RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 GGA1Q9UJY5 639 aa20.47■□□□□ 0.87
TNPO1-212ENST00000520850 DUOX1Q9NRD9 1551 aa20.46■□□□□ 0.87
TNPO1-212ENST00000520850 KIF3CO14782 793 aa20.46■□□□□ 0.87
TNPO1-212ENST00000520850 VEGFAP15692 232 aaPredicted RBP20.46■□□□□ 0.87
TNPO1-212ENST00000520850 NIM1KQ8IY84 436 aa20.46■□□□□ 0.87
TNPO1-212ENST00000520850 GPC2Q8N158 579 aa20.46■□□□□ 0.87
TNPO1-212ENST00000520850 FRAT1Q92837 279 aaPredicted RBP20.46■□□□□ 0.87
TNPO1-212ENST00000520850 BICC1Q9H694 974 aaKnown RBP20.46■□□□□ 0.87
TNPO1-212ENST00000520850 ZNRF3Q9ULT6 936 aa20.46■□□□□ 0.87
TNPO1-212ENST00000520850 LEMD3Q9Y2U8 911 aa20.46■□□□□ 0.87
TNPO1-212ENST00000520850 GNAI3P08754 354 aa20.45■□□□□ 0.86
TNPO1-212ENST00000520850 EIF6P56537 245 aaKnown RBP20.45■□□□□ 0.86
TNPO1-212ENST00000520850 AOC3Q16853 763 aa20.45■□□□□ 0.86
TNPO1-212ENST00000520850 ANKRD44Q8N8A2 993 aa20.45■□□□□ 0.86
TNPO1-212ENST00000520850 ZNF526Q8TF50 670 aaPredicted RBP20.45■□□□□ 0.86
TNPO1-212ENST00000520850 WDR90Q96KV7 1748 aa20.44■□□□□ 0.86
TNPO1-212ENST00000520850 C6orf229H3BNL8 230 aa20.44■□□□□ 0.86
TNPO1-212ENST00000520850 UBTFL1P0CB47 393 aaPredicted RBP20.44■□□□□ 0.86
TNPO1-212ENST00000520850 MS4A1P11836 297 aa20.44■□□□□ 0.86
TNPO1-212ENST00000520850 ZC3H12CQ9C0D7 883 aaKnown RBP20.44■□□□□ 0.86
TNPO1-212ENST00000520850 RRAGCQ9HB90 399 aa20.43■□□□□ 0.86
TNPO1-212ENST00000520850 NMRK2Q9NPI5 230 aa20.43■□□□□ 0.86
TNPO1-212ENST00000520850 CHMP3Q9Y3E7 222 aa20.43■□□□□ 0.86
TNPO1-212ENST00000520850 COL4A5P29400 1685 aa20.42■□□□□ 0.86
TNPO1-212ENST00000520850 POTECB2RU33 542 aa20.42■□□□□ 0.86
TNPO1-212ENST00000520850 TOMM70O94826 608 aa20.42■□□□□ 0.86
TNPO1-212ENST00000520850 DDNO94850 711 aaPredicted RBP20.42■□□□□ 0.86
TNPO1-212ENST00000520850 LDHAL6AQ6ZMR3 332 aa20.42■□□□□ 0.86
TNPO1-212ENST00000520850 DZIP1LQ8IYY4 767 aaKnown RBP20.42■□□□□ 0.86
TNPO1-212ENST00000520850 IQCA1LA6NCM1 817 aa20.41■□□□□ 0.86
TNPO1-212ENST00000520850 UFL1O94874 794 aa20.41■□□□□ 0.86
TNPO1-212ENST00000520850 CHRNDQ07001 517 aa20.41■□□□□ 0.86
TNPO1-212ENST00000520850 C15orf52Q6ZUT6 534 aaKnown RBP20.41■□□□□ 0.86
TNPO1-212ENST00000520850 FBXO3Q9UK99 471 aa20.41■□□□□ 0.86
TNPO1-212ENST00000520850 RCAN3Q9UKA8 241 aa20.41■□□□□ 0.86
TNPO1-212ENST00000520850 CXCL9Q07325 125 aa20.4■□□□□ 0.86
TNPO1-212ENST00000520850 TNIP1Q15025 636 aa20.4■□□□□ 0.86
TNPO1-212ENST00000520850 TAF7LQ5H9L4 462 aa20.4■□□□□ 0.86
TNPO1-212ENST00000520850 PODNQ7Z5L7 613 aa20.4■□□□□ 0.86
TNPO1-212ENST00000520850 MEIS3Q99687 375 aa20.4■□□□□ 0.86
TNPO1-212ENST00000520850 ZNF541Q9H0D2 1346 aa20.4■□□□□ 0.86
TNPO1-212ENST00000520850 MED23Q9ULK4 1368 aa20.4■□□□□ 0.86
TNPO1-212ENST00000520850 RIPOR2Q9Y4F9 1068 aa20.4■□□□□ 0.86
TNPO1-212ENST00000520850 MTX1Q13505 466 aa20.39■□□□□ 0.85
TNPO1-212ENST00000520850 TMEM57Q8N5G2 664 aa20.39■□□□□ 0.85
TNPO1-212ENST00000520850 SCN4AP35499 1836 aa20.39■□□□□ 0.85
TNPO1-212ENST00000520850 ZNF804BA4D1E1 1349 aa20.38■□□□□ 0.85
TNPO1-212ENST00000520850 MROH5Q6ZUA9 1318 aa20.38■□□□□ 0.85
TNPO1-212ENST00000520850 RFX5P48382 616 aaPredicted RBP20.38■□□□□ 0.85
TNPO1-212ENST00000520850 C1QTNF8P60827 252 aa20.38■□□□□ 0.85
TNPO1-212ENST00000520850 CIAPIN1Q6FI81 312 aa20.38■□□□□ 0.85
TNPO1-212ENST00000520850 FTSJ3Q8IY81 847 aaKnown RBP20.38■□□□□ 0.85
TNPO1-212ENST00000520850 RBM46Q8TBY0 533 aaKnown RBP20.38■□□□□ 0.85
TNPO1-212ENST00000520850 CLUAP1Q96AJ1 413 aa20.38■□□□□ 0.85
TNPO1-212ENST00000520850 ZNF594Q96JF6 807 aaPredicted RBP20.38■□□□□ 0.85
TNPO1-212ENST00000520850 CNNM1Q9NRU3 951 aa20.38■□□□□ 0.85
TNPO1-212ENST00000520850 YDJCA8MPS7 323 aa20.37■□□□□ 0.85
TNPO1-212ENST00000520850 RIMBP2O15034 1052 aa20.37■□□□□ 0.85
TNPO1-212ENST00000520850 TNNQ9UQP3 1299 aa20.37■□□□□ 0.85
TNPO1-212ENST00000520850 LRRFIP2Q9Y608 721 aaKnown RBP20.37■□□□□ 0.85
TNPO1-212ENST00000520850 ZBTB7BO15156 539 aaPredicted RBP20.36■□□□□ 0.85
TNPO1-212ENST00000520850 ECE2O60344 883 aa20.36■□□□□ 0.85
TNPO1-212ENST00000520850 GNAI2P04899 355 aa20.36■□□□□ 0.85
TNPO1-212ENST00000520850 UBE4AQ14139 1066 aa20.36■□□□□ 0.85
TNPO1-212ENST00000520850 C16orf71Q8IYS4 520 aaPredicted RBP20.36■□□□□ 0.85
TNPO1-212ENST00000520850 SPEF2Q9C093 1822 aa20.35■□□□□ 0.85
TNPO1-212ENST00000520850 PTPN12Q05209 780 aaKnown RBP20.35■□□□□ 0.85
TNPO1-212ENST00000520850 DPF2Q92785 391 aa20.35■□□□□ 0.85
TNPO1-212ENST00000520850 COA1Q9GZY4 146 aa20.35■□□□□ 0.85
TNPO1-212ENST00000520850 HACL1Q9UJ83 578 aa20.35■□□□□ 0.85
TNPO1-212ENST00000520850 IRS2Q9Y4H2 1338 aa20.34■□□□□ 0.85
TNPO1-212ENST00000520850 RPS12P25398 132 aaKnown RBP20.34■□□□□ 0.85
TNPO1-212ENST00000520850 FSTL1Q12841 308 aa20.34■□□□□ 0.85
TNPO1-212ENST00000520850 PNMA8AQ86V59 439 aaPredicted RBP20.34■□□□□ 0.85
TNPO1-212ENST00000520850 TAF1DQ9H5J8 278 aaPredicted RBP20.34■□□□□ 0.85
TNPO1-212ENST00000520850 DBNDD1Q9H9R9 158 aa20.34■□□□□ 0.85
TNPO1-212ENST00000520850 COPRSQ9NQ92 184 aa20.34■□□□□ 0.85
TNPO1-212ENST00000520850 G3V3G9 751 aa20.33■□□□□ 0.85
TNPO1-212ENST00000520850 EYA2O00167 538 aa20.33■□□□□ 0.85
TNPO1-212ENST00000520850 CIAO1O76071 339 aa20.33■□□□□ 0.85
TNPO1-212ENST00000520850 VIL1P09327 827 aaKnown RBP20.33■□□□□ 0.85
TNPO1-212ENST00000520850 RLBP1P12271 317 aa20.33■□□□□ 0.85
TNPO1-212ENST00000520850 SCNN1DP51172 638 aa20.33■□□□□ 0.85
TNPO1-212ENST00000520850 PDE3AQ14432 1141 aa20.33■□□□□ 0.85
TNPO1-212ENST00000520850 DOK7Q18PE1 504 aa20.33■□□□□ 0.85
TNPO1-212ENST00000520850 DCAF8Q5TAQ9 597 aa20.33■□□□□ 0.85
TNPO1-212ENST00000520850 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.33■□□□□ 0.85
TNPO1-212ENST00000520850 PUS3Q9BZE2 481 aaKnown RBP20.33■□□□□ 0.85
TNPO1-212ENST00000520850 GJA3Q9Y6H8 435 aa20.33■□□□□ 0.85
TNPO1-212ENST00000520850 ZNF609O15014 1411 aa20.33■□□□□ 0.84
TNPO1-212ENST00000520850 WTIPA6NIX2 430 aaPredicted RBP20.32■□□□□ 0.84
TNPO1-212ENST00000520850 TAF5LO75529 589 aa20.32■□□□□ 0.84
TNPO1-212ENST00000520850 KCNJ4P48050 445 aa20.32■□□□□ 0.84
TNPO1-212ENST00000520850 MMP14P50281 582 aa20.32■□□□□ 0.84
TNPO1-212ENST00000520850 GPR101Q96P66 508 aaPredicted RBP20.32■□□□□ 0.84
TNPO1-212ENST00000520850 CHMP4BQ9H444 224 aaKnown RBP20.32■□□□□ 0.84
TNPO1-212ENST00000520850 GPRC5DQ9NZD1 345 aa20.32■□□□□ 0.84
TNPO1-212ENST00000520850 RAD17O75943 681 aa20.31■□□□□ 0.84
TNPO1-212ENST00000520850 PDE8BO95263 885 aa20.31■□□□□ 0.84
TNPO1-212ENST00000520850 LMOD1P29536 600 aaPredicted RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms