RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 KRT26Q7Z3Y9 468 aa19.26■□□□□ 0.67
PRKDC-204ENST00000521331 CCDC191Q8NCU4 936 aa19.26■□□□□ 0.67
PRKDC-204ENST00000521331 RTL9Q8NET4 1388 aa19.25■□□□□ 0.67
PRKDC-204ENST00000521331 HUNKP57058 714 aa19.25■□□□□ 0.67
PRKDC-204ENST00000521331 CCDC152Q4G0S7 254 aa19.25■□□□□ 0.67
PRKDC-204ENST00000521331 DCPSQ96C86 337 aaKnown RBP19.25■□□□□ 0.67
PRKDC-204ENST00000521331 PHAXQ9H814 394 aaKnown RBP19.25■□□□□ 0.67
PRKDC-204ENST00000521331 TSKSQ9UJT2 592 aa19.25■□□□□ 0.67
PRKDC-204ENST00000521331 TAF1P21675 1872 aa19.24■□□□□ 0.67
PRKDC-204ENST00000521331 G3V3G9 751 aa19.24■□□□□ 0.67
PRKDC-204ENST00000521331 PCCAP05165 728 aaPredicted RBP19.24■□□□□ 0.67
PRKDC-204ENST00000521331 VIL1P09327 827 aaKnown RBP19.24■□□□□ 0.67
PRKDC-204ENST00000521331 DCAF8Q5TAQ9 597 aa19.24■□□□□ 0.67
PRKDC-204ENST00000521331 MYD88Q99836 296 aa19.24■□□□□ 0.67
PRKDC-204ENST00000521331 PRKRIP1Q9H875 184 aaPredicted RBP19.24■□□□□ 0.67
PRKDC-204ENST00000521331 KCNQ5Q9NR82 932 aa19.24■□□□□ 0.67
PRKDC-204ENST00000521331 ANKIB1Q9P2G1 1089 aa19.24■□□□□ 0.67
PRKDC-204ENST00000521331 GGA1Q9UJY5 639 aa19.24■□□□□ 0.67
PRKDC-204ENST00000521331 APAF1O14727 1248 aa19.23■□□□□ 0.67
PRKDC-204ENST00000521331 UFL1O94874 794 aa19.23■□□□□ 0.67
PRKDC-204ENST00000521331 DDX58O95786 925 aaKnown RBP19.23■□□□□ 0.67
PRKDC-204ENST00000521331 EGFRP00533 1210 aa19.23■□□□□ 0.67
PRKDC-204ENST00000521331 RBM26Q5T8P6 1007 aaKnown RBP19.23■□□□□ 0.67
PRKDC-204ENST00000521331 C2orf69Q8N8R5 385 aa19.23■□□□□ 0.67
PRKDC-204ENST00000521331 GBA2Q9HCG7 927 aaPredicted RBP19.23■□□□□ 0.67
PRKDC-204ENST00000521331 SEC31BQ9NQW1 1179 aa19.23■□□□□ 0.67
PRKDC-204ENST00000521331 CWC25Q9NXE8 425 aaPredicted RBP19.23■□□□□ 0.67
PRKDC-204ENST00000521331 COL4A1P02462 1669 aa19.22■□□□□ 0.67
PRKDC-204ENST00000521331 ELL2O00472 640 aaPredicted RBP19.22■□□□□ 0.67
PRKDC-204ENST00000521331 PDE8AO60658 829 aa19.22■□□□□ 0.67
PRKDC-204ENST00000521331 KIF4BQ2VIQ3 1234 aa19.22■□□□□ 0.67
PRKDC-204ENST00000521331 RGMBQ6NW40 437 aa19.22■□□□□ 0.67
PRKDC-204ENST00000521331 CCDC85CA6NKD9 419 aa19.21■□□□□ 0.67
PRKDC-204ENST00000521331 CCDC30Q5VVM6 783 aa19.21■□□□□ 0.67
PRKDC-204ENST00000521331 METTL22Q9BUU2 404 aaPredicted RBP19.21■□□□□ 0.67
PRKDC-204ENST00000521331 ADM5C9JUS6 153 aa19.2■□□□□ 0.66
PRKDC-204ENST00000521331 DLK2Q6UY11 383 aa19.2■□□□□ 0.66
PRKDC-204ENST00000521331 SULF1Q8IWU6 871 aa19.2■□□□□ 0.66
PRKDC-204ENST00000521331 AGBL3Q8NEM8 1001 aa19.2■□□□□ 0.66
PRKDC-204ENST00000521331 CCDC102AQ96A19 550 aa19.2■□□□□ 0.66
PRKDC-204ENST00000521331 XDHP47989 1333 aa19.2■□□□□ 0.66
PRKDC-204ENST00000521331 ZNF609O15014 1411 aa19.19■□□□□ 0.66
PRKDC-204ENST00000521331 RSBN1LQ6PCB5 846 aaPredicted RBP19.19■□□□□ 0.66
PRKDC-204ENST00000521331 ANKRD18AQ8IVF6 992 aa19.19■□□□□ 0.66
PRKDC-204ENST00000521331 C8orf58Q8NAV2 365 aa19.19■□□□□ 0.66
PRKDC-204ENST00000521331 GGA3Q9NZ52 723 aa19.19■□□□□ 0.66
PRKDC-204ENST00000521331 ZNF280AP59817 542 aaPredicted RBP19.18■□□□□ 0.66
PRKDC-204ENST00000521331 FAM161AQ3B820 660 aa19.18■□□□□ 0.66
PRKDC-204ENST00000521331 ZIC5Q96T25 663 aa19.18■□□□□ 0.66
PRKDC-204ENST00000521331 MCOLN1Q9GZU1 580 aa19.18■□□□□ 0.66
PRKDC-204ENST00000521331 FAM155AB1AL88 458 aaPredicted RBP19.17■□□□□ 0.66
PRKDC-204ENST00000521331 ATP2B4P23634 1241 aa19.17■□□□□ 0.66
PRKDC-204ENST00000521331 CCDC85AQ96PX6 553 aaPredicted RBP19.17■□□□□ 0.66
PRKDC-204ENST00000521331 CDC5LQ99459 802 aaKnown RBP19.17■□□□□ 0.66
PRKDC-204ENST00000521331 SAGE1Q9NXZ1 904 aa19.17■□□□□ 0.66
PRKDC-204ENST00000521331 RGS19P49795 217 aa19.16■□□□□ 0.66
PRKDC-204ENST00000521331 ZNF157P51786 506 aaPredicted RBP19.16■□□□□ 0.66
PRKDC-204ENST00000521331 PODNQ7Z5L7 613 aa19.16■□□□□ 0.66
PRKDC-204ENST00000521331 JARID2Q92833 1246 aaPredicted RBP19.16■□□□□ 0.66
PRKDC-204ENST00000521331 MAP3K2Q9Y2U5 619 aa19.16■□□□□ 0.66
PRKDC-204ENST00000521331 CTSWP56202 376 aa19.15■□□□□ 0.66
PRKDC-204ENST00000521331 MLLT1Q03111 559 aaPredicted RBP19.15■□□□□ 0.66
PRKDC-204ENST00000521331 SCARF1Q14162 830 aa19.15■□□□□ 0.66
PRKDC-204ENST00000521331 KSR2Q6VAB6 950 aa19.15■□□□□ 0.66
PRKDC-204ENST00000521331 CDCA5Q96FF9 252 aa19.15■□□□□ 0.66
PRKDC-204ENST00000521331 USP17L3A6NCW0 530 aa19.14■□□□□ 0.65
PRKDC-204ENST00000521331 USP17L4A6NCW7 530 aa19.14■□□□□ 0.65
PRKDC-204ENST00000521331 USP17L8P0C7I0 530 aa19.14■□□□□ 0.65
PRKDC-204ENST00000521331 KIF23Q02241 960 aaPredicted RBP19.14■□□□□ 0.65
PRKDC-204ENST00000521331 NEXNQ0ZGT2 675 aa19.14■□□□□ 0.65
PRKDC-204ENST00000521331 DGKZQ13574 1117 aa19.14■□□□□ 0.65
PRKDC-204ENST00000521331 USP17L1Q7RTZ2 530 aa19.14■□□□□ 0.65
PRKDC-204ENST00000521331 GMLQ99445 158 aa19.14■□□□□ 0.65
PRKDC-204ENST00000521331 STK31Q9BXU1 1019 aa19.14■□□□□ 0.65
PRKDC-204ENST00000521331 ASTN2O75129 1339 aaPredicted RBP19.14■□□□□ 0.65
PRKDC-204ENST00000521331 PI4KAP2A4QPH2 592 aa19.13■□□□□ 0.65
PRKDC-204ENST00000521331 IGKV5-2P06315 115 aa19.13■□□□□ 0.65
PRKDC-204ENST00000521331 SLC10A3P09131 477 aa19.13■□□□□ 0.65
PRKDC-204ENST00000521331 FKBP1BP68106 108 aa19.13■□□□□ 0.65
PRKDC-204ENST00000521331 ANGEL2Q5VTE6 544 aaKnown RBP19.13■□□□□ 0.65
PRKDC-204ENST00000521331 PI4KAP1Q8N8J0 262 aa19.13■□□□□ 0.65
PRKDC-204ENST00000521331 MYOZ2Q9NPC6 264 aa19.13■□□□□ 0.65
PRKDC-204ENST00000521331 BSDC1Q9NW68 430 aaPredicted RBP19.13■□□□□ 0.65
PRKDC-204ENST00000521331 PITPNM2Q9BZ72 1349 aa19.13■□□□□ 0.65
PRKDC-204ENST00000521331 SCN9AQ15858 1988 aa19.12■□□□□ 0.65
PRKDC-204ENST00000521331 MED23Q9ULK4 1368 aa19.12■□□□□ 0.65
PRKDC-204ENST00000521331 REM2Q8IYK8 340 aaPredicted RBP19.12■□□□□ 0.65
PRKDC-204ENST00000521331 TSPYL6Q8N831 410 aa19.12■□□□□ 0.65
PRKDC-204ENST00000521331 TTLL11Q8NHH1 800 aa19.12■□□□□ 0.65
PRKDC-204ENST00000521331 MINPP1Q9UNW1 487 aa19.11■□□□□ 0.65
PRKDC-204ENST00000521331 GREM2Q9H772 168 aa19.1■□□□□ 0.65
PRKDC-204ENST00000521331 RNF186Q9NXI6 227 aa19.1■□□□□ 0.65
PRKDC-204ENST00000521331 NEURL1BA8MQ27 555 aa19.09■□□□□ 0.65
PRKDC-204ENST00000521331 TRPA1O75762 1119 aa19.09■□□□□ 0.65
PRKDC-204ENST00000521331 CCT4P50991 539 aaKnown RBP19.09■□□□□ 0.65
PRKDC-204ENST00000521331 CCDC27Q2M243 656 aa19.09■□□□□ 0.65
PRKDC-204ENST00000521331 TSR2Q969E8 191 aaKnown RBP19.09■□□□□ 0.65
PRKDC-204ENST00000521331 CSRNP1Q96S65 589 aa19.09■□□□□ 0.65
PRKDC-204ENST00000521331 CASP8AP2Q9UKL3 1982 aa19.08■□□□□ 0.65
PRKDC-204ENST00000521331 MYO3BQ8WXR4 1341 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms