RNA–Protein interactions for RNA: ENST00000519662.5

HMBOX1-207, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-207ENST00000519662 GPC2Q8N158 579 aa13.76□□□□□ -0.21
HMBOX1-207ENST00000519662 TBC1D16Q8TBP0 767 aa13.76□□□□□ -0.21
HMBOX1-207ENST00000519662 ZNF526Q8TF50 670 aaPredicted RBP13.76□□□□□ -0.21
HMBOX1-207ENST00000519662 CCDC85AQ96PX6 553 aaPredicted RBP13.76□□□□□ -0.21
HMBOX1-207ENST00000519662 NMRK2Q9NPI5 230 aa13.76□□□□□ -0.21
HMBOX1-207ENST00000519662 POLLQ9UGP5 575 aa13.76□□□□□ -0.21
HMBOX1-207ENST00000519662 ZNRF3Q9ULT6 936 aa13.76□□□□□ -0.21
HMBOX1-207ENST00000519662 MINPP1Q9UNW1 487 aa13.76□□□□□ -0.21
HMBOX1-207ENST00000519662 ADAMTSL1Q8N6G6 1762 aa13.76□□□□□ -0.21
HMBOX1-207ENST00000519662 POLR2AP24928 1970 aaKnown RBP13.75□□□□□ -0.21
HMBOX1-207ENST00000519662 TOMM70O94826 608 aa13.75□□□□□ -0.21
HMBOX1-207ENST00000519662 TRIM27P14373 513 aa13.75□□□□□ -0.21
HMBOX1-207ENST00000519662 ATP2B4P23634 1241 aa13.75□□□□□ -0.21
HMBOX1-207ENST00000519662 EIF6P56537 245 aaKnown RBP13.75□□□□□ -0.21
HMBOX1-207ENST00000519662 AOC3Q16853 763 aa13.75□□□□□ -0.21
HMBOX1-207ENST00000519662 WASHC4Q2M389 1173 aa13.75□□□□□ -0.21
HMBOX1-207ENST00000519662 SUCLG2Q96I99 432 aa13.75□□□□□ -0.21
HMBOX1-207ENST00000519662 ANKRD2Q9GZV1 360 aa13.75□□□□□ -0.21
HMBOX1-207ENST00000519662 GGA1Q9UJY5 639 aa13.75□□□□□ -0.21
HMBOX1-207ENST00000519662 MYH13Q9UKX3 1938 aa13.74□□□□□ -0.21
HMBOX1-207ENST00000519662 ZNF541Q9H0D2 1346 aa13.74□□□□□ -0.21
HMBOX1-207ENST00000519662 IQCA1LA6NCM1 817 aa13.74□□□□□ -0.21
HMBOX1-207ENST00000519662 POTECB2RU33 542 aa13.74□□□□□ -0.21
HMBOX1-207ENST00000519662 CCDC57Q2TAC2 916 aa13.74□□□□□ -0.21
HMBOX1-207ENST00000519662 ZKSCAN2Q63HK3 967 aa13.74□□□□□ -0.21
HMBOX1-207ENST00000519662 MPHOSPH8Q99549 860 aa13.74□□□□□ -0.21
HMBOX1-207ENST00000519662 ANKIB1Q9P2G1 1089 aa13.74□□□□□ -0.21
HMBOX1-207ENST00000519662 LEMD3Q9Y2U8 911 aa13.74□□□□□ -0.21
HMBOX1-207ENST00000519662 ZNF609O15014 1411 aa13.73□□□□□ -0.21
HMBOX1-207ENST00000519662 MED23Q9ULK4 1368 aa13.73□□□□□ -0.21
HMBOX1-207ENST00000519662 C6orf229H3BNL8 230 aa13.73□□□□□ -0.21
HMBOX1-207ENST00000519662 DDNO94850 711 aaPredicted RBP13.73□□□□□ -0.21
HMBOX1-207ENST00000519662 ANKRD44Q8N8A2 993 aa13.73□□□□□ -0.21
HMBOX1-207ENST00000519662 RBM46Q8TBY0 533 aaKnown RBP13.73□□□□□ -0.21
HMBOX1-207ENST00000519662 BICC1Q9H694 974 aaKnown RBP13.73□□□□□ -0.21
HMBOX1-207ENST00000519662 RRAGCQ9HB90 399 aa13.73□□□□□ -0.21
HMBOX1-207ENST00000519662 UFL1O94874 794 aa13.72□□□□□ -0.21
HMBOX1-207ENST00000519662 GNAI3P08754 354 aa13.72□□□□□ -0.21
HMBOX1-207ENST00000519662 UBTFL1P0CB47 393 aaPredicted RBP13.72□□□□□ -0.21
HMBOX1-207ENST00000519662 C15orf52Q6ZUT6 534 aaKnown RBP13.72□□□□□ -0.21
HMBOX1-207ENST00000519662 ZC3H12CQ9C0D7 883 aaKnown RBP13.72□□□□□ -0.21
HMBOX1-207ENST00000519662 TRPM7Q96QT4 1865 aa13.72□□□□□ -0.21
HMBOX1-207ENST00000519662 CXCL9Q07325 125 aa13.71□□□□□ -0.21
HMBOX1-207ENST00000519662 TNIP1Q15025 636 aa13.71□□□□□ -0.21
HMBOX1-207ENST00000519662 LDHAL6AQ6ZMR3 332 aa13.71□□□□□ -0.21
HMBOX1-207ENST00000519662 FBXO3Q9UK99 471 aa13.71□□□□□ -0.21
HMBOX1-207ENST00000519662 CHMP3Q9Y3E7 222 aa13.71□□□□□ -0.21
HMBOX1-207ENST00000519662 YDJCA8MPS7 323 aa13.7□□□□□ -0.22
HMBOX1-207ENST00000519662 MS4A1P11836 297 aa13.7□□□□□ -0.22
HMBOX1-207ENST00000519662 CHRNDQ07001 517 aa13.7□□□□□ -0.22
HMBOX1-207ENST00000519662 FSTL1Q12841 308 aa13.7□□□□□ -0.22
HMBOX1-207ENST00000519662 CIAPIN1Q6FI81 312 aa13.7□□□□□ -0.22
HMBOX1-207ENST00000519662 PODNQ7Z5L7 613 aa13.7□□□□□ -0.22
HMBOX1-207ENST00000519662 C16orf71Q8IYS4 520 aaPredicted RBP13.7□□□□□ -0.22
HMBOX1-207ENST00000519662 FRAT1Q92837 279 aaPredicted RBP13.7□□□□□ -0.22
HMBOX1-207ENST00000519662 ZNF804BA4D1E1 1349 aa13.69□□□□□ -0.22
HMBOX1-207ENST00000519662 MROH5Q6ZUA9 1318 aa13.69□□□□□ -0.22
HMBOX1-207ENST00000519662 MTX1Q13505 466 aa13.69□□□□□ -0.22
HMBOX1-207ENST00000519662 TAF7LQ5H9L4 462 aa13.69□□□□□ -0.22
HMBOX1-207ENST00000519662 DPF2Q92785 391 aa13.69□□□□□ -0.22
HMBOX1-207ENST00000519662 MEIS3Q99687 375 aa13.69□□□□□ -0.22
HMBOX1-207ENST00000519662 TAF1DQ9H5J8 278 aaPredicted RBP13.69□□□□□ -0.22
HMBOX1-207ENST00000519662 HACL1Q9UJ83 578 aa13.69□□□□□ -0.22
HMBOX1-207ENST00000519662 RIPOR2Q9Y4F9 1068 aa13.69□□□□□ -0.22
HMBOX1-207ENST00000519662 ARAP2Q8WZ64 1704 aa13.69□□□□□ -0.22
HMBOX1-207ENST00000519662 ECM29Q5VYK3 1845 aa13.69□□□□□ -0.22
HMBOX1-207ENST00000519662 IRS2Q9Y4H2 1338 aa13.68□□□□□ -0.22
HMBOX1-207ENST00000519662 RIMBP2O15034 1052 aa13.68□□□□□ -0.22
HMBOX1-207ENST00000519662 ECE2O60344 883 aa13.68□□□□□ -0.22
HMBOX1-207ENST00000519662 RPS12P25398 132 aaKnown RBP13.68□□□□□ -0.22
HMBOX1-207ENST00000519662 RFX5P48382 616 aaPredicted RBP13.68□□□□□ -0.22
HMBOX1-207ENST00000519662 SCNN1DP51172 638 aa13.68□□□□□ -0.22
HMBOX1-207ENST00000519662 PNMA8AQ86V59 439 aaPredicted RBP13.68□□□□□ -0.22
HMBOX1-207ENST00000519662 DZIP1LQ8IYY4 767 aaKnown RBP13.68□□□□□ -0.22
HMBOX1-207ENST00000519662 SMC1BQ8NDV3 1235 aa13.68□□□□□ -0.22
HMBOX1-207ENST00000519662 ZNF594Q96JF6 807 aaPredicted RBP13.68□□□□□ -0.22
HMBOX1-207ENST00000519662 CNNM1Q9NRU3 951 aa13.68□□□□□ -0.22
HMBOX1-207ENST00000519662 LMOD1P29536 600 aaPredicted RBP13.67□□□□□ -0.22
HMBOX1-207ENST00000519662 UBE4AQ14139 1066 aa13.67□□□□□ -0.22
HMBOX1-207ENST00000519662 TMEM57Q8N5G2 664 aa13.67□□□□□ -0.22
HMBOX1-207ENST00000519662 COA1Q9GZY4 146 aa13.67□□□□□ -0.22
HMBOX1-207ENST00000519662 DBNDD1Q9H9R9 158 aa13.67□□□□□ -0.22
HMBOX1-207ENST00000519662 GPRC5DQ9NZD1 345 aa13.67□□□□□ -0.22
HMBOX1-207ENST00000519662 RCAN3Q9UKA8 241 aa13.67□□□□□ -0.22
HMBOX1-207ENST00000519662 LRRFIP2Q9Y608 721 aaKnown RBP13.67□□□□□ -0.22
HMBOX1-207ENST00000519662 CIAO1O76071 339 aa13.66□□□□□ -0.22
HMBOX1-207ENST00000519662 VIL1P09327 827 aaKnown RBP13.66□□□□□ -0.22
HMBOX1-207ENST00000519662 EPHX2P34913 555 aa13.66□□□□□ -0.22
HMBOX1-207ENST00000519662 MMP14P50281 582 aa13.66□□□□□ -0.22
HMBOX1-207ENST00000519662 PTPN12Q05209 780 aaKnown RBP13.66□□□□□ -0.22
HMBOX1-207ENST00000519662 LDHDQ86WU2 507 aa13.66□□□□□ -0.22
HMBOX1-207ENST00000519662 FTSJ3Q8IY81 847 aaKnown RBP13.66□□□□□ -0.22
HMBOX1-207ENST00000519662 CLUAP1Q96AJ1 413 aa13.66□□□□□ -0.22
HMBOX1-207ENST00000519662 GPR101Q96P66 508 aaPredicted RBP13.66□□□□□ -0.22
HMBOX1-207ENST00000519662 TNNQ9UQP3 1299 aa13.66□□□□□ -0.22
HMBOX1-207ENST00000519662 GJA3Q9Y6H8 435 aa13.66□□□□□ -0.22
HMBOX1-207ENST00000519662 WTIPA6NIX2 430 aaPredicted RBP13.65□□□□□ -0.22
HMBOX1-207ENST00000519662 G3V3G9 751 aa13.65□□□□□ -0.22
HMBOX1-207ENST00000519662 EYA2O00167 538 aa13.65□□□□□ -0.22
HMBOX1-207ENST00000519662 PSMD14O00487 310 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms