RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 TRPM7Q96QT4 1865 aa19.52■□□□□ 0.71
CSMD1-207ENST00000520451 UFL1O94874 794 aa19.51■□□□□ 0.71
CSMD1-207ENST00000520451 CELF2O95319 508 aaKnown RBP19.51■□□□□ 0.71
CSMD1-207ENST00000520451 ECE1P42892 770 aa19.51■□□□□ 0.71
CSMD1-207ENST00000520451 MAP2K1Q02750 393 aaPredicted RBP19.51■□□□□ 0.71
CSMD1-207ENST00000520451 KSR2Q6VAB6 950 aa19.51■□□□□ 0.71
CSMD1-207ENST00000520451 DPF2Q92785 391 aa19.51■□□□□ 0.71
CSMD1-207ENST00000520451 PRDM10Q9NQV6 1147 aa19.51■□□□□ 0.71
CSMD1-207ENST00000520451 PODXL2Q9NZ53 605 aa19.51■□□□□ 0.71
CSMD1-207ENST00000520451 RTL9Q8NET4 1388 aa19.5■□□□□ 0.71
CSMD1-207ENST00000520451 PI4KAP2A4QPH2 592 aa19.5■□□□□ 0.71
CSMD1-207ENST00000520451 CYP4F22Q6NT55 531 aa19.5■□□□□ 0.71
CSMD1-207ENST00000520451 PI4KAP1Q8N8J0 262 aa19.5■□□□□ 0.71
CSMD1-207ENST00000520451 ZC3H12CQ9C0D7 883 aaKnown RBP19.5■□□□□ 0.71
CSMD1-207ENST00000520451 KCNQ5Q9NR82 932 aa19.5■□□□□ 0.71
CSMD1-207ENST00000520451 GGA1Q9UJY5 639 aa19.5■□□□□ 0.71
CSMD1-207ENST00000520451 IGKV5-2P06315 115 aa19.49■□□□□ 0.71
CSMD1-207ENST00000520451 RPS12P25398 132 aaKnown RBP19.49■□□□□ 0.71
CSMD1-207ENST00000520451 NEXNQ0ZGT2 675 aa19.49■□□□□ 0.71
CSMD1-207ENST00000520451 TWISTNBQ3B726 338 aaPredicted RBP19.49■□□□□ 0.71
CSMD1-207ENST00000520451 CDC37L1Q7L3B6 337 aa19.49■□□□□ 0.71
CSMD1-207ENST00000520451 SAMD7Q7Z3H4 446 aa19.49■□□□□ 0.71
CSMD1-207ENST00000520451 ANKRD18AQ8IVF6 992 aa19.49■□□□□ 0.71
CSMD1-207ENST00000520451 ZNF408Q9H9D4 720 aa19.49■□□□□ 0.71
CSMD1-207ENST00000520451 G3V3G9 751 aa19.48■□□□□ 0.71
CSMD1-207ENST00000520451 LBX1P52954 281 aa19.48■□□□□ 0.71
CSMD1-207ENST00000520451 TBC1D10BQ4KMP7 808 aaPredicted RBP19.48■□□□□ 0.71
CSMD1-207ENST00000520451 DCAF8Q5TAQ9 597 aa19.48■□□□□ 0.71
CSMD1-207ENST00000520451 MRS2Q9HD23 443 aa19.48■□□□□ 0.71
CSMD1-207ENST00000520451 THSD7BQ9C0I4 1608 aa19.47■□□□□ 0.71
CSMD1-207ENST00000520451 CTSWP56202 376 aa19.47■□□□□ 0.71
CSMD1-207ENST00000520451 SAPCD2Q86UD0 394 aa19.47■□□□□ 0.71
CSMD1-207ENST00000520451 IL16Q14005 1332 aa19.47■□□□□ 0.71
CSMD1-207ENST00000520451 EGFRP00533 1210 aa19.46■□□□□ 0.71
CSMD1-207ENST00000520451 SLC4A2P04920 1241 aa19.46■□□□□ 0.71
CSMD1-207ENST00000520451 HSPA8P11142 646 aaKnown RBP19.46■□□□□ 0.71
CSMD1-207ENST00000520451 CWF19L2Q2TBE0 894 aaKnown RBP19.46■□□□□ 0.71
CSMD1-207ENST00000520451 G2E3Q7L622 706 aa19.46■□□□□ 0.71
CSMD1-207ENST00000520451 USP48Q86UV5 1035 aa19.46■□□□□ 0.71
CSMD1-207ENST00000520451 CDC5LQ99459 802 aaKnown RBP19.46■□□□□ 0.71
CSMD1-207ENST00000520451 XDHP47989 1333 aa19.46■□□□□ 0.71
CSMD1-207ENST00000520451 NEURL1BA8MQ27 555 aa19.45■□□□□ 0.7
CSMD1-207ENST00000520451 ZEB1P37275 1124 aaPredicted RBP19.45■□□□□ 0.7
CSMD1-207ENST00000520451 RBM26Q5T8P6 1007 aaKnown RBP19.45■□□□□ 0.7
CSMD1-207ENST00000520451 BEGAINQ9BUH8 593 aa19.45■□□□□ 0.7
CSMD1-207ENST00000520451 ANP32CO43423 234 aa19.44■□□□□ 0.7
CSMD1-207ENST00000520451 AOC2O75106 756 aa19.44■□□□□ 0.7
CSMD1-207ENST00000520451 VIL1P09327 827 aaKnown RBP19.44■□□□□ 0.7
CSMD1-207ENST00000520451 TTLL11Q8NHH1 800 aa19.44■□□□□ 0.7
CSMD1-207ENST00000520451 GREM2Q9H772 168 aa19.44■□□□□ 0.7
CSMD1-207ENST00000520451 FANCIQ9NVI1 1328 aa19.44■□□□□ 0.7
CSMD1-207ENST00000520451 SCN9AQ15858 1988 aa19.43■□□□□ 0.7
CSMD1-207ENST00000520451 ATP2B4P23634 1241 aa19.43■□□□□ 0.7
CSMD1-207ENST00000520451 KIF4BQ2VIQ3 1234 aa19.43■□□□□ 0.7
CSMD1-207ENST00000520451 NCBP3Q53F19 620 aaKnown RBP19.43■□□□□ 0.7
CSMD1-207ENST00000520451 DLK2Q6UY11 383 aa19.43■□□□□ 0.7
CSMD1-207ENST00000520451 UBE3BQ7Z3V4 1068 aa19.43■□□□□ 0.7
CSMD1-207ENST00000520451 KRT26Q7Z3Y9 468 aa19.43■□□□□ 0.7
CSMD1-207ENST00000520451 HHIPL1Q96JK4 782 aa19.43■□□□□ 0.7
CSMD1-207ENST00000520451 SALL2Q9Y467 1007 aaPredicted RBP19.43■□□□□ 0.7
CSMD1-207ENST00000520451 MAP2K2P36507 400 aa19.42■□□□□ 0.7
CSMD1-207ENST00000520451 FLIIQ13045 1269 aa19.42■□□□□ 0.7
CSMD1-207ENST00000520451 DCPSQ96C86 337 aaKnown RBP19.42■□□□□ 0.7
CSMD1-207ENST00000520451 RSBN1LQ6PCB5 846 aaPredicted RBP19.41■□□□□ 0.7
CSMD1-207ENST00000520451 BSDC1Q9NW68 430 aaPredicted RBP19.41■□□□□ 0.7
CSMD1-207ENST00000520451 MINPP1Q9UNW1 487 aa19.41■□□□□ 0.7
CSMD1-207ENST00000520451 ZNF316A6NFI3 1004 aaPredicted RBP19.4■□□□□ 0.7
CSMD1-207ENST00000520451 ADM5C9JUS6 153 aa19.4■□□□□ 0.7
CSMD1-207ENST00000520451 H7C1W4 665 aa19.4■□□□□ 0.7
CSMD1-207ENST00000520451 FKBP5Q13451 457 aaPredicted RBP19.4■□□□□ 0.7
CSMD1-207ENST00000520451 GCKRQ14397 625 aa19.4■□□□□ 0.7
CSMD1-207ENST00000520451 AGBL3Q8NEM8 1001 aa19.4■□□□□ 0.7
CSMD1-207ENST00000520451 WTIPA6NIX2 430 aaPredicted RBP19.39■□□□□ 0.69
CSMD1-207ENST00000520451 HUNKP57058 714 aa19.39■□□□□ 0.69
CSMD1-207ENST00000520451 WDR63Q8IWG1 891 aa19.39■□□□□ 0.69
CSMD1-207ENST00000520451 DNAAF4Q8WXU2 420 aa19.39■□□□□ 0.69
CSMD1-207ENST00000520451 GGA3Q9NZ52 723 aa19.39■□□□□ 0.69
CSMD1-207ENST00000520451 ZNF609O15014 1411 aa19.39■□□□□ 0.69
CSMD1-207ENST00000520451 MYH3P11055 1940 aa19.39■□□□□ 0.69
CSMD1-207ENST00000520451 USP17L3A6NCW0 530 aa19.38■□□□□ 0.69
CSMD1-207ENST00000520451 USP17L4A6NCW7 530 aa19.38■□□□□ 0.69
CSMD1-207ENST00000520451 ASTN2O75129 1339 aaPredicted RBP19.38■□□□□ 0.69
CSMD1-207ENST00000520451 IGHMBP2P38935 993 aaKnown RBP19.38■□□□□ 0.69
CSMD1-207ENST00000520451 ZNF280AP59817 542 aaPredicted RBP19.38■□□□□ 0.69
CSMD1-207ENST00000520451 USP17L1Q7RTZ2 530 aa19.38■□□□□ 0.69
CSMD1-207ENST00000520451 PODNQ7Z5L7 613 aa19.38■□□□□ 0.69
CSMD1-207ENST00000520451 SULF1Q8IWU6 871 aa19.38■□□□□ 0.69
CSMD1-207ENST00000520451 MYH16Q9H6N6 1097 aa19.38■□□□□ 0.69
CSMD1-207ENST00000520451 GBA2Q9HCG7 927 aaPredicted RBP19.38■□□□□ 0.69
CSMD1-207ENST00000520451 MED23Q9ULK4 1368 aa19.38■□□□□ 0.69
CSMD1-207ENST00000520451 SPEF2Q9C093 1822 aa19.37■□□□□ 0.69
CSMD1-207ENST00000520451 VAMP4O75379 141 aa19.37■□□□□ 0.69
CSMD1-207ENST00000520451 CCT4P50991 539 aaKnown RBP19.37■□□□□ 0.69
CSMD1-207ENST00000520451 EXOSC9Q06265 439 aaKnown RBP19.37■□□□□ 0.69
CSMD1-207ENST00000520451 PLA2G12BQ9BX93 195 aa19.37■□□□□ 0.69
CSMD1-207ENST00000520451 TSKSQ9UJT2 592 aa19.37■□□□□ 0.69
CSMD1-207ENST00000520451 USP17L8P0C7I0 530 aa19.36■□□□□ 0.69
CSMD1-207ENST00000520451 ITGA6P23229 1130 aa19.36■□□□□ 0.69
CSMD1-207ENST00000520451 BRPF1P55201 1214 aaPredicted RBP19.36■□□□□ 0.69
CSMD1-207ENST00000520451 CASP7P55210 303 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms