RNA–Protein interactions for RNA: ENST00000521590.5

SDC2-206, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-206ENST00000521590 GPRC5DQ9NZD1 345 aa7.18□□□□□ -1.26
SDC2-206ENST00000521590 STXBP5LQ9Y2K9 1186 aa7.18□□□□□ -1.26
SDC2-206ENST00000521590 SCN7AQ01118 1682 aa7.18□□□□□ -1.26
SDC2-206ENST00000521590 COL15A1P39059 1388 aa7.18□□□□□ -1.26
SDC2-206ENST00000521590 GPR25O00155 361 aa7.17□□□□□ -1.26
SDC2-206ENST00000521590 LCE2BO14633 110 aa7.17□□□□□ -1.26
SDC2-206ENST00000521590 EIF6P56537 245 aaKnown RBP7.17□□□□□ -1.26
SDC2-206ENST00000521590 C6orf132Q5T0Z8 1188 aa7.17□□□□□ -1.26
SDC2-206ENST00000521590 TBC1D9BQ66K14 1250 aa7.17□□□□□ -1.26
SDC2-206ENST00000521590 CDC37L1Q7L3B6 337 aa7.17□□□□□ -1.26
SDC2-206ENST00000521590 HDGFL2Q7Z4V5 671 aaPredicted RBP7.17□□□□□ -1.26
SDC2-206ENST00000521590 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.17□□□□□ -1.26
SDC2-206ENST00000521590 RTKN2Q8IZC4 609 aa7.17□□□□□ -1.26
SDC2-206ENST00000521590 ZC3H15Q8WU90 426 aaKnown RBP7.17□□□□□ -1.26
SDC2-206ENST00000521590 COG3Q96JB2 828 aa7.17□□□□□ -1.26
SDC2-206ENST00000521590 KDM3BQ7LBC6 1761 aa7.16□□□□□ -1.26
SDC2-206ENST00000521590 CYP19A1P11511 503 aaPredicted RBP7.16□□□□□ -1.26
SDC2-206ENST00000521590 Q6ZNB5 142 aa7.16□□□□□ -1.26
SDC2-206ENST00000521590 JDP2Q8WYK2 163 aa7.16□□□□□ -1.26
SDC2-206ENST00000521590 TRIM6-TRIM34B2RNG4 842 aa7.15□□□□□ -1.26
SDC2-206ENST00000521590 KCNC4Q03721 635 aa7.15□□□□□ -1.26
SDC2-206ENST00000521590 NYAP1Q6ZVC0 841 aa7.15□□□□□ -1.26
SDC2-206ENST00000521590 USP48Q86UV5 1035 aa7.15□□□□□ -1.26
SDC2-206ENST00000521590 DNAJC10Q8IXB1 793 aa7.15□□□□□ -1.26
SDC2-206ENST00000521590 PSMD1Q99460 953 aa7.15□□□□□ -1.26
SDC2-206ENST00000521590 R3HDMLQ9H3Y0 253 aa7.15□□□□□ -1.26
SDC2-206ENST00000521590 GBA2Q9HCG7 927 aaPredicted RBP7.15□□□□□ -1.26
SDC2-206ENST00000521590 KLRG2A4D1S0 409 aaPredicted RBP7.14□□□□□ -1.27
SDC2-206ENST00000521590 DPYSL4O14531 572 aa7.14□□□□□ -1.27
SDC2-206ENST00000521590 FLT4P35916 1363 aa7.14□□□□□ -1.27
SDC2-206ENST00000521590 CAMK2BQ13554 666 aa7.14□□□□□ -1.27
SDC2-206ENST00000521590 C2orf69Q8N8R5 385 aa7.14□□□□□ -1.27
SDC2-206ENST00000521590 TMC1Q8TDI8 760 aa7.14□□□□□ -1.27
SDC2-206ENST00000521590 ARMC5Q96C12 935 aa7.14□□□□□ -1.27
SDC2-206ENST00000521590 ZBTB1Q9Y2K1 713 aa7.14□□□□□ -1.27
SDC2-206ENST00000521590 KIF24Q5T7B8 1368 aa7.13□□□□□ -1.27
SDC2-206ENST00000521590 A0A1W2PPC1 479 aa7.13□□□□□ -1.27
SDC2-206ENST00000521590 FKTNO75072 461 aa7.13□□□□□ -1.27
SDC2-206ENST00000521590 TM4SF4P48230 202 aa7.13□□□□□ -1.27
SDC2-206ENST00000521590 CABP4P57796 275 aa7.13□□□□□ -1.27
SDC2-206ENST00000521590 Q7L0L9 218 aa7.13□□□□□ -1.27
SDC2-206ENST00000521590 OTOP1Q7RTM1 612 aa7.13□□□□□ -1.27
SDC2-206ENST00000521590 RASAL3Q86YV0 1011 aa7.13□□□□□ -1.27
SDC2-206ENST00000521590 DEFB123Q8N688 67 aa7.13□□□□□ -1.27
SDC2-206ENST00000521590 NFATC2IPQ8NCF5 419 aa7.13□□□□□ -1.27
SDC2-206ENST00000521590 TRPM4Q8TD43 1214 aa7.13□□□□□ -1.27
SDC2-206ENST00000521590 FAM122AQ96E09 287 aa7.13□□□□□ -1.27
SDC2-206ENST00000521590 CFHR5Q9BXR6 569 aa7.13□□□□□ -1.27
SDC2-206ENST00000521590 MTMR10Q9NXD2 777 aa7.13□□□□□ -1.27
SDC2-206ENST00000521590 TERF2IPQ9NYB0 399 aa7.13□□□□□ -1.27
SDC2-206ENST00000521590 MRC1P22897 1456 aa7.12□□□□□ -1.27
SDC2-206ENST00000521590 NPR1P16066 1061 aa7.12□□□□□ -1.27
SDC2-206ENST00000521590 GMPSP49915 693 aaPredicted RBP7.12□□□□□ -1.27
SDC2-206ENST00000521590 EIF5P55010 431 aaKnown RBP7.12□□□□□ -1.27
SDC2-206ENST00000521590 SNX27Q96L92 541 aa7.12□□□□□ -1.27
SDC2-206ENST00000521590 EYA1Q99502 592 aa7.12□□□□□ -1.27
SDC2-206ENST00000521590 EPAS1Q99814 870 aa7.12□□□□□ -1.27
SDC2-206ENST00000521590 TSR3Q9UJK0 312 aaKnown RBP7.12□□□□□ -1.27
SDC2-206ENST00000521590 PTPN22Q9Y2R2 807 aa7.12□□□□□ -1.27
SDC2-206ENST00000521590 TRIM17Q9Y577 477 aa7.12□□□□□ -1.27
SDC2-206ENST00000521590 LAMB1P07942 1786 aa7.12□□□□□ -1.27
SDC2-206ENST00000521590 KIF20BQ96Q89 1820 aa7.11□□□□□ -1.27
SDC2-206ENST00000521590 UBR2Q8IWV8 1755 aa7.11□□□□□ -1.27
SDC2-206ENST00000521590 SHTN1A0MZ66 631 aa7.11□□□□□ -1.27
SDC2-206ENST00000521590 CXCL9Q07325 125 aa7.11□□□□□ -1.27
SDC2-206ENST00000521590 CNBD1Q8NA66 436 aa7.11□□□□□ -1.27
SDC2-206ENST00000521590 DDX12PQ92771 950 aa7.11□□□□□ -1.27
SDC2-206ENST00000521590 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.11□□□□□ -1.27
SDC2-206ENST00000521590 NPC1L1Q9UHC9 1359 aa7.1□□□□□ -1.27
SDC2-206ENST00000521590 WTIPA6NIX2 430 aaPredicted RBP7.1□□□□□ -1.27
SDC2-206ENST00000521590 FYB1O15117 783 aa7.1□□□□□ -1.27
SDC2-206ENST00000521590 TSR1Q2NL82 804 aaKnown RBP7.1□□□□□ -1.27
SDC2-206ENST00000521590 LARGE2Q8N3Y3 721 aa7.1□□□□□ -1.27
SDC2-206ENST00000521590 ZNF333Q96JL9 665 aa7.1□□□□□ -1.27
SDC2-206ENST00000521590 ZNF646O15015 1829 aaPredicted RBP7.1□□□□□ -1.27
SDC2-206ENST00000521590 ALPK3Q96L96 1907 aa7.09□□□□□ -1.27
SDC2-206ENST00000521590 CDHR2Q9BYE9 1310 aa7.09□□□□□ -1.27
SDC2-206ENST00000521590 ADM5C9JUS6 153 aa7.09□□□□□ -1.27
SDC2-206ENST00000521590 HSP90AB1P08238 724 aaKnown RBP7.09□□□□□ -1.27
SDC2-206ENST00000521590 CANXP27824 592 aaKnown RBP7.09□□□□□ -1.27
SDC2-206ENST00000521590 ST5P78524 1137 aa7.09□□□□□ -1.27
SDC2-206ENST00000521590 CAP1Q01518 475 aa7.09□□□□□ -1.27
SDC2-206ENST00000521590 KRT26Q7Z3Y9 468 aa7.09□□□□□ -1.27
SDC2-206ENST00000521590 SLC51AQ86UW1 340 aa7.09□□□□□ -1.27
SDC2-206ENST00000521590 SETDB2Q96T68 719 aa7.09□□□□□ -1.27
SDC2-206ENST00000521590 GGNBP2Q9H3C7 697 aa7.09□□□□□ -1.27
SDC2-206ENST00000521590 TTC28Q96AY4 2481 aa7.08□□□□□ -1.28
SDC2-206ENST00000521590 C3orf80F5H4A9 247 aa7.08□□□□□ -1.28
SDC2-206ENST00000521590 EGFRP00533 1210 aa7.08□□□□□ -1.28
SDC2-206ENST00000521590 ALDH1B1P30837 517 aa7.08□□□□□ -1.28
SDC2-206ENST00000521590 DPF3Q92784 378 aa7.08□□□□□ -1.28
SDC2-206ENST00000521590 CNOT7Q9UIV1 285 aaKnown RBP7.08□□□□□ -1.28
SDC2-206ENST00000521590 TBC1D2BQ9UPU7 963 aa7.08□□□□□ -1.28
SDC2-206ENST00000521590 EMILIN1Q9Y6C2 1016 aa7.08□□□□□ -1.28
SDC2-206ENST00000521590 TAF1P21675 1872 aa7.08□□□□□ -1.28
SDC2-206ENST00000521590 CDH23Q9H251 3354 aa7.08□□□□□ -1.28
SDC2-206ENST00000521590 CACNA1AO00555 2505 aa7.07□□□□□ -1.28
SDC2-206ENST00000521590 SYNGAP1Q96PV0 1343 aa7.07□□□□□ -1.28
SDC2-206ENST00000521590 ZBTB7BO15156 539 aaPredicted RBP7.07□□□□□ -1.28
SDC2-206ENST00000521590 UBE2Q1Q7Z7E8 422 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms