HB09 334 aa9.45□□□□□ -0.9
TNFRSF10B-208ENST00000523752 H3BQV1 296 aa9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 SNRPA1P09661 255 aaKnown RBP9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 TIMM10P62072 90 aa9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 CCT2P78371 535 aaKnown RBP9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 CCDC144BQ3MJ40 725 aa9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 IFFO2Q5TF58 517 aa9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 C11orf57Q6ZUT1 292 aaPredicted RBP9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 PLA2G4DQ86XP0 818 aa9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 CCDC144CPQ8IYA2 1237 aa9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 NSUN7Q8NE18 718 aaKnown RBP9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 GOLPH3LQ9H4A5 285 aa9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 DDX19AQ9NUU7 478 aaKnown RBP9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 GUCY1B3Q02153 619 aa9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 KRT32Q14532 448 aa9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 ATG9AQ7Z3C6 839 aa9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 TTC5Q8N0Z6 440 aa9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 ERCC4Q92889 916 aaPredicted RBP9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 PRDM10Q9NQV6 1147 aa9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 U3KPZ7 1027 aaPredicted RBP9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 C1orf167Q5SNV9 1468 aa9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 TATP17735 454 aaPredicted RBP9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 ZNF165P49910 485 aa9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 ZNF75DP51815 510 aa9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 FOXO4P98177 505 aa9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 KBTBD3Q8NAB2 608 aa9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 SMARCC2Q8TAQ2 1214 aa9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 ZNF594Q96JF6 807 aaPredicted RBP9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 NEUROD6Q96NK8 337 aa9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 TRIM5Q9C035 493 aa9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 KIF3AQ9Y496 699 aa9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 KIF1AQ12756 1690 aa9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 COL18A1P39060 1754 aa9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 TJP1Q07157 1748 aa9.44□□□□□ -0.9
TNFRSF10B-208ENST00000523752 NBPF26B4DH59 902 aa9.43□□□□□ -0.9
TNFRSF10B-208ENST00000523752 ARID5BQ14865 1188 aa9.43□□□□□ -0.9
TNFRSF10B-208ENST00000523752 NBPF14Q5TI25 921 aa9.43□□□□□ -0.9
TNFRSF10B-208ENST00000523752 NBPF10Q6P3W6 841 aaKnown RBP9.43□□□□□ -0.9
TNFRSF10B-208ENST00000523752 NBPF15Q8N660 670 aa9.43□□□□□ -0.9
TNFRSF10B-208ENST00000523752 TDRD7Q8NHU6 1098 aaKnown RBP9.43□□□□□ -0.9
TNFRSF10B-208ENST00000523752 GPHNQ9NQX3 736 aaPredicted RBP9.43□□□□□ -0.9
TNFRSF10B-208ENST00000523752 PTPDC1A2A3K4 754 aa9.43□□□□□ -0.9
TNFRSF10B-208ENST00000523752 LRRC24Q50LG9 513 aa9.43□□□□□ -0.9
TNFRSF10B-208ENST00000523752 TTLL5Q6EMB2 1281 aa9.43□□□□□ -0.9
TNFRSF10B-208ENST00000523752 TTLL7Q6ZT98 887 aa9.43□□□□□ -0.9
TNFRSF10B-208ENST00000523752 IFNL2Q8IZJ0 200 aa9.43□□□□□ -0.9
TNFRSF10B-208ENST00000523752 C16orf45Q96MC5 204 aaPredicted RBP9.43□□□□□ -0.9
TNFRSF10B-208ENST00000523752 SH3TC1Q8TE82 1336 aa9.43□□□□□ -0.9
TNFRSF10B-208ENST00000523752 PFKFB2O60825 505 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms